RNA–Protein interactions for RNA: ENST00000560296.1

AL355073.1-201, humanhuman

TSL 4 BASIC

Gene AL355073.1, Length 517 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355073.1-201ENST00000560296 AEBP2Q6ZN18 517 aaPredicted RBP19.65■□□□□ 0.74
AL355073.1-201ENST00000560296 CHIC1Q5VXU3 224 aa18.65■□□□□ 0.58
AL355073.1-201ENST00000560296 SENP3Q9H4L4 574 aaPredicted RBP16.77■□□□□ 0.28
AL355073.1-201ENST00000560296 PHF23Q9BUL5 403 aaPredicted RBP16.58■□□□□ 0.24
AL355073.1-201ENST00000560296 FOXD1Q16676 465 aa15.63■□□□□ 0.09
AL355073.1-201ENST00000560296 PLPPR3Q6T4P5 718 aa14.92□□□□□ -0.02
AL355073.1-201ENST00000560296 PIAS4Q8N2W9 510 aaPredicted RBP14.64□□□□□ -0.07
AL355073.1-201ENST00000560296 MSH5O43196 834 aa14.63□□□□□ -0.07
AL355073.1-201ENST00000560296 PPP6R1Q9UPN7 881 aa14.63□□□□□ -0.07
AL355073.1-201ENST00000560296 ADRA2BP18089 450 aa14.61□□□□□ -0.07
AL355073.1-201ENST00000560296 POTEDQ86YR6 584 aa14.29□□□□□ -0.12
AL355073.1-201ENST00000560296 MAPK8IP2Q13387 824 aaPredicted RBP13.44□□□□□ -0.26
AL355073.1-201ENST00000560296 SCAF1Q9H7N4 1312 aaKnown RBP13.37□□□□□ -0.27
AL355073.1-201ENST00000560296 DMRT2Q9Y5R5 561 aa13.28□□□□□ -0.28
AL355073.1-201ENST00000560296 PPP4R3CPQ6ZMV5 832 aa13.1□□□□□ -0.31
AL355073.1-201ENST00000560296 DCAF8L1A6NGE4 600 aa12.87□□□□□ -0.35
AL355073.1-201ENST00000560296 CNKSR2Q8WXI2 1034 aa12.83□□□□□ -0.36
AL355073.1-201ENST00000560296 HOXD11P31277 338 aaPredicted RBP12.78□□□□□ -0.36
AL355073.1-201ENST00000560296 RNF216Q9NWF9 866 aaPredicted RBP12.7□□□□□ -0.38
AL355073.1-201ENST00000560296 CACNB1Q02641 598 aaPredicted RBP12.62□□□□□ -0.39
AL355073.1-201ENST00000560296 NCBP3Q53F19 620 aaKnown RBP12.6□□□□□ -0.39
AL355073.1-201ENST00000560296 RNF39Q9H2S5 420 aa12.47□□□□□ -0.41
AL355073.1-201ENST00000560296 NPM3O75607 178 aaKnown RBP12.39□□□□□ -0.43
AL355073.1-201ENST00000560296 C1QBPQ07021 282 aaKnown RBP12.29□□□□□ -0.44
AL355073.1-201ENST00000560296 DNAJC5BQ9UF47 199 aa12.28□□□□□ -0.44
AL355073.1-201ENST00000560296 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.27□□□□□ -0.45
AL355073.1-201ENST00000560296 KCNA4P22459 653 aa12.17□□□□□ -0.46
AL355073.1-201ENST00000560296 U3KPZ7 1027 aaPredicted RBP11.95□□□□□ -0.5
AL355073.1-201ENST00000560296 CAPN15O75808 1086 aa11.82□□□□□ -0.52
AL355073.1-201ENST00000560296 SLC4A2P04920 1241 aa11.82□□□□□ -0.52
AL355073.1-201ENST00000560296 SPINK5Q9NQ38 1064 aaPredicted RBP11.81□□□□□ -0.52
AL355073.1-201ENST00000560296 DSG3P32926 999 aa11.69□□□□□ -0.54
AL355073.1-201ENST00000560296 TRHP20396 242 aaPredicted RBP11.65□□□□□ -0.54
AL355073.1-201ENST00000560296 APLP2Q06481 763 aa11.63□□□□□ -0.55
AL355073.1-201ENST00000560296 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.62□□□□□ -0.55
AL355073.1-201ENST00000560296 HNRNPUL2Q1KMD3 747 aaKnown RBP11.62□□□□□ -0.55
AL355073.1-201ENST00000560296 ZNF219Q9P2Y4 722 aaPredicted RBP11.56□□□□□ -0.56
AL355073.1-201ENST00000560296 ABCB7O75027 752 aa11.55□□□□□ -0.56
AL355073.1-201ENST00000560296 SAMD1Q6SPF0 538 aaPredicted RBP11.55□□□□□ -0.56
AL355073.1-201ENST00000560296 SLC4A1APQ9BWU0 796 aaKnown RBP11.51□□□□□ -0.57
AL355073.1-201ENST00000560296 MYCNP04198 464 aaPredicted RBP11.46□□□□□ -0.57
AL355073.1-201ENST00000560296 FOXD4L1Q9NU39 408 aa11.34□□□□□ -0.59
AL355073.1-201ENST00000560296 POLA2Q14181 598 aa11.31□□□□□ -0.6
AL355073.1-201ENST00000560296 ATF5Q9Y2D1 282 aaPredicted RBP11.22□□□□□ -0.61
AL355073.1-201ENST00000560296 POTEHQ6S545 545 aa11.21□□□□□ -0.61
AL355073.1-201ENST00000560296 ZBTB22O15209 634 aa11.17□□□□□ -0.62
AL355073.1-201ENST00000560296 RBM42Q9BTD8 480 aaKnown RBP11.16□□□□□ -0.62
AL355073.1-201ENST00000560296 ZBTB12Q9Y330 459 aaPredicted RBP11.03□□□□□ -0.64
AL355073.1-201ENST00000560296 ATXN8OSP0DMR3 200 aa10.97□□□□□ -0.65
AL355073.1-201ENST00000560296 CHRDL2Q6WN34 429 aa10.93□□□□□ -0.66
AL355073.1-201ENST00000560296 OSCARQ8IYS5 282 aa10.93□□□□□ -0.66
AL355073.1-201ENST00000560296 EHMT2Q96KQ7 1210 aa10.93□□□□□ -0.66
AL355073.1-201ENST00000560296 AKT1S1Q96B36 256 aa10.9□□□□□ -0.66
AL355073.1-201ENST00000560296 REM2Q8IYK8 340 aaPredicted RBP10.82□□□□□ -0.68
AL355073.1-201ENST00000560296 FBLN2P98095 1184 aa10.8□□□□□ -0.68
AL355073.1-201ENST00000560296 CSRNP3Q8WYN3 585 aa10.77□□□□□ -0.69
AL355073.1-201ENST00000560296 SPDYE2BA6NHP3 402 aa10.69□□□□□ -0.7
AL355073.1-201ENST00000560296 PITPNM1O00562 1244 aa10.69□□□□□ -0.7
AL355073.1-201ENST00000560296 SPDYE6P0CI01 402 aa10.69□□□□□ -0.7
AL355073.1-201ENST00000560296 SPDYE2Q495Y8 402 aa10.69□□□□□ -0.7
AL355073.1-201ENST00000560296 MKRN4PQ13434 485 aaPredicted RBP10.67□□□□□ -0.7
AL355073.1-201ENST00000560296 PIP4P2Q8N4L2 257 aa10.66□□□□□ -0.7
AL355073.1-201ENST00000560296 ZNF692Q9BU19 519 aaPredicted RBP10.62□□□□□ -0.71
AL355073.1-201ENST00000560296 FXR2P51116 673 aaKnown RBP eCLIP10.58□□□□□ -0.72
AL355073.1-201ENST00000560296 CLEC11AQ9Y240 323 aa10.58□□□□□ -0.72
AL355073.1-201ENST00000560296 HAX1O00165 279 aa10.53□□□□□ -0.72
AL355073.1-201ENST00000560296 SPDYE1Q8NFV5 336 aaPredicted RBP10.52□□□□□ -0.73
AL355073.1-201ENST00000560296 SSUH2Q9Y2M2 353 aa10.52□□□□□ -0.73
AL355073.1-201ENST00000560296 SP7Q8TDD2 431 aaPredicted RBP10.5□□□□□ -0.73
AL355073.1-201ENST00000560296 PRKAR2AP13861 404 aaKnown RBP10.45□□□□□ -0.74
AL355073.1-201ENST00000560296 PABPN1Q86U42 306 aaKnown RBP eCLIP10.45□□□□□ -0.74
AL355073.1-201ENST00000560296 PRR29P0C7W0 189 aa10.37□□□□□ -0.75
AL355073.1-201ENST00000560296 EVX2Q03828 476 aa10.36□□□□□ -0.75
AL355073.1-201ENST00000560296 CHADLQ6NUI6 762 aa10.35□□□□□ -0.75
AL355073.1-201ENST00000560296 C19orf67A6NJJ6 358 aa10.24□□□□□ -0.77
AL355073.1-201ENST00000560296 NISCHQ9Y2I1 1504 aa10.23□□□□□ -0.77
AL355073.1-201ENST00000560296 SPDYE4A6NLX3 237 aa10.21□□□□□ -0.77
AL355073.1-201ENST00000560296 FARP1Q9Y4F1 1045 aaPredicted RBP10.16□□□□□ -0.78
AL355073.1-201ENST00000560296 STAG3Q9UJ98 1225 aa10.14□□□□□ -0.79
AL355073.1-201ENST00000560296 GABBR2O75899 941 aa10.13□□□□□ -0.79
AL355073.1-201ENST00000560296 CD44P16070 742 aaKnown RBP10.11□□□□□ -0.79
AL355073.1-201ENST00000560296 CREBZFQ9NS37 354 aa10.07□□□□□ -0.8
AL355073.1-201ENST00000560296 ZRANB1Q9UGI0 708 aa9.98□□□□□ -0.81
AL355073.1-201ENST00000560296 NPM1P06748 294 aaKnown RBP eCLIP9.92□□□□□ -0.82
AL355073.1-201ENST00000560296 CLCN6P51797 869 aa9.92□□□□□ -0.82
AL355073.1-201ENST00000560296 PAK3O75914 559 aaPredicted RBP9.9□□□□□ -0.82
AL355073.1-201ENST00000560296 PROM2Q8N271 834 aa9.9□□□□□ -0.82
AL355073.1-201ENST00000560296 ZNF579Q8NAF0 562 aaKnown RBP9.9□□□□□ -0.82
AL355073.1-201ENST00000560296 DCBLD2Q96PD2 775 aa9.89□□□□□ -0.83
AL355073.1-201ENST00000560296 POTEIP0CG38 1075 aa9.88□□□□□ -0.83
AL355073.1-201ENST00000560296 LHX8Q68G74 356 aa9.88□□□□□ -0.83
AL355073.1-201ENST00000560296 MNX1P50219 401 aaPredicted RBP9.85□□□□□ -0.83
AL355073.1-201ENST00000560296 PHF12Q96QT6 1004 aa9.84□□□□□ -0.83
AL355073.1-201ENST00000560296 GALR2O43603 387 aaPredicted RBP9.82□□□□□ -0.84
AL355073.1-201ENST00000560296 MIER1Q8N108 512 aa9.79□□□□□ -0.84
AL355073.1-201ENST00000560296 PLEKHG5O94827 1062 aa9.77□□□□□ -0.85
AL355073.1-201ENST00000560296 TSPYL2Q9H2G4 693 aaPredicted RBP9.77□□□□□ -0.85
AL355073.1-201ENST00000560296 FKBP8Q14318 412 aa9.72□□□□□ -0.85
AL355073.1-201ENST00000560296 PLCD3Q8N3E9 789 aa9.71□□□□□ -0.86
AL355073.1-201ENST00000560296 MS4A3Q96HJ5 214 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms