RNA–Protein interactions for RNA: ENST00000623225.1

CU638689.1-201, humanhuman

TSL 3 BASIC

Gene CU638689.1, Length 897 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CU638689.1-201ENST00000623225 AEBP2Q6ZN18 517 aaPredicted RBP31.71■■■□□ 2.67
CU638689.1-201ENST00000623225 CHIC1Q5VXU3 224 aa30.35■■■□□ 2.45
CU638689.1-201ENST00000623225 SENP3Q9H4L4 574 aaPredicted RBP26.84■■□□□ 1.89
CU638689.1-201ENST00000623225 PHF23Q9BUL5 403 aaPredicted RBP26.72■■□□□ 1.87
CU638689.1-201ENST00000623225 FOXD1Q16676 465 aa25.08■■□□□ 1.61
CU638689.1-201ENST00000623225 PLPPR3Q6T4P5 718 aa24.35■■□□□ 1.49
CU638689.1-201ENST00000623225 PPP6R1Q9UPN7 881 aa23.78■■□□□ 1.4
CU638689.1-201ENST00000623225 ADRA2BP18089 450 aa23.72■■□□□ 1.39
CU638689.1-201ENST00000623225 PIAS4Q8N2W9 510 aaPredicted RBP23.5■■□□□ 1.35
CU638689.1-201ENST00000623225 MSH5O43196 834 aa23.22■■□□□ 1.31
CU638689.1-201ENST00000623225 POTEDQ86YR6 584 aa22.2■■□□□ 1.14
CU638689.1-201ENST00000623225 MAPK8IP2Q13387 824 aaPredicted RBP21.72■■□□□ 1.07
CU638689.1-201ENST00000623225 SCAF1Q9H7N4 1312 aaKnown RBP21.51■■□□□ 1.03
CU638689.1-201ENST00000623225 PPP4R3CPQ6ZMV5 832 aa21.46■■□□□ 1.03
CU638689.1-201ENST00000623225 DMRT2Q9Y5R5 561 aa21.37■■□□□ 1.01
CU638689.1-201ENST00000623225 CNKSR2Q8WXI2 1034 aa20.92■□□□□ 0.94
CU638689.1-201ENST00000623225 HOXD11P31277 338 aaPredicted RBP20.71■□□□□ 0.91
CU638689.1-201ENST00000623225 NCBP3Q53F19 620 aaKnown RBP20.63■□□□□ 0.89
CU638689.1-201ENST00000623225 RNF216Q9NWF9 866 aaPredicted RBP20.63■□□□□ 0.89
CU638689.1-201ENST00000623225 DCAF8L1A6NGE4 600 aa20.56■□□□□ 0.88
CU638689.1-201ENST00000623225 NPM3O75607 178 aaKnown RBP20.45■□□□□ 0.86
CU638689.1-201ENST00000623225 KCNA4P22459 653 aa20.41■□□□□ 0.86
CU638689.1-201ENST00000623225 RNF39Q9H2S5 420 aa19.9■□□□□ 0.78
CU638689.1-201ENST00000623225 CACNB1Q02641 598 aaPredicted RBP19.8■□□□□ 0.76
CU638689.1-201ENST00000623225 DNAJC5BQ9UF47 199 aa19.8■□□□□ 0.76
CU638689.1-201ENST00000623225 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.76■□□□□ 0.75
CU638689.1-201ENST00000623225 C1QBPQ07021 282 aaKnown RBP19.57■□□□□ 0.72
CU638689.1-201ENST00000623225 SLC4A2P04920 1241 aa19.47■□□□□ 0.71
CU638689.1-201ENST00000623225 U3KPZ7 1027 aaPredicted RBP19.42■□□□□ 0.7
CU638689.1-201ENST00000623225 SLC4A1APQ9BWU0 796 aaKnown RBP19.28■□□□□ 0.68
CU638689.1-201ENST00000623225 SPINK5Q9NQ38 1064 aaPredicted RBP19.08■□□□□ 0.64
CU638689.1-201ENST00000623225 CAPN15O75808 1086 aa18.98■□□□□ 0.63
CU638689.1-201ENST00000623225 FOXD4L1Q9NU39 408 aa18.85■□□□□ 0.61
CU638689.1-201ENST00000623225 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.83■□□□□ 0.6
CU638689.1-201ENST00000623225 MYCNP04198 464 aaPredicted RBP18.83■□□□□ 0.6
CU638689.1-201ENST00000623225 HNRNPUL2Q1KMD3 747 aaKnown RBP18.83■□□□□ 0.6
CU638689.1-201ENST00000623225 ZBTB22O15209 634 aa18.8■□□□□ 0.6
CU638689.1-201ENST00000623225 TRHP20396 242 aaPredicted RBP18.79■□□□□ 0.6
CU638689.1-201ENST00000623225 DSG3P32926 999 aa18.78■□□□□ 0.6
CU638689.1-201ENST00000623225 SAMD1Q6SPF0 538 aaPredicted RBP18.78■□□□□ 0.6
CU638689.1-201ENST00000623225 APLP2Q06481 763 aa18.72■□□□□ 0.59
CU638689.1-201ENST00000623225 ABCB7O75027 752 aa18.64■□□□□ 0.57
CU638689.1-201ENST00000623225 ZNF219Q9P2Y4 722 aaPredicted RBP18.64■□□□□ 0.57
CU638689.1-201ENST00000623225 ATF5Q9Y2D1 282 aaPredicted RBP18.53■□□□□ 0.56
CU638689.1-201ENST00000623225 POLA2Q14181 598 aa18.34■□□□□ 0.53
CU638689.1-201ENST00000623225 CSRNP3Q8WYN3 585 aa18.21■□□□□ 0.51
CU638689.1-201ENST00000623225 EHMT2Q96KQ7 1210 aa18.2■□□□□ 0.5
CU638689.1-201ENST00000623225 ATXN8OSP0DMR3 200 aa18.15■□□□□ 0.5
CU638689.1-201ENST00000623225 ZBTB12Q9Y330 459 aaPredicted RBP17.84■□□□□ 0.45
CU638689.1-201ENST00000623225 RBM42Q9BTD8 480 aaKnown RBP17.79■□□□□ 0.44
CU638689.1-201ENST00000623225 OSCARQ8IYS5 282 aa17.76■□□□□ 0.43
CU638689.1-201ENST00000623225 MKRN4PQ13434 485 aaPredicted RBP17.65■□□□□ 0.42
CU638689.1-201ENST00000623225 FBLN2P98095 1184 aa17.62■□□□□ 0.41
CU638689.1-201ENST00000623225 AKT1S1Q96B36 256 aa17.5■□□□□ 0.39
CU638689.1-201ENST00000623225 POTEHQ6S545 545 aa17.44■□□□□ 0.38
CU638689.1-201ENST00000623225 REM2Q8IYK8 340 aaPredicted RBP17.4■□□□□ 0.38
CU638689.1-201ENST00000623225 SPDYE2BA6NHP3 402 aa17.38■□□□□ 0.37
CU638689.1-201ENST00000623225 SPDYE6P0CI01 402 aa17.38■□□□□ 0.37
CU638689.1-201ENST00000623225 SPDYE2Q495Y8 402 aa17.38■□□□□ 0.37
CU638689.1-201ENST00000623225 CHRDL2Q6WN34 429 aa17.36■□□□□ 0.37
CU638689.1-201ENST00000623225 ZNF692Q9BU19 519 aaPredicted RBP17.29■□□□□ 0.36
CU638689.1-201ENST00000623225 PITPNM1O00562 1244 aa17.23■□□□□ 0.35
CU638689.1-201ENST00000623225 SSUH2Q9Y2M2 353 aa17.23■□□□□ 0.35
CU638689.1-201ENST00000623225 PABPN1Q86U42 306 aaKnown RBP eCLIP17.07■□□□□ 0.32
CU638689.1-201ENST00000623225 PIP4P2Q8N4L2 257 aa17.06■□□□□ 0.32
CU638689.1-201ENST00000623225 CLEC11AQ9Y240 323 aa17.05■□□□□ 0.32
CU638689.1-201ENST00000623225 SPDYE1Q8NFV5 336 aaPredicted RBP17■□□□□ 0.31
CU638689.1-201ENST00000623225 FXR2P51116 673 aaKnown RBP eCLIP16.97■□□□□ 0.31
CU638689.1-201ENST00000623225 SPDYE4A6NLX3 237 aa16.94■□□□□ 0.3
CU638689.1-201ENST00000623225 PRKAR2AP13861 404 aaKnown RBP16.78■□□□□ 0.28
CU638689.1-201ENST00000623225 PRR29P0C7W0 189 aa16.76■□□□□ 0.27
CU638689.1-201ENST00000623225 CHADLQ6NUI6 762 aa16.74■□□□□ 0.27
CU638689.1-201ENST00000623225 HAX1O00165 279 aa16.64■□□□□ 0.25
CU638689.1-201ENST00000623225 EVX2Q03828 476 aa16.56■□□□□ 0.24
CU638689.1-201ENST00000623225 STAG3Q9UJ98 1225 aa16.55■□□□□ 0.24
CU638689.1-201ENST00000623225 PROM2Q8N271 834 aa16.54■□□□□ 0.24
CU638689.1-201ENST00000623225 FKBP8Q14318 412 aa16.49■□□□□ 0.23
CU638689.1-201ENST00000623225 SP7Q8TDD2 431 aaPredicted RBP16.49■□□□□ 0.23
CU638689.1-201ENST00000623225 CREBZFQ9NS37 354 aa16.47■□□□□ 0.23
CU638689.1-201ENST00000623225 FARP1Q9Y4F1 1045 aaPredicted RBP16.44■□□□□ 0.22
CU638689.1-201ENST00000623225 C19orf67A6NJJ6 358 aa16.42■□□□□ 0.22
CU638689.1-201ENST00000623225 CD44P16070 742 aaKnown RBP16.26■□□□□ 0.19
CU638689.1-201ENST00000623225 MNX1P50219 401 aaPredicted RBP16.23■□□□□ 0.19
CU638689.1-201ENST00000623225 GABBR2O75899 941 aa16.12■□□□□ 0.17
CU638689.1-201ENST00000623225 MIER1Q8N108 512 aa16.12■□□□□ 0.17
CU638689.1-201ENST00000623225 ZRANB1Q9UGI0 708 aa16.1■□□□□ 0.17
CU638689.1-201ENST00000623225 NPM1P06748 294 aaKnown RBP eCLIP16.08■□□□□ 0.16
CU638689.1-201ENST00000623225 PLCD3Q8N3E9 789 aa16.03■□□□□ 0.16
CU638689.1-201ENST00000623225 ZNF579Q8NAF0 562 aaKnown RBP15.98■□□□□ 0.15
CU638689.1-201ENST00000623225 PLEKHG5O94827 1062 aa15.97■□□□□ 0.15
CU638689.1-201ENST00000623225 PHF12Q96QT6 1004 aa15.95■□□□□ 0.14
CU638689.1-201ENST00000623225 PAK3O75914 559 aaPredicted RBP15.94■□□□□ 0.14
CU638689.1-201ENST00000623225 TSPYL2Q9H2G4 693 aaPredicted RBP15.93■□□□□ 0.14
CU638689.1-201ENST00000623225 FBXO3Q9UK99 471 aa15.91■□□□□ 0.14
CU638689.1-201ENST00000623225 RASEFQ8IZ41 740 aa15.87■□□□□ 0.13
CU638689.1-201ENST00000623225 GALR2O43603 387 aaPredicted RBP15.86■□□□□ 0.13
CU638689.1-201ENST00000623225 POTEIP0CG38 1075 aa15.84■□□□□ 0.13
CU638689.1-201ENST00000623225 VASPP50552 380 aaPredicted RBP15.8■□□□□ 0.12
CU638689.1-201ENST00000623225 CLCN6P51797 869 aa15.79■□□□□ 0.12
CU638689.1-201ENST00000623225 NUBP1P53384 320 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 774.2 ms