Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.77□□□□□ -0.05
TRAV25A0A0B4J276 F2R-202ENST00000505600 442 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV25A0A0B4J276 KRT18P16-201ENST00000510337 1294 ntBASIC14.77□□□□□ -0.05
TRAV25A0A0B4J276 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.77□□□□□ -0.05
TRAV25A0A0B4J276 RARRES2P10-201ENST00000564312 460 ntBASIC14.77□□□□□ -0.05
TRAV25A0A0B4J276 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV25A0A0B4J276 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
TRAV25A0A0B4J276 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAV25A0A0B4J276 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV25A0A0B4J276 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV25A0A0B4J276 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV25A0A0B4J276 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TRAV25A0A0B4J276 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV25A0A0B4J276 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV25A0A0B4J276 AL691432.2-201ENST00000607222 2038 ntBASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 NME1-207ENST00000480143 964 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 AP001412.1-201ENST00000608405 714 ntBASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 GOLGA6L3-201ENST00000507199 1679 ntBASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 AL157384.1-201ENST00000445995 2473 ntBASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV25A0A0B4J276 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV25A0A0B4J276 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TRAV25A0A0B4J276 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV25A0A0B4J276 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV25A0A0B4J276 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TRAV25A0A0B4J276 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV25A0A0B4J276 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV25A0A0B4J276 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TRAV25A0A0B4J276 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV25A0A0B4J276 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV25A0A0B4J276 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV25A0A0B4J276 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV25A0A0B4J276 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV25A0A0B4J276 MIR718-201ENST00000390190 70 ntBASIC14.75□□□□□ -0.05
TRAV25A0A0B4J276 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV25A0A0B4J276 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC14.75□□□□□ -0.05
TRAV25A0A0B4J276 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
TRAV25A0A0B4J276 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV25A0A0B4J276 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TRAV25A0A0B4J276 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV25A0A0B4J276 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV25A0A0B4J276 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TRAV25A0A0B4J276 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
TRAV25A0A0B4J276 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV25A0A0B4J276 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV25A0A0B4J276 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV25A0A0B4J276 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV25A0A0B4J276 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV25A0A0B4J276 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms