RNA–Protein interactions for RNA: ENST00000363299.1

RNU5D-1-201, Transcript of RNA, U5D small nuclear 1, humanhuman

BASIC

Gene RNU5D-1, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU5D-1-201ENST00000363299 AEBP2Q6ZN18 517 aaPredicted RBP19.11■□□□□ 0.65
RNU5D-1-201ENST00000363299 CHIC1Q5VXU3 224 aa19.02■□□□□ 0.64
RNU5D-1-201ENST00000363299 PHF23Q9BUL5 403 aaPredicted RBP16.7■□□□□ 0.26
RNU5D-1-201ENST00000363299 SENP3Q9H4L4 574 aaPredicted RBP16.25■□□□□ 0.19
RNU5D-1-201ENST00000363299 PLPPR3Q6T4P5 718 aa15.61■□□□□ 0.09
RNU5D-1-201ENST00000363299 FOXD1Q16676 465 aa14.97□□□□□ -0.01
RNU5D-1-201ENST00000363299 ADRA2BP18089 450 aa14.64□□□□□ -0.07
RNU5D-1-201ENST00000363299 PPP6R1Q9UPN7 881 aa14.61□□□□□ -0.07
RNU5D-1-201ENST00000363299 PIAS4Q8N2W9 510 aaPredicted RBP14.25□□□□□ -0.13
RNU5D-1-201ENST00000363299 KCNA4P22459 653 aa13.79□□□□□ -0.2
RNU5D-1-201ENST00000363299 MSH5O43196 834 aa13.76□□□□□ -0.21
RNU5D-1-201ENST00000363299 PPP4R3CPQ6ZMV5 832 aa13.76□□□□□ -0.21
RNU5D-1-201ENST00000363299 NCBP3Q53F19 620 aaKnown RBP13.55□□□□□ -0.24
RNU5D-1-201ENST00000363299 SCAF1Q9H7N4 1312 aaKnown RBP13.47□□□□□ -0.25
RNU5D-1-201ENST00000363299 CNKSR2Q8WXI2 1034 aa13.33□□□□□ -0.28
RNU5D-1-201ENST00000363299 NPM3O75607 178 aaKnown RBP13.29□□□□□ -0.28
RNU5D-1-201ENST00000363299 SLC4A1APQ9BWU0 796 aaKnown RBP13.22□□□□□ -0.29
RNU5D-1-201ENST00000363299 EHMT2Q96KQ7 1210 aa13.2□□□□□ -0.3
RNU5D-1-201ENST00000363299 MAPK8IP2Q13387 824 aaPredicted RBP13.16□□□□□ -0.3
RNU5D-1-201ENST00000363299 RNF216Q9NWF9 866 aaPredicted RBP13□□□□□ -0.33
RNU5D-1-201ENST00000363299 DMRT2Q9Y5R5 561 aa13□□□□□ -0.33
RNU5D-1-201ENST00000363299 DNAJC5BQ9UF47 199 aa12.9□□□□□ -0.34
RNU5D-1-201ENST00000363299 CSRNP3Q8WYN3 585 aa12.86□□□□□ -0.35
RNU5D-1-201ENST00000363299 HOXD11P31277 338 aaPredicted RBP12.85□□□□□ -0.35
RNU5D-1-201ENST00000363299 ZBTB22O15209 634 aa12.69□□□□□ -0.38
RNU5D-1-201ENST00000363299 FOXD4L1Q9NU39 408 aa12.65□□□□□ -0.38
RNU5D-1-201ENST00000363299 SLC4A2P04920 1241 aa12.45□□□□□ -0.42
RNU5D-1-201ENST00000363299 DCAF8L1A6NGE4 600 aa12.42□□□□□ -0.42
RNU5D-1-201ENST00000363299 MYCNP04198 464 aaPredicted RBP12.33□□□□□ -0.44
RNU5D-1-201ENST00000363299 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.26□□□□□ -0.45
RNU5D-1-201ENST00000363299 ATXN8OSP0DMR3 200 aa12.19□□□□□ -0.46
RNU5D-1-201ENST00000363299 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.11□□□□□ -0.47
RNU5D-1-201ENST00000363299 HNRNPUL2Q1KMD3 747 aaKnown RBP12.11□□□□□ -0.47
RNU5D-1-201ENST00000363299 U3KPZ7 1027 aaPredicted RBP12.07□□□□□ -0.48
RNU5D-1-201ENST00000363299 SAMD1Q6SPF0 538 aaPredicted RBP12.06□□□□□ -0.48
RNU5D-1-201ENST00000363299 APLP2Q06481 763 aa11.93□□□□□ -0.5
RNU5D-1-201ENST00000363299 POTEDQ86YR6 584 aa11.92□□□□□ -0.5
RNU5D-1-201ENST00000363299 ATF5Q9Y2D1 282 aaPredicted RBP11.88□□□□□ -0.51
RNU5D-1-201ENST00000363299 RNF39Q9H2S5 420 aa11.79□□□□□ -0.52
RNU5D-1-201ENST00000363299 ZNF219Q9P2Y4 722 aaPredicted RBP11.71□□□□□ -0.53
RNU5D-1-201ENST00000363299 C1QBPQ07021 282 aaKnown RBP11.68□□□□□ -0.54
RNU5D-1-201ENST00000363299 FKBP8Q14318 412 aa11.65□□□□□ -0.54
RNU5D-1-201ENST00000363299 SPINK5Q9NQ38 1064 aaPredicted RBP11.62□□□□□ -0.55
RNU5D-1-201ENST00000363299 CAPN15O75808 1086 aa11.6□□□□□ -0.55
RNU5D-1-201ENST00000363299 TRHP20396 242 aaPredicted RBP11.6□□□□□ -0.55
RNU5D-1-201ENST00000363299 POLA2Q14181 598 aa11.47□□□□□ -0.57
RNU5D-1-201ENST00000363299 FBLN2P98095 1184 aa11.46□□□□□ -0.57
RNU5D-1-201ENST00000363299 MKRN4PQ13434 485 aaPredicted RBP11.41□□□□□ -0.58
RNU5D-1-201ENST00000363299 ZBTB12Q9Y330 459 aaPredicted RBP11.41□□□□□ -0.58
RNU5D-1-201ENST00000363299 ABCB7O75027 752 aa11.39□□□□□ -0.59
RNU5D-1-201ENST00000363299 SPDYE4A6NLX3 237 aa11.34□□□□□ -0.59
RNU5D-1-201ENST00000363299 DSG3P32926 999 aa11.31□□□□□ -0.6
RNU5D-1-201ENST00000363299 CACNB1Q02641 598 aaPredicted RBP11.25□□□□□ -0.61
RNU5D-1-201ENST00000363299 AMER1Q5JTC6 1135 aaPredicted RBP11.22□□□□□ -0.61
RNU5D-1-201ENST00000363299 PROM2Q8N271 834 aa11.2□□□□□ -0.62
RNU5D-1-201ENST00000363299 FBXO3Q9UK99 471 aa11.19□□□□□ -0.62
RNU5D-1-201ENST00000363299 RTN4Q9NQC3 1192 aaKnown RBP11.13□□□□□ -0.63
RNU5D-1-201ENST00000363299 OSCARQ8IYS5 282 aa11.12□□□□□ -0.63
RNU5D-1-201ENST00000363299 SPDYE2BA6NHP3 402 aa11.08□□□□□ -0.64
RNU5D-1-201ENST00000363299 SPDYE6P0CI01 402 aa11.08□□□□□ -0.64
RNU5D-1-201ENST00000363299 SPDYE2Q495Y8 402 aa11.08□□□□□ -0.64
RNU5D-1-201ENST00000363299 ZNF692Q9BU19 519 aaPredicted RBP11.05□□□□□ -0.64
RNU5D-1-201ENST00000363299 SSUH2Q9Y2M2 353 aa11.02□□□□□ -0.65
RNU5D-1-201ENST00000363299 VASPP50552 380 aaPredicted RBP11.01□□□□□ -0.65
RNU5D-1-201ENST00000363299 PABPN1Q86U42 306 aaKnown RBP eCLIP10.92□□□□□ -0.66
RNU5D-1-201ENST00000363299 STAG3Q9UJ98 1225 aa10.87□□□□□ -0.67
RNU5D-1-201ENST00000363299 IFNLR1Q8IU57 520 aaPredicted RBP10.84□□□□□ -0.67
RNU5D-1-201ENST00000363299 RBM42Q9BTD8 480 aaKnown RBP10.84□□□□□ -0.67
RNU5D-1-201ENST00000363299 PLCD3Q8N3E9 789 aa10.76□□□□□ -0.69
RNU5D-1-201ENST00000363299 KLHL34Q8N239 644 aa10.73□□□□□ -0.69
RNU5D-1-201ENST00000363299 AKT1S1Q96B36 256 aa10.73□□□□□ -0.69
RNU5D-1-201ENST00000363299 PLEKHG5O94827 1062 aa10.7□□□□□ -0.7
RNU5D-1-201ENST00000363299 MIER1Q8N108 512 aa10.7□□□□□ -0.7
RNU5D-1-201ENST00000363299 SPOCK2Q92563 424 aa10.7□□□□□ -0.7
RNU5D-1-201ENST00000363299 SPDYE1Q8NFV5 336 aaPredicted RBP10.68□□□□□ -0.7
RNU5D-1-201ENST00000363299 ZBTB47Q9UFB7 747 aaPredicted RBP10.66□□□□□ -0.7
RNU5D-1-201ENST00000363299 SLC24A1O60721 1099 aa10.62□□□□□ -0.71
RNU5D-1-201ENST00000363299 REM2Q8IYK8 340 aaPredicted RBP10.61□□□□□ -0.71
RNU5D-1-201ENST00000363299 PKD2Q13563 968 aa10.6□□□□□ -0.71
RNU5D-1-201ENST00000363299 CLEC11AQ9Y240 323 aa10.58□□□□□ -0.72
RNU5D-1-201ENST00000363299 DCAF8L2P0C7V8 631 aa10.54□□□□□ -0.72
RNU5D-1-201ENST00000363299 PRR29P0C7W0 189 aa10.54□□□□□ -0.72
RNU5D-1-201ENST00000363299 ECM2O94769 699 aaPredicted RBP10.51□□□□□ -0.73
RNU5D-1-201ENST00000363299 PITPNM1O00562 1244 aa10.49□□□□□ -0.73
RNU5D-1-201ENST00000363299 CREBZFQ9NS37 354 aa10.46□□□□□ -0.73
RNU5D-1-201ENST00000363299 CIZ1Q9ULV3 898 aaPredicted RBP10.46□□□□□ -0.73
RNU5D-1-201ENST00000363299 TRIM41Q8WV44 630 aa10.43□□□□□ -0.74
RNU5D-1-201ENST00000363299 GSE1Q14687 1217 aa10.41□□□□□ -0.74
RNU5D-1-201ENST00000363299 NUBP1P53384 320 aa10.39□□□□□ -0.75
RNU5D-1-201ENST00000363299 MNX1P50219 401 aaPredicted RBP10.38□□□□□ -0.75
RNU5D-1-201ENST00000363299 RGL2O15211 777 aa10.37□□□□□ -0.75
RNU5D-1-201ENST00000363299 FAM212AQ96EL1 285 aa10.37□□□□□ -0.75
RNU5D-1-201ENST00000363299 NPM1P06748 294 aaKnown RBP eCLIP10.34□□□□□ -0.75
RNU5D-1-201ENST00000363299 PLCB2Q00722 1185 aa10.34□□□□□ -0.75
RNU5D-1-201ENST00000363299 DCAF8Q5TAQ9 597 aa10.32□□□□□ -0.76
RNU5D-1-201ENST00000363299 RASEFQ8IZ41 740 aa10.28□□□□□ -0.76
RNU5D-1-201ENST00000363299 CHADLQ6NUI6 762 aa10.27□□□□□ -0.77
RNU5D-1-201ENST00000363299 BBXQ8WY36 941 aaPredicted RBP10.27□□□□□ -0.77
RNU5D-1-201ENST00000363299 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.27□□□□□ -0.77
RNU5D-1-201ENST00000363299 TAOK2Q9UL54 1235 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms