Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 LMLN-202ENST00000332636 1812 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 ST5-213ENST00000526757 3019 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 WWP2-201ENST00000356003 4227 ntTSL 2 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 AC020915.2-201ENST00000591325 4227 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 PHTF2-203ENST00000307305 4793 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 PRC1-201ENST00000361188 4087 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 LRP12-202ENST00000424843 4092 ntTSL 2 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 OVCH1-201ENST00000318184 3405 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 ZNF655-204ENST00000394163 4528 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 ZNF181-201ENST00000392232 2791 ntTSL 5 BASIC5.59□□□□□ -1.52
KRTAP3-3Q9BYR6 DDR1-239ENST00000452441 3857 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
KRTAP3-3Q9BYR6 TNPO3-203ENST00000471234 3283 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
KRTAP3-3Q9BYR6 NDUFS1-209ENST00000457011 2171 ntTSL 2 BASIC5.59□□□□□ -1.52
KRTAP3-3Q9BYR6 HM13-204ENST00000398174 3792 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
KRTAP3-3Q9BYR6 KCNV1-202ENST00000524391 6979 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
KRTAP3-3Q9BYR6 CYP11B1-201ENST00000292427 2664 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
KRTAP3-3Q9BYR6 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC5.59□□□□□ -1.52
KRTAP3-3Q9BYR6 PTCH2-203ENST00000447098 4298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
KRTAP3-3Q9BYR6 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
KRTAP3-3Q9BYR6 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
KRTAP3-3Q9BYR6 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC5.59□□□□□ -1.52
KRTAP3-3Q9BYR6 CUL2-203ENST00000374749 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
KRTAP3-3Q9BYR6 GBA-203ENST00000427500 2063 ntTSL 2 BASIC5.59□□□□□ -1.52
KRTAP3-3Q9BYR6 PDCD4-201ENST00000280154 3602 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
KRTAP3-3Q9BYR6 AL139274.2-201ENST00000606274 4127 ntBASIC5.59□□□□□ -1.52
KRTAP3-3Q9BYR6 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.59□□□□□ -1.52
KRTAP3-3Q9BYR6 CENPO-201ENST00000260662 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 SLC7A5-203ENST00000565644 3983 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 ARHGAP17-201ENST00000289968 3461 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 CSPG4P10-202ENST00000612093 3411 ntTSL 2 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 AC018521.7-201ENST00000580282 2927 ntBASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 PSTPIP2-204ENST00000589328 2900 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 CHODL-204ENST00000400128 2421 ntTSL 2 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 ZNF304-203ENST00000443917 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 RIC3-201ENST00000309737 2859 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 NAMPT-201ENST00000222553 4582 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 THAP12P5-201ENST00000405864 2275 ntBASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 SLC16A7-216ENST00000552432 2250 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 SLC13A5-201ENST00000293800 3176 ntTSL 2 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 RIPOR1-201ENST00000042381 4051 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 TMEM170A-201ENST00000357613 4959 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 RHBDL3-203ENST00000536287 4470 ntTSL 2 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 KLK10-201ENST00000309958 3111 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 WDR33-204ENST00000409658 3104 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 TMEM132D-201ENST00000389441 5305 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 RTP2-201ENST00000358241 1346 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 HERC2P4-205ENST00000566902 3957 ntBASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 ECM2-204ENST00000444490 2648 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 AKT1-202ENST00000402615 3913 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 LRIF1-201ENST00000369763 3475 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 AC004264.2-201ENST00000623328 1737 ntBASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 EXD2-201ENST00000312994 5107 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 CDKN2AIPNLP2-201ENST00000274516 352 ntBASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 CDK5-201ENST00000297518 783 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 RNY3P2-201ENST00000362918 102 ntBASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 RNU6-454P-201ENST00000364292 107 ntBASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 RNU6-484P-201ENST00000384016 107 ntBASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 AC004884.1-201ENST00000393647 319 ntBASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 AL512353.1-201ENST00000414798 514 ntTSL 3 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 DDX39BP1-205ENST00000422507 192 ntBASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 AL355574.1-201ENST00000423793 311 ntTSL 5 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 AL008719.1-201ENST00000430449 473 ntTSL 2 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 RTN2-203ENST00000430715 1127 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 AC018511.1-201ENST00000436608 380 ntTSL 5 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 GSTK1-205ENST00000443571 850 ntTSL 2 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 CD59-206ENST00000445143 825 ntAPPRIS P2 TSL 3 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 SURF6P1-201ENST00000451854 827 ntBASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 AL512306.3-201ENST00000453895 683 ntTSL 3 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 AC018638.3-201ENST00000461273 132 ntBASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 RN7SL728P-201ENST00000464718 300 ntBASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 AC107626.1-201ENST00000471084 183 ntBASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 UQCRHP4-201ENST00000471686 272 ntBASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 AL591122.1-201ENST00000487348 492 ntBASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 PDPN-208ENST00000509009 571 ntTSL 4 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 AC245884.7-201ENST00000514037 356 ntBASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 SNORA70.12-201ENST00000516084 153 ntBASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 RNU6-113P-201ENST00000516653 101 ntBASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 RNA5SP471-201ENST00000516971 106 ntBASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 AC011726.2-201ENST00000522547 508 ntTSL 3 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 TMX2-CTNND1-201ENST00000528395 585 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 ACP2-209ENST00000530453 826 ntTSL 2 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms