RNA–Protein interactions for RNA: ENST00000475267.1

H3F3AP5-201, Transcript of H3 histone, family 3A, pseudogene 5, humanhuman

BASIC

Gene H3F3AP5, Length 429 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP5-201ENST00000475267 AEBP2Q6ZN18 517 aaPredicted RBP19.41■□□□□ 0.7
H3F3AP5-201ENST00000475267 CHIC1Q5VXU3 224 aa19.16■□□□□ 0.66
H3F3AP5-201ENST00000475267 PHF23Q9BUL5 403 aaPredicted RBP16.94■□□□□ 0.3
H3F3AP5-201ENST00000475267 SENP3Q9H4L4 574 aaPredicted RBP16.29■□□□□ 0.2
H3F3AP5-201ENST00000475267 NISCHQ9Y2I1 1504 aa16.09■□□□□ 0.17
H3F3AP5-201ENST00000475267 PLPPR3Q6T4P5 718 aa15.61■□□□□ 0.09
H3F3AP5-201ENST00000475267 FOXD1Q16676 465 aa15.17■□□□□ 0.02
H3F3AP5-201ENST00000475267 PPP6R1Q9UPN7 881 aa14.85□□□□□ -0.03
H3F3AP5-201ENST00000475267 ADRA2BP18089 450 aa14.83□□□□□ -0.04
H3F3AP5-201ENST00000475267 CCDC180Q9P1Z9 1646 aa14.41□□□□□ -0.1
H3F3AP5-201ENST00000475267 ABCC9O60706 1549 aa14.39□□□□□ -0.11
H3F3AP5-201ENST00000475267 PIAS4Q8N2W9 510 aaPredicted RBP14.32□□□□□ -0.12
H3F3AP5-201ENST00000475267 KCNA4P22459 653 aa14.08□□□□□ -0.16
H3F3AP5-201ENST00000475267 EHMT2Q96KQ7 1210 aa13.88□□□□□ -0.19
H3F3AP5-201ENST00000475267 PPP4R3CPQ6ZMV5 832 aa13.84□□□□□ -0.19
H3F3AP5-201ENST00000475267 MSH5O43196 834 aa13.78□□□□□ -0.2
H3F3AP5-201ENST00000475267 RB1CC1Q8TDY2 1594 aa13.7□□□□□ -0.22
H3F3AP5-201ENST00000475267 NACADO15069 1562 aa13.61□□□□□ -0.23
H3F3AP5-201ENST00000475267 NCBP3Q53F19 620 aaKnown RBP13.6□□□□□ -0.23
H3F3AP5-201ENST00000475267 SLC4A1APQ9BWU0 796 aaKnown RBP13.57□□□□□ -0.24
H3F3AP5-201ENST00000475267 DCAF8L2P0C7V8 631 aa13.52□□□□□ -0.25
H3F3AP5-201ENST00000475267 MYO15BQ96JP2 1530 aa13.44□□□□□ -0.26
H3F3AP5-201ENST00000475267 SCAF1Q9H7N4 1312 aaKnown RBP13.42□□□□□ -0.26
H3F3AP5-201ENST00000475267 DNAJC5BQ9UF47 199 aa13.41□□□□□ -0.26
H3F3AP5-201ENST00000475267 MAPK8IP2Q13387 824 aaPredicted RBP13.39□□□□□ -0.27
H3F3AP5-201ENST00000475267 CSRNP3Q8WYN3 585 aa13.39□□□□□ -0.27
H3F3AP5-201ENST00000475267 NPM3O75607 178 aaKnown RBP13.38□□□□□ -0.27
H3F3AP5-201ENST00000475267 PABPN1Q86U42 306 aaKnown RBP eCLIP13.38□□□□□ -0.27
H3F3AP5-201ENST00000475267 ZCCHC6Q5VYS8 1495 aaKnown RBP13.37□□□□□ -0.27
H3F3AP5-201ENST00000475267 CNKSR2Q8WXI2 1034 aa13.36□□□□□ -0.27
H3F3AP5-201ENST00000475267 UNC13AQ9UPW8 1703 aa13.34□□□□□ -0.27
H3F3AP5-201ENST00000475267 BICRAQ9NZM4 1560 aa13.3□□□□□ -0.28
H3F3AP5-201ENST00000475267 DCAF1Q9Y4B6 1507 aa13.29□□□□□ -0.28
H3F3AP5-201ENST00000475267 SCRIBQ14160 1630 aa13.17□□□□□ -0.3
H3F3AP5-201ENST00000475267 SHROOM4Q9ULL8 1493 aa13.15□□□□□ -0.3
H3F3AP5-201ENST00000475267 DMRT2Q9Y5R5 561 aa13.09□□□□□ -0.31
H3F3AP5-201ENST00000475267 RNF216Q9NWF9 866 aaPredicted RBP13.03□□□□□ -0.32
H3F3AP5-201ENST00000475267 CC2D2AQ9P2K1 1620 aa12.99□□□□□ -0.33
H3F3AP5-201ENST00000475267 EIF4G1Q04637 1599 aaKnown RBP12.98□□□□□ -0.33
H3F3AP5-201ENST00000475267 CECR2Q9BXF3 1484 aa12.95□□□□□ -0.34
H3F3AP5-201ENST00000475267 ZBTB22O15209 634 aa12.94□□□□□ -0.34
H3F3AP5-201ENST00000475267 HOXD11P31277 338 aaPredicted RBP12.94□□□□□ -0.34
H3F3AP5-201ENST00000475267 FOXD4L1Q9NU39 408 aa12.84□□□□□ -0.35
H3F3AP5-201ENST00000475267 SLC4A2P04920 1241 aa12.61□□□□□ -0.39
H3F3AP5-201ENST00000475267 NCAPD3P42695 1498 aa12.56□□□□□ -0.4
H3F3AP5-201ENST00000475267 SMARCA4P51532 1647 aa12.55□□□□□ -0.4
H3F3AP5-201ENST00000475267 ATAD2BQ9ULI0 1458 aa12.54□□□□□ -0.4
H3F3AP5-201ENST00000475267 SMARCA2P51531 1590 aa12.51□□□□□ -0.41
H3F3AP5-201ENST00000475267 HMGXB3Q12766 1538 aa12.5□□□□□ -0.41
H3F3AP5-201ENST00000475267 BAZ1AQ9NRL2 1556 aaPredicted RBP12.49□□□□□ -0.41
H3F3AP5-201ENST00000475267 DCAF8L1A6NGE4 600 aa12.45□□□□□ -0.42
H3F3AP5-201ENST00000475267 DNAJC5Q9H3Z4 198 aa12.45□□□□□ -0.42
H3F3AP5-201ENST00000475267 BAZ1BQ9UIG0 1483 aaKnown RBP12.44□□□□□ -0.42
H3F3AP5-201ENST00000475267 ERCC6Q03468 1493 aa12.42□□□□□ -0.42
H3F3AP5-201ENST00000475267 PEG3Q9GZU2 1588 aa12.42□□□□□ -0.42
H3F3AP5-201ENST00000475267 MROH2BQ7Z745 1585 aa12.4□□□□□ -0.42
H3F3AP5-201ENST00000475267 CUX2O14529 1486 aa12.38□□□□□ -0.43
H3F3AP5-201ENST00000475267 NESP48681 1621 aa12.37□□□□□ -0.43
H3F3AP5-201ENST00000475267 MYCNP04198 464 aaPredicted RBP12.36□□□□□ -0.43
H3F3AP5-201ENST00000475267 ATXN8OSP0DMR3 200 aa12.34□□□□□ -0.43
H3F3AP5-201ENST00000475267 LAMC3Q9Y6N6 1575 aa12.28□□□□□ -0.44
H3F3AP5-201ENST00000475267 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.26□□□□□ -0.45
H3F3AP5-201ENST00000475267 THOC2Q8NI27 1593 aaKnown RBP12.25□□□□□ -0.45
H3F3AP5-201ENST00000475267 WIZO95785 1651 aa12.23□□□□□ -0.45
H3F3AP5-201ENST00000475267 PDS5BQ9NTI5 1447 aa12.2□□□□□ -0.46
H3F3AP5-201ENST00000475267 U3KPZ7 1027 aaPredicted RBP12.19□□□□□ -0.46
H3F3AP5-201ENST00000475267 KIF21AQ7Z4S6 1674 aa12.19□□□□□ -0.46
H3F3AP5-201ENST00000475267 CADPSQ9ULU8 1353 aa12.18□□□□□ -0.46
H3F3AP5-201ENST00000475267 AMER1Q5JTC6 1135 aaPredicted RBP12.18□□□□□ -0.46
H3F3AP5-201ENST00000475267 RSF1Q96T23 1441 aaPredicted RBP12.16□□□□□ -0.46
H3F3AP5-201ENST00000475267 POTEDQ86YR6 584 aa12.14□□□□□ -0.47
H3F3AP5-201ENST00000475267 MRC2Q9UBG0 1479 aa12.12□□□□□ -0.47
H3F3AP5-201ENST00000475267 TOP2AP11388 1531 aaKnown RBP12.11□□□□□ -0.47
H3F3AP5-201ENST00000475267 FKBP8Q14318 412 aa12.11□□□□□ -0.47
H3F3AP5-201ENST00000475267 WDR62O43379 1518 aa12.1□□□□□ -0.47
H3F3AP5-201ENST00000475267 RTN4Q9NQC3 1192 aaKnown RBP12.09□□□□□ -0.47
H3F3AP5-201ENST00000475267 CEP164Q9UPV0 1460 aa12.08□□□□□ -0.48
H3F3AP5-201ENST00000475267 CFTRP13569 1480 aa12.07□□□□□ -0.48
H3F3AP5-201ENST00000475267 FANCD2Q9BXW9 1451 aa12.07□□□□□ -0.48
H3F3AP5-201ENST00000475267 ATF5Q9Y2D1 282 aaPredicted RBP12.06□□□□□ -0.48
H3F3AP5-201ENST00000475267 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12□□□□□ -0.49
H3F3AP5-201ENST00000475267 SLC24A1O60721 1099 aa12□□□□□ -0.49
H3F3AP5-201ENST00000475267 HNRNPUL2Q1KMD3 747 aaKnown RBP12□□□□□ -0.49
H3F3AP5-201ENST00000475267 SAMD1Q6SPF0 538 aaPredicted RBP11.99□□□□□ -0.49
H3F3AP5-201ENST00000475267 URB2Q14146 1524 aaKnown RBP11.96□□□□□ -0.49
H3F3AP5-201ENST00000475267 CCDC88BA6NC98 1476 aa11.95□□□□□ -0.5
H3F3AP5-201ENST00000475267 PRDM2Q13029 1718 aa11.91□□□□□ -0.5
H3F3AP5-201ENST00000475267 RNF39Q9H2S5 420 aa11.9□□□□□ -0.5
H3F3AP5-201ENST00000475267 TOPBP1Q92547 1522 aa11.84□□□□□ -0.51
H3F3AP5-201ENST00000475267 IFT140Q96RY7 1462 aa11.83□□□□□ -0.52
H3F3AP5-201ENST00000475267 ZNF608Q9ULD9 1512 aaPredicted RBP11.81□□□□□ -0.52
H3F3AP5-201ENST00000475267 DNMBPQ6XZF7 1577 aa11.8□□□□□ -0.52
H3F3AP5-201ENST00000475267 TRIM41Q8WV44 630 aa11.78□□□□□ -0.52
H3F3AP5-201ENST00000475267 ABCC8Q09428 1581 aa11.78□□□□□ -0.52
H3F3AP5-201ENST00000475267 OSCARQ8IYS5 282 aa11.77□□□□□ -0.53
H3F3AP5-201ENST00000475267 SPINK5Q9NQ38 1064 aaPredicted RBP11.77□□□□□ -0.53
H3F3AP5-201ENST00000475267 EIF4G3O43432 1585 aaKnown RBP11.76□□□□□ -0.53
H3F3AP5-201ENST00000475267 APLP2Q06481 763 aa11.76□□□□□ -0.53
H3F3AP5-201ENST00000475267 ZNF219Q9P2Y4 722 aaPredicted RBP11.76□□□□□ -0.53
H3F3AP5-201ENST00000475267 POLA1P09884 1462 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms