RNA–Protein interactions for RNA: ENST00000428816.1

BRWD1P3-201, Transcript of bromodomain and WD repeat domain containing 1 pseudogene 3, humanhuman

BASIC

Gene BRWD1P3, Length 390 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1P3-201ENST00000428816 AEBP2Q6ZN18 517 aaPredicted RBP19.12■□□□□ 0.65
BRWD1P3-201ENST00000428816 CHIC1Q5VXU3 224 aa18.27■□□□□ 0.52
BRWD1P3-201ENST00000428816 SENP3Q9H4L4 574 aaPredicted RBP16.18■□□□□ 0.18
BRWD1P3-201ENST00000428816 PHF23Q9BUL5 403 aaPredicted RBP16.08■□□□□ 0.16
BRWD1P3-201ENST00000428816 FOXD1Q16676 465 aa15.13■□□□□ 0.01
BRWD1P3-201ENST00000428816 NISCHQ9Y2I1 1504 aa14.78□□□□□ -0.04
BRWD1P3-201ENST00000428816 DNAJC5BQ9UF47 199 aa14.65□□□□□ -0.06
BRWD1P3-201ENST00000428816 ABCC9O60706 1549 aa14.65□□□□□ -0.06
BRWD1P3-201ENST00000428816 PLPPR3Q6T4P5 718 aa14.63□□□□□ -0.07
BRWD1P3-201ENST00000428816 PPP6R1Q9UPN7 881 aa14.31□□□□□ -0.12
BRWD1P3-201ENST00000428816 DNAJC5Q9H3Z4 198 aa14.25□□□□□ -0.13
BRWD1P3-201ENST00000428816 ADRA2BP18089 450 aa14.23□□□□□ -0.13
BRWD1P3-201ENST00000428816 PIAS4Q8N2W9 510 aaPredicted RBP14.12□□□□□ -0.15
BRWD1P3-201ENST00000428816 MSH5O43196 834 aa14.02□□□□□ -0.17
BRWD1P3-201ENST00000428816 CCDC180Q9P1Z9 1646 aa13.71□□□□□ -0.22
BRWD1P3-201ENST00000428816 RB1CC1Q8TDY2 1594 aa13.54□□□□□ -0.24
BRWD1P3-201ENST00000428816 PABPN1Q86U42 306 aaKnown RBP eCLIP13.47□□□□□ -0.25
BRWD1P3-201ENST00000428816 POTEDQ86YR6 584 aa13.46□□□□□ -0.25
BRWD1P3-201ENST00000428816 CECR2Q9BXF3 1484 aa13.35□□□□□ -0.27
BRWD1P3-201ENST00000428816 NACADO15069 1562 aa13.23□□□□□ -0.29
BRWD1P3-201ENST00000428816 CC2D2AQ9P2K1 1620 aa13.2□□□□□ -0.3
BRWD1P3-201ENST00000428816 BICRAQ9NZM4 1560 aa13.16□□□□□ -0.3
BRWD1P3-201ENST00000428816 UNC13AQ9UPW8 1703 aa13.13□□□□□ -0.31
BRWD1P3-201ENST00000428816 CUX2O14529 1486 aa13.13□□□□□ -0.31
BRWD1P3-201ENST00000428816 TRIM41Q8WV44 630 aa13.12□□□□□ -0.31
BRWD1P3-201ENST00000428816 MAPK8IP2Q13387 824 aaPredicted RBP13.04□□□□□ -0.32
BRWD1P3-201ENST00000428816 SHROOM4Q9ULL8 1493 aa13□□□□□ -0.33
BRWD1P3-201ENST00000428816 EIF4G1Q04637 1599 aaKnown RBP12.94□□□□□ -0.34
BRWD1P3-201ENST00000428816 SCAF1Q9H7N4 1312 aaKnown RBP12.92□□□□□ -0.34
BRWD1P3-201ENST00000428816 DMRT2Q9Y5R5 561 aa12.89□□□□□ -0.35
BRWD1P3-201ENST00000428816 PPP4R3CPQ6ZMV5 832 aa12.87□□□□□ -0.35
BRWD1P3-201ENST00000428816 DCAF8L2P0C7V8 631 aa12.82□□□□□ -0.36
BRWD1P3-201ENST00000428816 MYO15BQ96JP2 1530 aa12.77□□□□□ -0.37
BRWD1P3-201ENST00000428816 ERCC6Q03468 1493 aa12.74□□□□□ -0.37
BRWD1P3-201ENST00000428816 CNKSR2Q8WXI2 1034 aa12.57□□□□□ -0.4
BRWD1P3-201ENST00000428816 HOXD11P31277 338 aaPredicted RBP12.5□□□□□ -0.41
BRWD1P3-201ENST00000428816 SCRIBQ14160 1630 aa12.43□□□□□ -0.42
BRWD1P3-201ENST00000428816 RNF216Q9NWF9 866 aaPredicted RBP12.42□□□□□ -0.42
BRWD1P3-201ENST00000428816 THOC2Q8NI27 1593 aaKnown RBP12.4□□□□□ -0.42
BRWD1P3-201ENST00000428816 NCBP3Q53F19 620 aaKnown RBP12.35□□□□□ -0.43
BRWD1P3-201ENST00000428816 ILDR1Q86SU0 546 aaPredicted RBP12.33□□□□□ -0.44
BRWD1P3-201ENST00000428816 OSCARQ8IYS5 282 aa12.32□□□□□ -0.44
BRWD1P3-201ENST00000428816 NESP48681 1621 aa12.29□□□□□ -0.44
BRWD1P3-201ENST00000428816 DCAF8L1A6NGE4 600 aa12.27□□□□□ -0.45
BRWD1P3-201ENST00000428816 NPM3O75607 178 aaKnown RBP12.27□□□□□ -0.45
BRWD1P3-201ENST00000428816 BAZ1AQ9NRL2 1556 aaPredicted RBP12.26□□□□□ -0.45
BRWD1P3-201ENST00000428816 TRHP20396 242 aaPredicted RBP12.24□□□□□ -0.45
BRWD1P3-201ENST00000428816 NCAPD3P42695 1498 aa12.24□□□□□ -0.45
BRWD1P3-201ENST00000428816 RIMBP3CA6NJZ7 1639 aa12.23□□□□□ -0.45
BRWD1P3-201ENST00000428816 RIMBP3BA6NNM3 1639 aa12.23□□□□□ -0.45
BRWD1P3-201ENST00000428816 RIMBP3Q9UFD9 1639 aa12.23□□□□□ -0.45
BRWD1P3-201ENST00000428816 DCAF1Q9Y4B6 1507 aa12.21□□□□□ -0.46
BRWD1P3-201ENST00000428816 KCNA4P22459 653 aa12.18□□□□□ -0.46
BRWD1P3-201ENST00000428816 SMARCA2P51531 1590 aa12.18□□□□□ -0.46
BRWD1P3-201ENST00000428816 ARHGEF11O15085 1522 aa12.12□□□□□ -0.47
BRWD1P3-201ENST00000428816 LAMC3Q9Y6N6 1575 aa12.09□□□□□ -0.47
BRWD1P3-201ENST00000428816 PDS5BQ9NTI5 1447 aa12.08□□□□□ -0.48
BRWD1P3-201ENST00000428816 KIF21AQ7Z4S6 1674 aa12.06□□□□□ -0.48
BRWD1P3-201ENST00000428816 CYB5RLQ6IPT4 315 aa12.06□□□□□ -0.48
BRWD1P3-201ENST00000428816 ZCCHC6Q5VYS8 1495 aaKnown RBP12.05□□□□□ -0.48
BRWD1P3-201ENST00000428816 HMGXB3Q12766 1538 aa12.04□□□□□ -0.48
BRWD1P3-201ENST00000428816 ATAD2BQ9ULI0 1458 aa12.03□□□□□ -0.48
BRWD1P3-201ENST00000428816 WDR62O43379 1518 aa12.03□□□□□ -0.48
BRWD1P3-201ENST00000428816 RNF39Q9H2S5 420 aa12.03□□□□□ -0.48
BRWD1P3-201ENST00000428816 MRC2Q9UBG0 1479 aa12.02□□□□□ -0.49
BRWD1P3-201ENST00000428816 ARAP1Q96P48 1450 aa11.93□□□□□ -0.5
BRWD1P3-201ENST00000428816 CACNB1Q02641 598 aaPredicted RBP11.92□□□□□ -0.5
BRWD1P3-201ENST00000428816 BAZ1BQ9UIG0 1483 aaKnown RBP11.83□□□□□ -0.52
BRWD1P3-201ENST00000428816 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.83□□□□□ -0.52
BRWD1P3-201ENST00000428816 C1QBPQ07021 282 aaKnown RBP11.82□□□□□ -0.52
BRWD1P3-201ENST00000428816 CADPSQ9ULU8 1353 aa11.8□□□□□ -0.52
BRWD1P3-201ENST00000428816 RSF1Q96T23 1441 aaPredicted RBP11.78□□□□□ -0.52
BRWD1P3-201ENST00000428816 CEP164Q9UPV0 1460 aa11.76□□□□□ -0.53
BRWD1P3-201ENST00000428816 SMARCA4P51532 1647 aa11.73□□□□□ -0.53
BRWD1P3-201ENST00000428816 SLC4A2P04920 1241 aa11.7□□□□□ -0.54
BRWD1P3-201ENST00000428816 FBXO41Q8TF61 875 aa11.68□□□□□ -0.54
BRWD1P3-201ENST00000428816 PEG3Q9GZU2 1588 aa11.67□□□□□ -0.54
BRWD1P3-201ENST00000428816 KDM4FA0A1W2PPD8 638 aa11.67□□□□□ -0.54
BRWD1P3-201ENST00000428816 U3KPZ7 1027 aaPredicted RBP11.67□□□□□ -0.54
BRWD1P3-201ENST00000428816 LMTK3Q96Q04 1460 aa11.67□□□□□ -0.54
BRWD1P3-201ENST00000428816 FANCD2Q9BXW9 1451 aa11.64□□□□□ -0.55
BRWD1P3-201ENST00000428816 SOCS7O14512 581 aa11.64□□□□□ -0.55
BRWD1P3-201ENST00000428816 ERCC6L2Q5T890 1561 aa11.63□□□□□ -0.55
BRWD1P3-201ENST00000428816 ZNF608Q9ULD9 1512 aaPredicted RBP11.61□□□□□ -0.55
BRWD1P3-201ENST00000428816 URB2Q14146 1524 aaKnown RBP11.6□□□□□ -0.55
BRWD1P3-201ENST00000428816 IFT140Q96RY7 1462 aa11.58□□□□□ -0.56
BRWD1P3-201ENST00000428816 CHD1O14646 1710 aa11.55□□□□□ -0.56
BRWD1P3-201ENST00000428816 EIF4G3O43432 1585 aaKnown RBP11.5□□□□□ -0.57
BRWD1P3-201ENST00000428816 HECW2Q9P2P5 1572 aa11.5□□□□□ -0.57
BRWD1P3-201ENST00000428816 FBLN2P98095 1184 aa11.48□□□□□ -0.57
BRWD1P3-201ENST00000428816 SLC4A1APQ9BWU0 796 aaKnown RBP11.48□□□□□ -0.57
BRWD1P3-201ENST00000428816 CLASP1Q7Z460 1538 aa11.48□□□□□ -0.57
BRWD1P3-201ENST00000428816 ILDR2Q71H61 639 aa11.47□□□□□ -0.57
BRWD1P3-201ENST00000428816 SPINK5Q9NQ38 1064 aaPredicted RBP11.46□□□□□ -0.57
BRWD1P3-201ENST00000428816 CFTRP13569 1480 aa11.45□□□□□ -0.58
BRWD1P3-201ENST00000428816 GAPVD1Q14C86 1478 aa11.44□□□□□ -0.58
BRWD1P3-201ENST00000428816 AQRO60306 1485 aaKnown RBP eCLIP11.38□□□□□ -0.59
BRWD1P3-201ENST00000428816 SYNJ2O15056 1496 aa11.38□□□□□ -0.59
BRWD1P3-201ENST00000428816 SYNJ1O43426 1573 aa11.37□□□□□ -0.59
BRWD1P3-201ENST00000428816 KIF13AQ9H1H9 1805 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms