RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 NISCHQ9Y2I1 1504 aa21.68■■□□□ 1.06
PTCH2-203ENST00000447098 DCAF8L2P0C7V8 631 aa20.71■□□□□ 0.91
PTCH2-203ENST00000447098 SHROOM4Q9ULL8 1493 aa19.79■□□□□ 0.76
PTCH2-203ENST00000447098 SUPT5HO00267 1087 aaKnown RBP19.54■□□□□ 0.72
PTCH2-203ENST00000447098 ABCC9O60706 1549 aa18.65■□□□□ 0.58
PTCH2-203ENST00000447098 EHMT2Q96KQ7 1210 aa18.65■□□□□ 0.58
PTCH2-203ENST00000447098 FAM9AQ8IZU1 332 aaPredicted RBP18.34■□□□□ 0.53
PTCH2-203ENST00000447098 HRCP23327 699 aa18.27■□□□□ 0.51
PTCH2-203ENST00000447098 PABPN1Q86U42 306 aaKnown RBP eCLIP18.23■□□□□ 0.51
PTCH2-203ENST00000447098 PCGF6Q9BYE7 350 aa18.22■□□□□ 0.51
PTCH2-203ENST00000447098 CCDC180Q9P1Z9 1646 aa18.04■□□□□ 0.48
PTCH2-203ENST00000447098 TRIM41Q8WV44 630 aa18.03■□□□□ 0.48
PTCH2-203ENST00000447098 ZCCHC6Q5VYS8 1495 aaKnown RBP18.02■□□□□ 0.47
PTCH2-203ENST00000447098 PPARGC1BQ86YN6 1023 aaKnown RBP17.95■□□□□ 0.46
PTCH2-203ENST00000447098 RANGAP1P46060 587 aaPredicted RBP17.89■□□□□ 0.45
PTCH2-203ENST00000447098 CHIC1Q5VXU3 224 aa17.87■□□□□ 0.45
PTCH2-203ENST00000447098 TTBK1Q5TCY1 1321 aaPredicted RBP17.86■□□□□ 0.45
PTCH2-203ENST00000447098 SCRIBQ14160 1630 aa17.82■□□□□ 0.44
PTCH2-203ENST00000447098 PELP1Q8IZL8 1130 aaKnown RBP17.68■□□□□ 0.42
PTCH2-203ENST00000447098 LOC105371045A0A1W2PR82 267 aa17.66■□□□□ 0.42
PTCH2-203ENST00000447098 MYO15BQ96JP2 1530 aa17.62■□□□□ 0.41
PTCH2-203ENST00000447098 UBTFP17480 764 aaKnown RBP17.62■□□□□ 0.41
PTCH2-203ENST00000447098 TRIM26Q12899 539 aaPredicted RBP17.55■□□□□ 0.4
PTCH2-203ENST00000447098 APLP2Q06481 763 aa17.52■□□□□ 0.4
PTCH2-203ENST00000447098 ZEB1P37275 1124 aaPredicted RBP17.49■□□□□ 0.39
PTCH2-203ENST00000447098 ATP1B4Q9UN42 357 aaPredicted RBP17.44■□□□□ 0.38
PTCH2-203ENST00000447098 RB1CC1Q8TDY2 1594 aa17.39■□□□□ 0.37
PTCH2-203ENST00000447098 DCAF1Q9Y4B6 1507 aa17.34■□□□□ 0.37
PTCH2-203ENST00000447098 NACADO15069 1562 aa17.32■□□□□ 0.36
PTCH2-203ENST00000447098 RSF1Q96T23 1441 aaPredicted RBP17.21■□□□□ 0.35
PTCH2-203ENST00000447098 CECR2Q9BXF3 1484 aa17.2■□□□□ 0.34
PTCH2-203ENST00000447098 SCAF1Q9H7N4 1312 aaKnown RBP17.16■□□□□ 0.34
PTCH2-203ENST00000447098 CENPBP07199 599 aaPredicted RBP17.07■□□□□ 0.32
PTCH2-203ENST00000447098 CCER1Q8TC90 406 aaPredicted RBP17.05■□□□□ 0.32
PTCH2-203ENST00000447098 MYT1Q01538 1121 aa17.03■□□□□ 0.32
PTCH2-203ENST00000447098 ITGAEP38570 1179 aa16.97■□□□□ 0.31
PTCH2-203ENST00000447098 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.93■□□□□ 0.3
PTCH2-203ENST00000447098 HNRNPUL2Q1KMD3 747 aaKnown RBP16.93■□□□□ 0.3
PTCH2-203ENST00000447098 ACIN1Q9UKV3 1341 aaKnown RBP16.92■□□□□ 0.3
PTCH2-203ENST00000447098 MROH2BQ7Z745 1585 aa16.92■□□□□ 0.3
PTCH2-203ENST00000447098 CSRNP3Q8WYN3 585 aa16.91■□□□□ 0.3
PTCH2-203ENST00000447098 FBLN2P98095 1184 aa16.89■□□□□ 0.29
PTCH2-203ENST00000447098 GTF3C3Q9Y5Q9 886 aa16.88■□□□□ 0.29
PTCH2-203ENST00000447098 BAZ1AQ9NRL2 1556 aaPredicted RBP16.85■□□□□ 0.29
PTCH2-203ENST00000447098 DIEXFQ68CQ4 756 aaKnown RBP16.84■□□□□ 0.29
PTCH2-203ENST00000447098 P3H3Q8IVL6 736 aa16.84■□□□□ 0.29
PTCH2-203ENST00000447098 BAZ1BQ9UIG0 1483 aaKnown RBP16.84■□□□□ 0.29
PTCH2-203ENST00000447098 NEUROD1Q13562 356 aa16.83■□□□□ 0.29
PTCH2-203ENST00000447098 YTHDC1Q96MU7 727 aaKnown RBP16.79■□□□□ 0.28
PTCH2-203ENST00000447098 ARID3CA6NKF2 412 aa16.74■□□□□ 0.27
PTCH2-203ENST00000447098 WIZO95785 1651 aa16.7■□□□□ 0.26
PTCH2-203ENST00000447098 CCDC88BA6NC98 1476 aa16.63■□□□□ 0.25
PTCH2-203ENST00000447098 WRNQ14191 1432 aaPredicted RBP eCLIP16.61■□□□□ 0.251e-58■■□□□ 14.4
PTCH2-203ENST00000447098 FAM50AQ14320 339 aaKnown RBP16.6■□□□□ 0.25
PTCH2-203ENST00000447098 MYT1LQ9UL68 1186 aa16.55■□□□□ 0.24
PTCH2-203ENST00000447098 ABCC8Q09428 1581 aa16.53■□□□□ 0.24
PTCH2-203ENST00000447098 ZNF316A6NFI3 1004 aaPredicted RBP16.49■□□□□ 0.23
PTCH2-203ENST00000447098 ATAD2BQ9ULI0 1458 aa16.49■□□□□ 0.23
PTCH2-203ENST00000447098 SMARCA4P51532 1647 aa16.49■□□□□ 0.23
PTCH2-203ENST00000447098 SOGA1O94964 1423 aa16.47■□□□□ 0.23
PTCH2-203ENST00000447098 SMARCA2P51531 1590 aa16.44■□□□□ 0.22
PTCH2-203ENST00000447098 TOP2AP11388 1531 aaKnown RBP16.42■□□□□ 0.22
PTCH2-203ENST00000447098 CHMP7Q8WUX9 453 aaPredicted RBP16.35■□□□□ 0.21
PTCH2-203ENST00000447098 CLIP1P30622 1438 aa16.34■□□□□ 0.21
PTCH2-203ENST00000447098 ERCC6Q03468 1493 aa16.32■□□□□ 0.2
PTCH2-203ENST00000447098 CEP162Q5TB80 1403 aa16.32■□□□□ 0.2
PTCH2-203ENST00000447098 KIF27Q86VH2 1401 aa16.31■□□□□ 0.2
PTCH2-203ENST00000447098 TRIM52Q96A61 297 aa16.3■□□□□ 0.2
PTCH2-203ENST00000447098 ZNF777Q9ULD5 760 aaPredicted RBP16.3■□□□□ 0.2
PTCH2-203ENST00000447098 MIER1Q8N108 512 aa16.29■□□□□ 0.2
PTCH2-203ENST00000447098 CUX2O14529 1486 aa16.28■□□□□ 0.2
PTCH2-203ENST00000447098 GOLGA3Q08378 1498 aa16.28■□□□□ 0.2
PTCH2-203ENST00000447098 CADPSQ9ULU8 1353 aa16.26■□□□□ 0.19
PTCH2-203ENST00000447098 EEA1Q15075 1411 aa16.26■□□□□ 0.19
PTCH2-203ENST00000447098 CNGB1Q14028 1251 aaPredicted RBP16.25■□□□□ 0.19
PTCH2-203ENST00000447098 POLR3GLQ9BT43 218 aa16.24■□□□□ 0.19
PTCH2-203ENST00000447098 EIF4G1Q04637 1599 aaKnown RBP16.24■□□□□ 0.19
PTCH2-203ENST00000447098 TDRD9Q8NDG6 1382 aaKnown RBP16.24■□□□□ 0.19
PTCH2-203ENST00000447098 DNAJC5BQ9UF47 199 aa16.21■□□□□ 0.19
PTCH2-203ENST00000447098 RUSC2Q8N2Y8 1516 aa16.21■□□□□ 0.18
PTCH2-203ENST00000447098 BICRAQ9NZM4 1560 aa16.21■□□□□ 0.18
PTCH2-203ENST00000447098 CEP164Q9UPV0 1460 aa16.19■□□□□ 0.18
PTCH2-203ENST00000447098 TNIKQ9UKE5 1360 aa16.18■□□□□ 0.18
PTCH2-203ENST00000447098 CARMIL1Q5VZK9 1371 aa16.16■□□□□ 0.18
PTCH2-203ENST00000447098 CHIC2Q9UKJ5 165 aa16.15■□□□□ 0.18
PTCH2-203ENST00000447098 PDS5BQ9NTI5 1447 aa16.14■□□□□ 0.17
PTCH2-203ENST00000447098 CDK11AQ9UQ88 783 aaPredicted RBP16.11■□□□□ 0.17
PTCH2-203ENST00000447098 NCAPD3P42695 1498 aa16.11■□□□□ 0.17
PTCH2-203ENST00000447098 MTUS2Q5JR59 1369 aa16.09■□□□□ 0.17
PTCH2-203ENST00000447098 ZNF326Q5BKZ1 582 aaKnown RBP16.09■□□□□ 0.17
PTCH2-203ENST00000447098 FANCD2Q9BXW9 1451 aa16.07■□□□□ 0.16
PTCH2-203ENST00000447098 NESP48681 1621 aa16.04■□□□□ 0.16
PTCH2-203ENST00000447098 KCNH8Q96L42 1107 aa16.03■□□□□ 0.16
PTCH2-203ENST00000447098 UNC13AQ9UPW8 1703 aa16.03■□□□□ 0.16
PTCH2-203ENST00000447098 CLSPNQ9HAW4 1339 aa16.02■□□□□ 0.15
PTCH2-203ENST00000447098 CC2D2AQ9P2K1 1620 aa16.01■□□□□ 0.15
PTCH2-203ENST00000447098 RAPGEF2Q9Y4G8 1499 aa16.01■□□□□ 0.15
PTCH2-203ENST00000447098 BCANQ96GW7 911 aa15.99■□□□□ 0.15
PTCH2-203ENST00000447098 NEFLP07196 543 aa15.98■□□□□ 0.15
PTCH2-203ENST00000447098 SUPT16HQ9Y5B9 1047 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms