RNA–Protein interactions for RNA: ENST00000516257.1

RNU2-53P-201, Transcript of RNA, U2 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU2-53P, Length 147 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-53P-201ENST00000516257 AEBP2Q6ZN18 517 aaPredicted RBP19.97■□□□□ 0.79
RNU2-53P-201ENST00000516257 CHIC1Q5VXU3 224 aa18.69■□□□□ 0.58
RNU2-53P-201ENST00000516257 SENP3Q9H4L4 574 aaPredicted RBP16.99■□□□□ 0.31
RNU2-53P-201ENST00000516257 PHF23Q9BUL5 403 aaPredicted RBP16.76■□□□□ 0.27
RNU2-53P-201ENST00000516257 FOXD1Q16676 465 aa15.92■□□□□ 0.14
RNU2-53P-201ENST00000516257 POTEDQ86YR6 584 aa15.02■□□□□ -0
RNU2-53P-201ENST00000516257 MSH5O43196 834 aa14.92□□□□□ -0.02
RNU2-53P-201ENST00000516257 PIAS4Q8N2W9 510 aaPredicted RBP14.81□□□□□ -0.04
RNU2-53P-201ENST00000516257 PLPPR3Q6T4P5 718 aa14.8□□□□□ -0.04
RNU2-53P-201ENST00000516257 PPP6R1Q9UPN7 881 aa14.72□□□□□ -0.05
RNU2-53P-201ENST00000516257 ADRA2BP18089 450 aa14.66□□□□□ -0.06
RNU2-53P-201ENST00000516257 MAPK8IP2Q13387 824 aaPredicted RBP13.54□□□□□ -0.24
RNU2-53P-201ENST00000516257 DMRT2Q9Y5R5 561 aa13.45□□□□□ -0.26
RNU2-53P-201ENST00000516257 SCAF1Q9H7N4 1312 aaKnown RBP13.31□□□□□ -0.28
RNU2-53P-201ENST00000516257 CACNB1Q02641 598 aaPredicted RBP12.97□□□□□ -0.33
RNU2-53P-201ENST00000516257 PPP4R3CPQ6ZMV5 832 aa12.97□□□□□ -0.33
RNU2-53P-201ENST00000516257 DCAF8L1A6NGE4 600 aa12.93□□□□□ -0.34
RNU2-53P-201ENST00000516257 HOXD11P31277 338 aaPredicted RBP12.86□□□□□ -0.35
RNU2-53P-201ENST00000516257 CNKSR2Q8WXI2 1034 aa12.75□□□□□ -0.37
RNU2-53P-201ENST00000516257 RNF39Q9H2S5 420 aa12.75□□□□□ -0.37
RNU2-53P-201ENST00000516257 RNF216Q9NWF9 866 aaPredicted RBP12.7□□□□□ -0.38
RNU2-53P-201ENST00000516257 C1QBPQ07021 282 aaKnown RBP12.51□□□□□ -0.41
RNU2-53P-201ENST00000516257 DNAJC5BQ9UF47 199 aa12.41□□□□□ -0.42
RNU2-53P-201ENST00000516257 NCBP3Q53F19 620 aaKnown RBP12.34□□□□□ -0.43
RNU2-53P-201ENST00000516257 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.25□□□□□ -0.45
RNU2-53P-201ENST00000516257 NPM3O75607 178 aaKnown RBP12.24□□□□□ -0.45
RNU2-53P-201ENST00000516257 U3KPZ7 1027 aaPredicted RBP12.01□□□□□ -0.49
RNU2-53P-201ENST00000516257 SPINK5Q9NQ38 1064 aaPredicted RBP11.92□□□□□ -0.5
RNU2-53P-201ENST00000516257 CAPN15O75808 1086 aa11.88□□□□□ -0.51
RNU2-53P-201ENST00000516257 DSG3P32926 999 aa11.87□□□□□ -0.51
RNU2-53P-201ENST00000516257 KCNA4P22459 653 aa11.82□□□□□ -0.52
RNU2-53P-201ENST00000516257 SLC4A2P04920 1241 aa11.76□□□□□ -0.53
RNU2-53P-201ENST00000516257 POTEHQ6S545 545 aa11.71□□□□□ -0.53
RNU2-53P-201ENST00000516257 TRHP20396 242 aaPredicted RBP11.64□□□□□ -0.55
RNU2-53P-201ENST00000516257 ABCB7O75027 752 aa11.62□□□□□ -0.55
RNU2-53P-201ENST00000516257 ZNF219Q9P2Y4 722 aaPredicted RBP11.57□□□□□ -0.56
RNU2-53P-201ENST00000516257 APLP2Q06481 763 aa11.55□□□□□ -0.56
RNU2-53P-201ENST00000516257 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.49□□□□□ -0.57
RNU2-53P-201ENST00000516257 HNRNPUL2Q1KMD3 747 aaKnown RBP11.49□□□□□ -0.57
RNU2-53P-201ENST00000516257 SAMD1Q6SPF0 538 aaPredicted RBP11.44□□□□□ -0.58
RNU2-53P-201ENST00000516257 MYCNP04198 464 aaPredicted RBP11.3□□□□□ -0.6
RNU2-53P-201ENST00000516257 RBM42Q9BTD8 480 aaKnown RBP11.28□□□□□ -0.6
RNU2-53P-201ENST00000516257 POLA2Q14181 598 aa11.26□□□□□ -0.61
RNU2-53P-201ENST00000516257 CHRDL2Q6WN34 429 aa11.16□□□□□ -0.62
RNU2-53P-201ENST00000516257 ATF5Q9Y2D1 282 aaPredicted RBP11.12□□□□□ -0.63
RNU2-53P-201ENST00000516257 SLC4A1APQ9BWU0 796 aaKnown RBP11.08□□□□□ -0.64
RNU2-53P-201ENST00000516257 FOXD4L1Q9NU39 408 aa11.06□□□□□ -0.64
RNU2-53P-201ENST00000516257 AKT1S1Q96B36 256 aa10.98□□□□□ -0.65
RNU2-53P-201ENST00000516257 OSCARQ8IYS5 282 aa10.95□□□□□ -0.66
RNU2-53P-201ENST00000516257 ZBTB12Q9Y330 459 aaPredicted RBP10.95□□□□□ -0.66
RNU2-53P-201ENST00000516257 REM2Q8IYK8 340 aaPredicted RBP10.91□□□□□ -0.66
RNU2-53P-201ENST00000516257 ZBTB22O15209 634 aa10.88□□□□□ -0.67
RNU2-53P-201ENST00000516257 PIP4P2Q8N4L2 257 aa10.86□□□□□ -0.67
RNU2-53P-201ENST00000516257 SP7Q8TDD2 431 aaPredicted RBP10.86□□□□□ -0.67
RNU2-53P-201ENST00000516257 PITPNM1O00562 1244 aa10.81□□□□□ -0.68
RNU2-53P-201ENST00000516257 FXR2P51116 673 aaKnown RBP eCLIP10.74□□□□□ -0.69
RNU2-53P-201ENST00000516257 HAX1O00165 279 aa10.71□□□□□ -0.69
RNU2-53P-201ENST00000516257 ATXN8OSP0DMR3 200 aa10.69□□□□□ -0.7
RNU2-53P-201ENST00000516257 SPDYE2BA6NHP3 402 aa10.63□□□□□ -0.71
RNU2-53P-201ENST00000516257 SPDYE6P0CI01 402 aa10.63□□□□□ -0.71
RNU2-53P-201ENST00000516257 SPDYE2Q495Y8 402 aa10.63□□□□□ -0.71
RNU2-53P-201ENST00000516257 EVX2Q03828 476 aa10.62□□□□□ -0.71
RNU2-53P-201ENST00000516257 FBLN2P98095 1184 aa10.61□□□□□ -0.71
RNU2-53P-201ENST00000516257 MKRN4PQ13434 485 aaPredicted RBP10.58□□□□□ -0.72
RNU2-53P-201ENST00000516257 CLEC11AQ9Y240 323 aa10.53□□□□□ -0.72
RNU2-53P-201ENST00000516257 PRKAR2AP13861 404 aaKnown RBP10.52□□□□□ -0.73
RNU2-53P-201ENST00000516257 SPDYE1Q8NFV5 336 aaPredicted RBP10.5□□□□□ -0.73
RNU2-53P-201ENST00000516257 SSUH2Q9Y2M2 353 aa10.49□□□□□ -0.73
RNU2-53P-201ENST00000516257 ZNF692Q9BU19 519 aaPredicted RBP10.47□□□□□ -0.73
RNU2-53P-201ENST00000516257 C19orf67A6NJJ6 358 aa10.41□□□□□ -0.74
RNU2-53P-201ENST00000516257 CHADLQ6NUI6 762 aa10.39□□□□□ -0.75
RNU2-53P-201ENST00000516257 PABPN1Q86U42 306 aaKnown RBP eCLIP10.34□□□□□ -0.75
RNU2-53P-201ENST00000516257 GABBR2O75899 941 aa10.32□□□□□ -0.76
RNU2-53P-201ENST00000516257 PRR29P0C7W0 189 aa10.3□□□□□ -0.76
RNU2-53P-201ENST00000516257 LHX8Q68G74 356 aa10.18□□□□□ -0.78
RNU2-53P-201ENST00000516257 CD44P16070 742 aaKnown RBP10.17□□□□□ -0.78
RNU2-53P-201ENST00000516257 FARP1Q9Y4F1 1045 aaPredicted RBP10.16□□□□□ -0.78
RNU2-53P-201ENST00000516257 CSRNP3Q8WYN3 585 aa10.15□□□□□ -0.78
RNU2-53P-201ENST00000516257 POTEIP0CG38 1075 aa10.14□□□□□ -0.79
RNU2-53P-201ENST00000516257 CREBZFQ9NS37 354 aa10.03□□□□□ -0.8
RNU2-53P-201ENST00000516257 ZNF579Q8NAF0 562 aaKnown RBP10□□□□□ -0.81
RNU2-53P-201ENST00000516257 ZRANB1Q9UGI0 708 aa9.99□□□□□ -0.81
RNU2-53P-201ENST00000516257 CLCN6P51797 869 aa9.98□□□□□ -0.81
RNU2-53P-201ENST00000516257 DCBLD2Q96PD2 775 aa9.97□□□□□ -0.81
RNU2-53P-201ENST00000516257 STAG3Q9UJ98 1225 aa9.94□□□□□ -0.82
RNU2-53P-201ENST00000516257 SPDYE4A6NLX3 237 aa9.92□□□□□ -0.82
RNU2-53P-201ENST00000516257 GALR2O43603 387 aaPredicted RBP9.92□□□□□ -0.82
RNU2-53P-201ENST00000516257 EHMT2Q96KQ7 1210 aa9.91□□□□□ -0.82
RNU2-53P-201ENST00000516257 PHF12Q96QT6 1004 aa9.87□□□□□ -0.83
RNU2-53P-201ENST00000516257 MNX1P50219 401 aaPredicted RBP9.82□□□□□ -0.84
RNU2-53P-201ENST00000516257 POTEB2H3BUK9 544 aa9.81□□□□□ -0.84
RNU2-53P-201ENST00000516257 PAK3O75914 559 aaPredicted RBP9.81□□□□□ -0.84
RNU2-53P-201ENST00000516257 OTUD5Q96G74 571 aa9.79□□□□□ -0.84
RNU2-53P-201ENST00000516257 NPM1P06748 294 aaKnown RBP eCLIP9.77□□□□□ -0.85
RNU2-53P-201ENST00000516257 PELP1Q8IZL8 1130 aaKnown RBP9.76□□□□□ -0.85
RNU2-53P-201ENST00000516257 PLSCR2Q9NRY7 297 aa9.74□□□□□ -0.85
RNU2-53P-201ENST00000516257 MS4A3Q96HJ5 214 aa9.73□□□□□ -0.85
RNU2-53P-201ENST00000516257 ASTLQ6HA08 431 aaPredicted RBP9.67□□□□□ -0.86
RNU2-53P-201ENST00000516257 ATMINO43313 823 aaPredicted RBP9.65□□□□□ -0.86
RNU2-53P-201ENST00000516257 PROM2Q8N271 834 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms