Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.89□□□□□ -1.47
CAPN3P20807 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CAPN3P20807 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CAPN3P20807 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
CAPN3P20807 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CAPN3P20807 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CAPN3P20807 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.89□□□□□ -1.47
CAPN3P20807 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CAPN3P20807 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CAPN3P20807 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CAPN3P20807 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CAPN3P20807 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CAPN3P20807 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CAPN3P20807 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CAPN3P20807 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CAPN3P20807 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CAPN3P20807 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.88□□□□□ -1.47
CAPN3P20807 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
CAPN3P20807 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CAPN3P20807 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.88□□□□□ -1.47
CAPN3P20807 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CAPN3P20807 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CAPN3P20807 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.88□□□□□ -1.47
CAPN3P20807 RNU6-666P-201ENST00000363499 107 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 RNU6-225P-201ENST00000384613 103 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 CHMP1B2P-201ENST00000399581 597 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 YWHAZP6-201ENST00000399764 738 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.88□□□□□ -1.47
CAPN3P20807 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.88□□□□□ -1.47
CAPN3P20807 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.88□□□□□ -1.47
CAPN3P20807 BRWD1P3-201ENST00000428816 390 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 AC108479.1-201ENST00000431142 427 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.88□□□□□ -1.47
CAPN3P20807 MTND2P2-201ENST00000434633 945 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.88□□□□□ -1.47
CAPN3P20807 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.88□□□□□ -1.47
CAPN3P20807 GAPDHP23-201ENST00000444823 993 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.88□□□□□ -1.47
CAPN3P20807 HMGB1P7-201ENST00000450921 612 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.88□□□□□ -1.47
CAPN3P20807 AC009963.3-201ENST00000458090 486 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 AC092691.2-201ENST00000461787 803 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 CABYRP1-201ENST00000465493 1045 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.88□□□□□ -1.47
CAPN3P20807 RN7SL643P-201ENST00000471845 291 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.88□□□□□ -1.47
CAPN3P20807 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CAPN3P20807 AC093664.1-201ENST00000511779 289 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 RNA5SP418-201ENST00000515951 117 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.88□□□□□ -1.47
CAPN3P20807 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.88□□□□□ -1.47
CAPN3P20807 OR8K2P-201ENST00000524645 927 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 HMGB1P42-201ENST00000532126 553 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 AP001858.2-201ENST00000536213 601 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.88□□□□□ -1.47
CAPN3P20807 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.88□□□□□ -1.47
CAPN3P20807 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.88□□□□□ -1.47
CAPN3P20807 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.88□□□□□ -1.47
CAPN3P20807 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CAPN3P20807 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.88□□□□□ -1.47
CAPN3P20807 AC027176.2-201ENST00000559166 746 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.88□□□□□ -1.47
CAPN3P20807 AC005520.3-201ENST00000602874 370 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 AC008555.7-201ENST00000605008 583 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 AL591167.1-201ENST00000607321 456 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 AC109309.2-201ENST00000612597 332 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 AL096712.1-201ENST00000614561 159 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 AL122023.1-201ENST00000622847 530 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.88□□□□□ -1.47
CAPN3P20807 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.88□□□□□ -1.47
CAPN3P20807 AC006453.5-201ENST00000636451 619 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CAPN3P20807 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CAPN3P20807 AC104966.1-201ENST00000467010 1464 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CAPN3P20807 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CAPN3P20807 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
CAPN3P20807 AC079298.1-201ENST00000625026 1619 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 AC232271.1-201ENST00000602455 2715 ntBASIC5.88□□□□□ -1.47
CAPN3P20807 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.88□□□□□ -1.47
CAPN3P20807 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CAPN3P20807 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CAPN3P20807 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CAPN3P20807 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.87□□□□□ -1.47
CAPN3P20807 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
CAPN3P20807 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CAPN3P20807 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
CAPN3P20807 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.87□□□□□ -1.47
CAPN3P20807 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.87□□□□□ -1.47
CAPN3P20807 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.87□□□□□ -1.47
CAPN3P20807 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CAPN3P20807 AC087516.1-201ENST00000561236 2428 ntBASIC5.87□□□□□ -1.47
CAPN3P20807 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.87□□□□□ -1.47
CAPN3P20807 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CAPN3P20807 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CAPN3P20807 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CAPN3P20807 PARP4P2-201ENST00000446672 3326 ntBASIC5.87□□□□□ -1.47
CAPN3P20807 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms