RNA–Protein interactions for RNA: ENST00000381886.8

USP7-202, Transcript of ubiquitin specific peptidase 7, humanhuman

TSL 1 (best) BASIC

Gene USP7, Length 3,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP7-202ENST00000381886 NISCHQ9Y2I1 1504 aa11.37□□□□□ -0.59
USP7-202ENST00000381886 CHIC1Q5VXU3 224 aa11.33□□□□□ -0.6
USP7-202ENST00000381886 DCAF8L2P0C7V8 631 aa11.1□□□□□ -0.63
USP7-202ENST00000381886 SLC24A1O60721 1099 aa10.85□□□□□ -0.67
USP7-202ENST00000381886 AEBP2Q6ZN18 517 aaPredicted RBP10.8□□□□□ -0.68
USP7-202ENST00000381886 EHMT2Q96KQ7 1210 aa10.79□□□□□ -0.68
USP7-202ENST00000381886 ABCC9O60706 1549 aa10.78□□□□□ -0.68
USP7-202ENST00000381886 PABPN1Q86U42 306 aaKnown RBP eCLIP10.38□□□□□ -0.752e-6■■□□□ 12.3
USP7-202ENST00000381886 PHF23Q9BUL5 403 aaPredicted RBP10.25□□□□□ -0.77
USP7-202ENST00000381886 PLPPR3Q6T4P5 718 aa10.2□□□□□ -0.78
USP7-202ENST00000381886 DNAJC5BQ9UF47 199 aa10.09□□□□□ -0.79
USP7-202ENST00000381886 RTN4Q9NQC3 1192 aaKnown RBP10.01□□□□□ -0.81
USP7-202ENST00000381886 SHROOM4Q9ULL8 1493 aa9.97□□□□□ -0.81
USP7-202ENST00000381886 CCDC180Q9P1Z9 1646 aa9.85□□□□□ -0.83
USP7-202ENST00000381886 KCNA4P22459 653 aa9.83□□□□□ -0.84
USP7-202ENST00000381886 CSRNP3Q8WYN3 585 aa9.83□□□□□ -0.84
USP7-202ENST00000381886 PRKCSHP14314 528 aaPredicted RBP9.74□□□□□ -0.85
USP7-202ENST00000381886 RB1CC1Q8TDY2 1594 aa9.68□□□□□ -0.86
USP7-202ENST00000381886 AMER1Q5JTC6 1135 aaPredicted RBP9.66□□□□□ -0.86
USP7-202ENST00000381886 SCRIBQ14160 1630 aa9.59□□□□□ -0.87
USP7-202ENST00000381886 DAXXQ9UER7 740 aaPredicted RBP9.56□□□□□ -0.88
USP7-202ENST00000381886 NCBP3Q53F19 620 aaKnown RBP9.55□□□□□ -0.88
USP7-202ENST00000381886 TRIM41Q8WV44 630 aa9.52□□□□□ -0.89
USP7-202ENST00000381886 CECR2Q9BXF3 1484 aa9.52□□□□□ -0.89
USP7-202ENST00000381886 NACADO15069 1562 aa9.48□□□□□ -0.89
USP7-202ENST00000381886 SUPT5HO00267 1087 aaKnown RBP9.44□□□□□ -0.9
USP7-202ENST00000381886 SLC4A1APQ9BWU0 796 aaKnown RBP9.42□□□□□ -0.9
USP7-202ENST00000381886 ZCCHC6Q5VYS8 1495 aaKnown RBP9.4□□□□□ -0.91
USP7-202ENST00000381886 ERCC6Q03468 1493 aa9.39□□□□□ -0.91
USP7-202ENST00000381886 FBLN2P98095 1184 aa9.37□□□□□ -0.91
USP7-202ENST00000381886 TULP1O00294 542 aaPredicted RBP9.32□□□□□ -0.92
USP7-202ENST00000381886 ADRA2BP18089 450 aa9.3□□□□□ -0.92
USP7-202ENST00000381886 TTBK1Q5TCY1 1321 aaPredicted RBP9.29□□□□□ -0.92
USP7-202ENST00000381886 TIMELESSQ9UNS1 1208 aa9.28□□□□□ -0.92
USP7-202ENST00000381886 CC2D2AQ9P2K1 1620 aa9.27□□□□□ -0.93
USP7-202ENST00000381886 MYO15BQ96JP2 1530 aa9.25□□□□□ -0.93
USP7-202ENST00000381886 DCAF1Q9Y4B6 1507 aa9.22□□□□□ -0.93
USP7-202ENST00000381886 TRHP20396 242 aaPredicted RBP9.22□□□□□ -0.93
USP7-202ENST00000381886 TPRNQ4KMQ1 711 aa9.22□□□□□ -0.93
USP7-202ENST00000381886 EIF4G1Q04637 1599 aaKnown RBP9.21□□□□□ -0.94
USP7-202ENST00000381886 BICRAQ9NZM4 1560 aa9.21□□□□□ -0.94
USP7-202ENST00000381886 RANGAP1P46060 587 aaPredicted RBP9.2□□□□□ -0.94
USP7-202ENST00000381886 DNAJC5Q9H3Z4 198 aa9.18□□□□□ -0.94
USP7-202ENST00000381886 TAOK2Q9UL54 1235 aa9.14□□□□□ -0.95
USP7-202ENST00000381886 HAP1P54257 671 aaPredicted RBP9.13□□□□□ -0.95
USP7-202ENST00000381886 NESP48681 1621 aa9.12□□□□□ -0.95
USP7-202ENST00000381886 ZBTB22O15209 634 aa9.11□□□□□ -0.95
USP7-202ENST00000381886 UNC13AQ9UPW8 1703 aa9.1□□□□□ -0.95
USP7-202ENST00000381886 CYB5RLQ6IPT4 315 aa9.08□□□□□ -0.96
USP7-202ENST00000381886 ERICH6Q7L0X2 663 aa9.08□□□□□ -0.96
USP7-202ENST00000381886 SMARCA2P51531 1590 aa9.07□□□□□ -0.96
USP7-202ENST00000381886 BAZ1BQ9UIG0 1483 aaKnown RBP9.07□□□□□ -0.96
USP7-202ENST00000381886 PODXL2Q9NZ53 605 aa9.06□□□□□ -0.96
USP7-202ENST00000381886 PELP1Q8IZL8 1130 aaKnown RBP9.04□□□□□ -0.96
USP7-202ENST00000381886 ARXQ96QS3 562 aa9.02□□□□□ -0.97
USP7-202ENST00000381886 BCANQ96GW7 911 aa9.01□□□□□ -0.97
USP7-202ENST00000381886 OSCARQ8IYS5 282 aa8.98□□□□□ -0.97
USP7-202ENST00000381886 ATAD2BQ9ULI0 1458 aa8.97□□□□□ -0.97
USP7-202ENST00000381886 PLCB2Q00722 1185 aa8.96□□□□□ -0.98
USP7-202ENST00000381886 KLHL34Q8N239 644 aa8.95□□□□□ -0.98
USP7-202ENST00000381886 HOMEZQ8IX15 550 aa8.95□□□□□ -0.98
USP7-202ENST00000381886 CHMP7Q8WUX9 453 aaPredicted RBP8.94□□□□□ -0.98
USP7-202ENST00000381886 PDS5BQ9NTI5 1447 aa8.93□□□□□ -0.98
USP7-202ENST00000381886 MYT1Q01538 1121 aa8.92□□□□□ -0.98
USP7-202ENST00000381886 FAM9AQ8IZU1 332 aaPredicted RBP8.92□□□□□ -0.98
USP7-202ENST00000381886 MROH2BQ7Z745 1585 aa8.91□□□□□ -0.98
USP7-202ENST00000381886 ARID3CA6NKF2 412 aa8.89□□□□□ -0.99
USP7-202ENST00000381886 CADPSQ9ULU8 1353 aa8.87□□□□□ -0.99
USP7-202ENST00000381886 FKBP8Q14318 412 aa8.86□□□□□ -0.99
USP7-202ENST00000381886 NCAPD3P42695 1498 aa8.85□□□□□ -0.99
USP7-202ENST00000381886 TDRD9Q8NDG6 1382 aaKnown RBP8.84□□□□□ -0.99
USP7-202ENST00000381886 ATP1B4Q9UN42 357 aaPredicted RBP8.84□□□□□ -0.99
USP7-202ENST00000381886 BAZ1AQ9NRL2 1556 aaPredicted RBP8.84□□□□□ -0.99
USP7-202ENST00000381886 GTF3C3Q9Y5Q9 886 aa8.83□□□□□ -1
USP7-202ENST00000381886 NPM3O75607 178 aaKnown RBP8.82□□□□□ -1
USP7-202ENST00000381886 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.82□□□□□ -1
USP7-202ENST00000381886 HNRNPUL2Q1KMD3 747 aaKnown RBP8.82□□□□□ -1
USP7-202ENST00000381886 APLP2Q06481 763 aa8.81□□□□□ -1
USP7-202ENST00000381886 PPP6R1Q9UPN7 881 aa8.81□□□□□ -1
USP7-202ENST00000381886 EIF5BO60841 1220 aaKnown RBP8.81□□□□□ -1
USP7-202ENST00000381886 SMARCA4P51532 1647 aa8.79□□□□□ -1
USP7-202ENST00000381886 CEP164Q9UPV0 1460 aa8.79□□□□□ -1
USP7-202ENST00000381886 C14orf37Q86TY3 774 aa8.79□□□□□ -1
USP7-202ENST00000381886 FANCD2Q9BXW9 1451 aa8.79□□□□□ -1
USP7-202ENST00000381886 RSF1Q96T23 1441 aaPredicted RBP8.78□□□□□ -1
USP7-202ENST00000381886 NPM1P06748 294 aaKnown RBP eCLIP8.76□□□□□ -1.01
USP7-202ENST00000381886 WIZO95785 1651 aa8.76□□□□□ -1.01
USP7-202ENST00000381886 AQRO60306 1485 aaKnown RBP eCLIP8.74□□□□□ -1.016e-7■■■■□ 20.4
USP7-202ENST00000381886 SENP3Q9H4L4 574 aaPredicted RBP8.73□□□□□ -1.01
USP7-202ENST00000381886 CUX2O14529 1486 aa8.73□□□□□ -1.01
USP7-202ENST00000381886 MYT1LQ9UL68 1186 aa8.72□□□□□ -1.01
USP7-202ENST00000381886 NPM2Q86SE8 214 aaKnown RBP8.72□□□□□ -1.01
USP7-202ENST00000381886 P3H3Q8IVL6 736 aa8.71□□□□□ -1.02
USP7-202ENST00000381886 PPP4R3CPQ6ZMV5 832 aa8.7□□□□□ -1.02
USP7-202ENST00000381886 MRC2Q9UBG0 1479 aa8.69□□□□□ -1.02
USP7-202ENST00000381886 KCNH8Q96L42 1107 aa8.66□□□□□ -1.02
USP7-202ENST00000381886 ZNF608Q9ULD9 1512 aaPredicted RBP8.66□□□□□ -1.02
USP7-202ENST00000381886 RAD54L2Q9Y4B4 1467 aa8.65□□□□□ -1.02
USP7-202ENST00000381886 SOGA1O94964 1423 aa8.64□□□□□ -1.03
USP7-202ENST00000381886 CCDC88BA6NC98 1476 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms