RNA–Protein interactions for RNA: ENST00000371804.3

IFIT1-201, Transcript of interferon induced protein with tetratricopeptide repeats 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFIT1, Length 1,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFIT1-201ENST00000371804 POTEDQ86YR6 584 aa14.76□□□□□ -0.05
IFIT1-201ENST00000371804 AEBP2Q6ZN18 517 aaPredicted RBP13.72□□□□□ -0.21
IFIT1-201ENST00000371804 CHIC1Q5VXU3 224 aa13.17□□□□□ -0.3
IFIT1-201ENST00000371804 SENP3Q9H4L4 574 aaPredicted RBP12.41□□□□□ -0.42
IFIT1-201ENST00000371804 NISCHQ9Y2I1 1504 aa11.97□□□□□ -0.49
IFIT1-201ENST00000371804 MSH5O43196 834 aa11.91□□□□□ -0.5
IFIT1-201ENST00000371804 PHF23Q9BUL5 403 aaPredicted RBP11.74□□□□□ -0.53
IFIT1-201ENST00000371804 FOXD1Q16676 465 aa11.53□□□□□ -0.56
IFIT1-201ENST00000371804 CACNB1Q02641 598 aaPredicted RBP11.24□□□□□ -0.61
IFIT1-201ENST00000371804 POTEHQ6S545 545 aa11.21□□□□□ -0.61
IFIT1-201ENST00000371804 ABCC9O60706 1549 aa11.06□□□□□ -0.64
IFIT1-201ENST00000371804 CCDC180Q9P1Z9 1646 aa10.86□□□□□ -0.67
IFIT1-201ENST00000371804 PELP1Q8IZL8 1130 aaKnown RBP10.63□□□□□ -0.71
IFIT1-201ENST00000371804 MYT1Q01538 1121 aa10.62□□□□□ -0.71
IFIT1-201ENST00000371804 DNAJC5BQ9UF47 199 aa10.57□□□□□ -0.72
IFIT1-201ENST00000371804 RB1CC1Q8TDY2 1594 aa10.43□□□□□ -0.74
IFIT1-201ENST00000371804 PIAS4Q8N2W9 510 aaPredicted RBP10.33□□□□□ -0.76
IFIT1-201ENST00000371804 TTBK1Q5TCY1 1321 aaPredicted RBP10.31□□□□□ -0.76
IFIT1-201ENST00000371804 NACADO15069 1562 aa10.3□□□□□ -0.76
IFIT1-201ENST00000371804 PABPN1Q86U42 306 aaKnown RBP eCLIP10.25□□□□□ -0.77
IFIT1-201ENST00000371804 SLC24A1O60721 1099 aa10.23□□□□□ -0.77
IFIT1-201ENST00000371804 UNC13AQ9UPW8 1703 aa10.23□□□□□ -0.77
IFIT1-201ENST00000371804 DCAF8L2P0C7V8 631 aa10.17□□□□□ -0.78
IFIT1-201ENST00000371804 BICRAQ9NZM4 1560 aa10.15□□□□□ -0.79
IFIT1-201ENST00000371804 MYO15BQ96JP2 1530 aa10.09□□□□□ -0.79
IFIT1-201ENST00000371804 CC2D2AQ9P2K1 1620 aa9.99□□□□□ -0.81
IFIT1-201ENST00000371804 CECR2Q9BXF3 1484 aa9.99□□□□□ -0.81
IFIT1-201ENST00000371804 SHROOM4Q9ULL8 1493 aa9.97□□□□□ -0.81
IFIT1-201ENST00000371804 PLSCR2Q9NRY7 297 aa9.95□□□□□ -0.82
IFIT1-201ENST00000371804 PRKCSHP14314 528 aaPredicted RBP9.94□□□□□ -0.82
IFIT1-201ENST00000371804 ERICH6Q7L0X2 663 aa9.92□□□□□ -0.82
IFIT1-201ENST00000371804 EIF4G1Q04637 1599 aaKnown RBP9.91□□□□□ -0.82
IFIT1-201ENST00000371804 ZCCHC6Q5VYS8 1495 aaKnown RBP9.88□□□□□ -0.83
IFIT1-201ENST00000371804 SCRIBQ14160 1630 aa9.88□□□□□ -0.83
IFIT1-201ENST00000371804 DCAF1Q9Y4B6 1507 aa9.88□□□□□ -0.83
IFIT1-201ENST00000371804 DNAJC5Q9H3Z4 198 aa9.86□□□□□ -0.83
IFIT1-201ENST00000371804 RNF39Q9H2S5 420 aa9.81□□□□□ -0.84
IFIT1-201ENST00000371804 APLP2Q06481 763 aa9.8□□□□□ -0.84
IFIT1-201ENST00000371804 C1QBPQ07021 282 aaKnown RBP9.71□□□□□ -0.85
IFIT1-201ENST00000371804 DAXXQ9UER7 740 aaPredicted RBP9.67□□□□□ -0.86
IFIT1-201ENST00000371804 CUX2O14529 1486 aa9.63□□□□□ -0.87
IFIT1-201ENST00000371804 SP7Q8TDD2 431 aaPredicted RBP9.62□□□□□ -0.87
IFIT1-201ENST00000371804 ERCC6Q03468 1493 aa9.56□□□□□ -0.88
IFIT1-201ENST00000371804 NCAPD3P42695 1498 aa9.5□□□□□ -0.89
IFIT1-201ENST00000371804 BCL11AQ9H165 835 aa9.49□□□□□ -0.89
IFIT1-201ENST00000371804 DMRT2Q9Y5R5 561 aa9.47□□□□□ -0.89
IFIT1-201ENST00000371804 ATAD2BQ9ULI0 1458 aa9.45□□□□□ -0.9
IFIT1-201ENST00000371804 NESP48681 1621 aa9.44□□□□□ -0.9
IFIT1-201ENST00000371804 HMGXB3Q12766 1538 aa9.43□□□□□ -0.9
IFIT1-201ENST00000371804 SMARCA2P51531 1590 aa9.41□□□□□ -0.9
IFIT1-201ENST00000371804 THOC2Q8NI27 1593 aaKnown RBP9.41□□□□□ -0.9
IFIT1-201ENST00000371804 SMARCA4P51532 1647 aa9.4□□□□□ -0.91
IFIT1-201ENST00000371804 BAZ1BQ9UIG0 1483 aaKnown RBP9.35□□□□□ -0.91
IFIT1-201ENST00000371804 LAMC3Q9Y6N6 1575 aa9.34□□□□□ -0.91
IFIT1-201ENST00000371804 TRIM41Q8WV44 630 aa9.34□□□□□ -0.91
IFIT1-201ENST00000371804 KIF21AQ7Z4S6 1674 aa9.33□□□□□ -0.92
IFIT1-201ENST00000371804 BAZ1AQ9NRL2 1556 aaPredicted RBP9.31□□□□□ -0.92
IFIT1-201ENST00000371804 PEG3Q9GZU2 1588 aa9.3□□□□□ -0.92
IFIT1-201ENST00000371804 EIF5BO60841 1220 aaKnown RBP9.3□□□□□ -0.92
IFIT1-201ENST00000371804 FAM9AQ8IZU1 332 aaPredicted RBP9.29□□□□□ -0.92
IFIT1-201ENST00000371804 PDS5BQ9NTI5 1447 aa9.27□□□□□ -0.93
IFIT1-201ENST00000371804 PLPPR3Q6T4P5 718 aa9.27□□□□□ -0.93
IFIT1-201ENST00000371804 MROH2BQ7Z745 1585 aa9.23□□□□□ -0.93
IFIT1-201ENST00000371804 MRC2Q9UBG0 1479 aa9.22□□□□□ -0.93
IFIT1-201ENST00000371804 WDR62O43379 1518 aa9.22□□□□□ -0.93
IFIT1-201ENST00000371804 HRCP23327 699 aa9.2□□□□□ -0.94
IFIT1-201ENST00000371804 CADPSQ9ULU8 1353 aa9.2□□□□□ -0.94
IFIT1-201ENST00000371804 SCAF1Q9H7N4 1312 aaKnown RBP9.17□□□□□ -0.94
IFIT1-201ENST00000371804 CEP164Q9UPV0 1460 aa9.14□□□□□ -0.95
IFIT1-201ENST00000371804 OSCARQ8IYS5 282 aa9.13□□□□□ -0.95
IFIT1-201ENST00000371804 CENPBP07199 599 aaPredicted RBP9.12□□□□□ -0.95
IFIT1-201ENST00000371804 FANCD2Q9BXW9 1451 aa9.11□□□□□ -0.95
IFIT1-201ENST00000371804 WIZO95785 1651 aa9.11□□□□□ -0.95
IFIT1-201ENST00000371804 RIMBP3CA6NJZ7 1639 aa9.07□□□□□ -0.96
IFIT1-201ENST00000371804 RIMBP3BA6NNM3 1639 aa9.07□□□□□ -0.96
IFIT1-201ENST00000371804 RIMBP3Q9UFD9 1639 aa9.07□□□□□ -0.96
IFIT1-201ENST00000371804 NCBP3Q53F19 620 aaKnown RBP9.06□□□□□ -0.96
IFIT1-201ENST00000371804 CFTRP13569 1480 aa9.06□□□□□ -0.96
IFIT1-201ENST00000371804 PPP6R1Q9UPN7 881 aa9.06□□□□□ -0.96
IFIT1-201ENST00000371804 URB2Q14146 1524 aaKnown RBP9.06□□□□□ -0.96
IFIT1-201ENST00000371804 ARHGEF11O15085 1522 aa9.01□□□□□ -0.97
IFIT1-201ENST00000371804 ZNF608Q9ULD9 1512 aaPredicted RBP8.98□□□□□ -0.97
IFIT1-201ENST00000371804 PRDM2Q13029 1718 aa8.98□□□□□ -0.97
IFIT1-201ENST00000371804 TOP2AP11388 1531 aaKnown RBP8.98□□□□□ -0.97
IFIT1-201ENST00000371804 IFT140Q96RY7 1462 aa8.97□□□□□ -0.97
IFIT1-201ENST00000371804 ADRA2BP18089 450 aa8.97□□□□□ -0.97
IFIT1-201ENST00000371804 PLEKHG5O94827 1062 aa8.96□□□□□ -0.97
IFIT1-201ENST00000371804 RANGAP1P46060 587 aaPredicted RBP8.96□□□□□ -0.97
IFIT1-201ENST00000371804 LHX8Q68G74 356 aa8.95□□□□□ -0.98
IFIT1-201ENST00000371804 RSF1Q96T23 1441 aaPredicted RBP8.94□□□□□ -0.98
IFIT1-201ENST00000371804 EIF4G3O43432 1585 aaKnown RBP8.93□□□□□ -0.98
IFIT1-201ENST00000371804 CYB5RLQ6IPT4 315 aa8.93□□□□□ -0.98
IFIT1-201ENST00000371804 DCAF8L1A6NGE4 600 aa8.91□□□□□ -0.98
IFIT1-201ENST00000371804 TOPBP1Q92547 1522 aa8.91□□□□□ -0.98
IFIT1-201ENST00000371804 CHD1O14646 1710 aa8.91□□□□□ -0.98
IFIT1-201ENST00000371804 ARAP1Q96P48 1450 aa8.91□□□□□ -0.98
IFIT1-201ENST00000371804 TRHP20396 242 aaPredicted RBP8.9□□□□□ -0.98
IFIT1-201ENST00000371804 PODXL2Q9NZ53 605 aa8.89□□□□□ -0.99
IFIT1-201ENST00000371804 UBE2Q2Q8WVN8 375 aa8.89□□□□□ -0.99
IFIT1-201ENST00000371804 ARXQ96QS3 562 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms