Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 GAPDHP39-201ENST00000481866 979 ntBASIC8.66□□□□□ -1.02
VARS2Q5ST30 AC108078.3-201ENST00000502633 489 ntBASIC8.66□□□□□ -1.02
VARS2Q5ST30 AC112203.1-201ENST00000506315 1020 ntBASIC8.66□□□□□ -1.02
VARS2Q5ST30 NR1I3-226ENST00000508740 977 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
VARS2Q5ST30 MTCO3P44-201ENST00000510977 541 ntBASIC8.66□□□□□ -1.02
VARS2Q5ST30 RN7SKP14-201ENST00000516000 329 ntBASIC8.66□□□□□ -1.02
VARS2Q5ST30 RNU2-53P-201ENST00000516257 147 ntBASIC8.66□□□□□ -1.02
VARS2Q5ST30 SNORA40.12-201ENST00000516329 111 ntBASIC8.66□□□□□ -1.02
VARS2Q5ST30 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC8.66□□□□□ -1.02
VARS2Q5ST30 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC8.66□□□□□ -1.02
VARS2Q5ST30 MIR4793-201ENST00000577502 87 ntBASIC8.66□□□□□ -1.02
VARS2Q5ST30 RN7SL376P-201ENST00000578594 264 ntBASIC8.66□□□□□ -1.02
VARS2Q5ST30 AC010719.1-201ENST00000602992 747 ntBASIC8.66□□□□□ -1.02
VARS2Q5ST30 AC112187.2-201ENST00000604345 283 ntBASIC8.66□□□□□ -1.02
VARS2Q5ST30 AL096712.1-201ENST00000614561 159 ntBASIC8.66□□□□□ -1.02
VARS2Q5ST30 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC8.66□□□□□ -1.02
VARS2Q5ST30 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC8.66□□□□□ -1.02
VARS2Q5ST30 AC106875.2-201ENST00000617634 596 ntTSL 2 BASIC8.66□□□□□ -1.02
VARS2Q5ST30 AC009318.4-201ENST00000620496 486 ntBASIC8.66□□□□□ -1.02
VARS2Q5ST30 NECAP1-210ENST00000638237 2517 ntAPPRIS ALT1 TSL 5 BASIC8.66□□□□□ -1.02
VARS2Q5ST30 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
VARS2Q5ST30 IL18R1-201ENST00000233957 3661 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
VARS2Q5ST30 ZCCHC11-204ENST00000371544 5858 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
VARS2Q5ST30 BRCA1-208ENST00000468300 3273 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
VARS2Q5ST30 NASP-201ENST00000350030 3207 ntAPPRIS P4 TSL 1 (best) BASIC8.66□□□□□ -1.02
VARS2Q5ST30 AP001528.3-201ENST00000624364 3249 ntBASIC8.66□□□□□ -1.02
VARS2Q5ST30 APH1B-201ENST00000261879 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
VARS2Q5ST30 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
VARS2Q5ST30 MSL3P1-201ENST00000438684 2032 ntTSL 2 BASIC8.66□□□□□ -1.02
VARS2Q5ST30 TAF1A-201ENST00000350027 1966 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
VARS2Q5ST30 RAD21L1-203ENST00000409241 1808 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
VARS2Q5ST30 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
VARS2Q5ST30 PSMC2-201ENST00000292644 2637 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
VARS2Q5ST30 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
VARS2Q5ST30 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
VARS2Q5ST30 XIRP2-206ENST00000409728 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
VARS2Q5ST30 UBE2V1-223ENST00000617119 2432 ntTSL 4 BASIC8.65□□□□□ -1.02
VARS2Q5ST30 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC8.65□□□□□ -1.02
VARS2Q5ST30 AC114324.1-201ENST00000504077 3152 ntBASIC8.65□□□□□ -1.02
VARS2Q5ST30 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
VARS2Q5ST30 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
VARS2Q5ST30 Z97200.1-201ENST00000606154 2045 ntBASIC8.65□□□□□ -1.02
VARS2Q5ST30 CCDC15-201ENST00000344762 3893 ntAPPRIS P2 TSL 5 BASIC8.65□□□□□ -1.02
VARS2Q5ST30 LPL-201ENST00000311322 3846 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
VARS2Q5ST30 RPL7P26-201ENST00000333817 754 ntBASIC8.65□□□□□ -1.02
VARS2Q5ST30 RN7SKP1-201ENST00000365525 307 ntBASIC8.65□□□□□ -1.02
VARS2Q5ST30 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
VARS2Q5ST30 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC8.65□□□□□ -1.02
VARS2Q5ST30 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC8.65□□□□□ -1.02
VARS2Q5ST30 OR10T1P-201ENST00000424327 947 ntBASIC8.65□□□□□ -1.02
VARS2Q5ST30 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC8.65□□□□□ -1.02
VARS2Q5ST30 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC8.65□□□□□ -1.02
VARS2Q5ST30 AC009237.4-201ENST00000441078 238 ntBASIC8.65□□□□□ -1.02
VARS2Q5ST30 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC8.65□□□□□ -1.02
VARS2Q5ST30 FANK1-AS1-201ENST00000445458 428 ntTSL 3 BASIC8.65□□□□□ -1.02
VARS2Q5ST30 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC8.65□□□□□ -1.02
VARS2Q5ST30 H3F3AP5-201ENST00000475267 429 ntBASIC8.65□□□□□ -1.02
VARS2Q5ST30 AF305872.1-201ENST00000485217 471 ntBASIC8.65□□□□□ -1.02
VARS2Q5ST30 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC8.65□□□□□ -1.02
VARS2Q5ST30 AC107385.1-201ENST00000507985 778 ntBASIC8.65□□□□□ -1.02
VARS2Q5ST30 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC8.65□□□□□ -1.02
VARS2Q5ST30 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC8.65□□□□□ -1.02
VARS2Q5ST30 OR7E1P-201ENST00000533891 958 ntBASIC8.65□□□□□ -1.02
VARS2Q5ST30 AP003174.3-201ENST00000537926 516 ntBASIC8.65□□□□□ -1.02
VARS2Q5ST30 LINC02318-202ENST00000556346 715 ntTSL 3 BASIC8.65□□□□□ -1.02
VARS2Q5ST30 HERC2P5-201ENST00000562687 3825 ntBASIC8.65□□□□□ -1.02
VARS2Q5ST30 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC8.65□□□□□ -1.02
VARS2Q5ST30 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC8.65□□□□□ -1.02
VARS2Q5ST30 AC018889.1-201ENST00000605372 397 ntBASIC8.65□□□□□ -1.02
VARS2Q5ST30 AC243773.3-201ENST00000613270 256 ntBASIC8.65□□□□□ -1.02
VARS2Q5ST30 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC8.65□□□□□ -1.02
VARS2Q5ST30 AC024580.1-201ENST00000623020 674 ntBASIC8.65□□□□□ -1.02
VARS2Q5ST30 ENSA-215ENST00000638926 360 ntTSL 5 BASIC8.65□□□□□ -1.02
VARS2Q5ST30 LDHA-201ENST00000227157 1887 ntTSL 3 BASIC8.65□□□□□ -1.02
VARS2Q5ST30 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
VARS2Q5ST30 CEACAM7-201ENST00000006724 2489 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
VARS2Q5ST30 UTP23-201ENST00000309822 3699 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
VARS2Q5ST30 SLFN12-206ENST00000452764 2423 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
VARS2Q5ST30 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
VARS2Q5ST30 ZKSCAN3-202ENST00000341464 1794 ntTSL 2 BASIC8.65□□□□□ -1.02
VARS2Q5ST30 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
VARS2Q5ST30 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC8.65□□□□□ -1.02
VARS2Q5ST30 SCNN1G-201ENST00000300061 3507 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
VARS2Q5ST30 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
VARS2Q5ST30 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
VARS2Q5ST30 C9orf131-205ENST00000421362 3259 ntAPPRIS ALT2 TSL 4 BASIC8.65□□□□□ -1.03
VARS2Q5ST30 MAGEC1-201ENST00000285879 4270 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
VARS2Q5ST30 ZBTB18-202ENST00000622512 3740 ntAPPRIS ALT1 TSL 3 BASIC8.65□□□□□ -1.03
VARS2Q5ST30 MELK-208ENST00000536987 2125 ntTSL 2 BASIC8.65□□□□□ -1.03
VARS2Q5ST30 CYP2C8-211ENST00000539050 2024 ntTSL 3 BASIC8.64□□□□□ -1.03
VARS2Q5ST30 ZNF331-216ENST00000511593 1985 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
VARS2Q5ST30 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
VARS2Q5ST30 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC8.64□□□□□ -1.03
VARS2Q5ST30 AC007342.7-201ENST00000624610 2337 ntBASIC8.64□□□□□ -1.03
VARS2Q5ST30 ZNF610-207ENST00000601151 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
VARS2Q5ST30 WDR11-AS1-203ENST00000598981 2242 ntTSL 5 BASIC8.64□□□□□ -1.03
VARS2Q5ST30 ZNF441-201ENST00000357901 4356 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
VARS2Q5ST30 ADIPOQ-AS1-201ENST00000422718 3443 ntTSL 5 BASIC8.64□□□□□ -1.03
VARS2Q5ST30 RNU5D-1-201ENST00000363299 116 ntBASIC8.64□□□□□ -1.03
VARS2Q5ST30 Y_RNA.455-201ENST00000384230 98 ntBASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms