Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-8A0A0A6YYG3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV6-8A0A0A6YYG3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TRBV6-8A0A0A6YYG3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-8A0A0A6YYG3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC13.66□□□□□ -0.22
TRBV6-8A0A0A6YYG3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-8A0A0A6YYG3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TRBV6-8A0A0A6YYG3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-8A0A0A6YYG3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-8A0A0A6YYG3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
TRBV6-8A0A0A6YYG3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV6-8A0A0A6YYG3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC13.66□□□□□ -0.22
TRBV6-8A0A0A6YYG3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-8A0A0A6YYG3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-8A0A0A6YYG3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV6-8A0A0A6YYG3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV6-8A0A0A6YYG3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV6-8A0A0A6YYG3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC13.66□□□□□ -0.22
TRBV6-8A0A0A6YYG3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC13.66□□□□□ -0.22
TRBV6-8A0A0A6YYG3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC13.66□□□□□ -0.22
TRBV6-8A0A0A6YYG3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-8A0A0A6YYG3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-8A0A0A6YYG3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TRBV6-8A0A0A6YYG3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC13.66□□□□□ -0.22
TRBV6-8A0A0A6YYG3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-8A0A0A6YYG3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-8A0A0A6YYG3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
TRBV6-8A0A0A6YYG3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-8A0A0A6YYG3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC13.65□□□□□ -0.22
TRBV6-8A0A0A6YYG3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC13.65□□□□□ -0.22
TRBV6-8A0A0A6YYG3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-8A0A0A6YYG3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-8A0A0A6YYG3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC13.65□□□□□ -0.22
TRBV6-8A0A0A6YYG3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-8A0A0A6YYG3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRBV6-8A0A0A6YYG3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-8A0A0A6YYG3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC13.65□□□□□ -0.22
TRBV6-8A0A0A6YYG3 AC018445.3-201ENST00000624177 1945 ntBASIC13.65□□□□□ -0.22
TRBV6-8A0A0A6YYG3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC13.65□□□□□ -0.22
TRBV6-8A0A0A6YYG3 MIR935-201ENST00000401179 91 ntBASIC13.65□□□□□ -0.22
TRBV6-8A0A0A6YYG3 AC006970.2-201ENST00000450065 779 ntBASIC13.65□□□□□ -0.22
TRBV6-8A0A0A6YYG3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC13.65□□□□□ -0.22
TRBV6-8A0A0A6YYG3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC13.65□□□□□ -0.22
TRBV6-8A0A0A6YYG3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC13.65□□□□□ -0.22
TRBV6-8A0A0A6YYG3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC13.65□□□□□ -0.22
TRBV6-8A0A0A6YYG3 AC018553.1-201ENST00000616682 1458 ntBASIC13.65□□□□□ -0.22
TRBV6-8A0A0A6YYG3 AC116351.2-201ENST00000606540 1585 ntBASIC13.65□□□□□ -0.22
TRBV6-8A0A0A6YYG3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-8A0A0A6YYG3 BX323043.1-201ENST00000641006 1765 ntBASIC13.65□□□□□ -0.22
TRBV6-8A0A0A6YYG3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
TRBV6-8A0A0A6YYG3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-8A0A0A6YYG3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC13.65□□□□□ -0.22
TRBV6-8A0A0A6YYG3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 Z82202.1-201ENST00000623446 1880 ntBASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 MIPEPP3-201ENST00000412105 444 ntBASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 CROCCP5-201ENST00000436658 830 ntBASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 RAP2CP1-201ENST00000605103 478 ntBASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 AL121832.2-201ENST00000610979 668 ntBASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-8A0A0A6YYG3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
TRBV6-8A0A0A6YYG3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-8A0A0A6YYG3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC13.63□□□□□ -0.23
TRBV6-8A0A0A6YYG3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-8A0A0A6YYG3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-8A0A0A6YYG3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRBV6-8A0A0A6YYG3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-8A0A0A6YYG3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-8A0A0A6YYG3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC13.63□□□□□ -0.23
TRBV6-8A0A0A6YYG3 AC073210.2-201ENST00000430369 194 ntBASIC13.63□□□□□ -0.23
TRBV6-8A0A0A6YYG3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms