RNA–Protein interactions for RNA: ENST00000412654.1

PCA3-201, Transcript of prostate cancer associated 3, humanhuman

TSL 1 (best) BASIC

Gene PCA3, Length 3,922 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCA3-201ENST00000412654 NISCHQ9Y2I1 1504 aa13.21□□□□□ -0.29
PCA3-201ENST00000412654 CHIC1Q5VXU3 224 aa11.94□□□□□ -0.5
PCA3-201ENST00000412654 CCDC180Q9P1Z9 1646 aa11.84□□□□□ -0.51
PCA3-201ENST00000412654 AEBP2Q6ZN18 517 aaPredicted RBP11.61□□□□□ -0.55
PCA3-201ENST00000412654 DCAF1Q9Y4B6 1507 aa11.48□□□□□ -0.57
PCA3-201ENST00000412654 ZCCHC6Q5VYS8 1495 aaKnown RBP11.37□□□□□ -0.59
PCA3-201ENST00000412654 MYO15BQ96JP2 1530 aa11.23□□□□□ -0.61
PCA3-201ENST00000412654 PHF23Q9BUL5 403 aaPredicted RBP11.07□□□□□ -0.64
PCA3-201ENST00000412654 ABCC9O60706 1549 aa10.83□□□□□ -0.68
PCA3-201ENST00000412654 SLC24A1O60721 1099 aa10.74□□□□□ -0.69
PCA3-201ENST00000412654 EIF4G1Q04637 1599 aaKnown RBP10.69□□□□□ -0.7
PCA3-201ENST00000412654 NACADO15069 1562 aa10.53□□□□□ -0.72
PCA3-201ENST00000412654 RB1CC1Q8TDY2 1594 aa10.49□□□□□ -0.73
PCA3-201ENST00000412654 PEG3Q9GZU2 1588 aa10.4□□□□□ -0.74
PCA3-201ENST00000412654 BAZ1AQ9NRL2 1556 aaPredicted RBP10.4□□□□□ -0.74
PCA3-201ENST00000412654 UNC13AQ9UPW8 1703 aa10.39□□□□□ -0.75
PCA3-201ENST00000412654 PLPPR3Q6T4P5 718 aa10.38□□□□□ -0.75
PCA3-201ENST00000412654 SHROOM4Q9ULL8 1493 aa10.31□□□□□ -0.76
PCA3-201ENST00000412654 CSRNP3Q8WYN3 585 aa10.27□□□□□ -0.77
PCA3-201ENST00000412654 RSF1Q96T23 1441 aaPredicted RBP10.24□□□□□ -0.77
PCA3-201ENST00000412654 EHMT2Q96KQ7 1210 aa10.18□□□□□ -0.78
PCA3-201ENST00000412654 TOP2AP11388 1531 aaKnown RBP10.17□□□□□ -0.78
PCA3-201ENST00000412654 PRDM2Q13029 1718 aa10.15□□□□□ -0.78
PCA3-201ENST00000412654 SMARCA4P51532 1647 aa10.13□□□□□ -0.79
PCA3-201ENST00000412654 KCNA4P22459 653 aa10.12□□□□□ -0.79
PCA3-201ENST00000412654 RTN4Q9NQC3 1192 aaKnown RBP10.09□□□□□ -0.79
PCA3-201ENST00000412654 WRNQ14191 1432 aaPredicted RBP eCLIP10.08□□□□□ -0.8
PCA3-201ENST00000412654 SCRIBQ14160 1630 aa10.08□□□□□ -0.8
PCA3-201ENST00000412654 SMARCA2P51531 1590 aa10.06□□□□□ -0.8
PCA3-201ENST00000412654 WIZO95785 1651 aa10.05□□□□□ -0.8
PCA3-201ENST00000412654 HRCP23327 699 aa10.04□□□□□ -0.8
PCA3-201ENST00000412654 MROH2BQ7Z745 1585 aa10.04□□□□□ -0.8
PCA3-201ENST00000412654 BICRAQ9NZM4 1560 aa10.03□□□□□ -0.8
PCA3-201ENST00000412654 KIF21BO75037 1637 aa10.02□□□□□ -0.81
PCA3-201ENST00000412654 BIVM-ERCC5R4GMW8 1640 aa10.01□□□□□ -0.81
PCA3-201ENST00000412654 EEA1Q15075 1411 aa9.93□□□□□ -0.82
PCA3-201ENST00000412654 CECR2Q9BXF3 1484 aa9.85□□□□□ -0.83
PCA3-201ENST00000412654 HMGXB3Q12766 1538 aa9.85□□□□□ -0.83
PCA3-201ENST00000412654 BAZ1BQ9UIG0 1483 aaKnown RBP9.84□□□□□ -0.83
PCA3-201ENST00000412654 TOP2BQ02880 1626 aa9.81□□□□□ -0.84
PCA3-201ENST00000412654 ERICH3Q5RHP9 1530 aa9.81□□□□□ -0.84
PCA3-201ENST00000412654 ZBTB22O15209 634 aa9.77□□□□□ -0.84
PCA3-201ENST00000412654 CUX2O14529 1486 aa9.76□□□□□ -0.85
PCA3-201ENST00000412654 CCDC88BA6NC98 1476 aa9.75□□□□□ -0.85
PCA3-201ENST00000412654 NCBP3Q53F19 620 aaKnown RBP9.74□□□□□ -0.85
PCA3-201ENST00000412654 SYNJ1O43426 1573 aa9.74□□□□□ -0.85
PCA3-201ENST00000412654 MAP3K1Q13233 1512 aa9.73□□□□□ -0.85
PCA3-201ENST00000412654 TRIM26Q12899 539 aaPredicted RBP9.69□□□□□ -0.86
PCA3-201ENST00000412654 TNIKQ9UKE5 1360 aa9.69□□□□□ -0.86
PCA3-201ENST00000412654 ZEB1P37275 1124 aaPredicted RBP9.68□□□□□ -0.86
PCA3-201ENST00000412654 WDR97A6NE52 1622 aa9.68□□□□□ -0.86
PCA3-201ENST00000412654 ADRA2BP18089 450 aa9.66□□□□□ -0.86
PCA3-201ENST00000412654 AMER1Q5JTC6 1135 aaPredicted RBP9.65□□□□□ -0.86
PCA3-201ENST00000412654 KIF21AQ7Z4S6 1674 aa9.64□□□□□ -0.87
PCA3-201ENST00000412654 CFAP43Q8NDM7 1665 aa9.64□□□□□ -0.87
PCA3-201ENST00000412654 ATAD2BQ9ULI0 1458 aa9.59□□□□□ -0.87
PCA3-201ENST00000412654 SUPT5HO00267 1087 aaKnown RBP9.59□□□□□ -0.87
PCA3-201ENST00000412654 GOLGA3Q08378 1498 aa9.58□□□□□ -0.88
PCA3-201ENST00000412654 PRXQ9BXM0 1461 aa9.58□□□□□ -0.88
PCA3-201ENST00000412654 NCAPD3P42695 1498 aa9.57□□□□□ -0.88
PCA3-201ENST00000412654 CEP164Q9UPV0 1460 aa9.56□□□□□ -0.88
PCA3-201ENST00000412654 ABCC8Q09428 1581 aa9.55□□□□□ -0.88
PCA3-201ENST00000412654 CC2D2AQ9P2K1 1620 aa9.5□□□□□ -0.89
PCA3-201ENST00000412654 CEP162Q5TB80 1403 aa9.49□□□□□ -0.89
PCA3-201ENST00000412654 CTTNBP2Q8WZ74 1663 aa9.48□□□□□ -0.89
PCA3-201ENST00000412654 THOC2Q8NI27 1593 aaKnown RBP9.47□□□□□ -0.89
PCA3-201ENST00000412654 CFTRP13569 1480 aa9.47□□□□□ -0.89
PCA3-201ENST00000412654 POLR1AO95602 1720 aaPredicted RBP9.47□□□□□ -0.89
PCA3-201ENST00000412654 RRBP1Q9P2E9 1410 aaKnown RBP9.47□□□□□ -0.89
PCA3-201ENST00000412654 CUL7Q14999 1698 aa9.46□□□□□ -0.9
PCA3-201ENST00000412654 CLSPNQ9HAW4 1339 aa9.45□□□□□ -0.9
PCA3-201ENST00000412654 VPS8Q8N3P4 1428 aa9.44□□□□□ -0.9
PCA3-201ENST00000412654 AQRO60306 1485 aaKnown RBP eCLIP9.44□□□□□ -0.9
PCA3-201ENST00000412654 PELP1Q8IZL8 1130 aaKnown RBP9.43□□□□□ -0.9
PCA3-201ENST00000412654 CUX1P39880 1505 aa9.43□□□□□ -0.9
PCA3-201ENST00000412654 ARAP1Q96P48 1450 aa9.43□□□□□ -0.9
PCA3-201ENST00000412654 SAMD9Q5K651 1589 aa9.42□□□□□ -0.9
PCA3-201ENST00000412654 DAXXQ9UER7 740 aaPredicted RBP9.41□□□□□ -0.9
PCA3-201ENST00000412654 PRKCSHP14314 528 aaPredicted RBP9.41□□□□□ -0.9
PCA3-201ENST00000412654 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.41□□□□□ -0.9
PCA3-201ENST00000412654 LRRIQ1Q96JM4 1722 aa9.41□□□□□ -0.9
PCA3-201ENST00000412654 EFCAB5A4FU69 1503 aa9.38□□□□□ -0.91
PCA3-201ENST00000412654 ABCA5Q8WWZ7 1642 aa9.38□□□□□ -0.91
PCA3-201ENST00000412654 ARHGEF11O15085 1522 aa9.38□□□□□ -0.91
PCA3-201ENST00000412654 SOGA1O94964 1423 aa9.37□□□□□ -0.91
PCA3-201ENST00000412654 RUSC2Q8N2Y8 1516 aa9.35□□□□□ -0.91
PCA3-201ENST00000412654 TIAM1Q13009 1591 aa9.35□□□□□ -0.91
PCA3-201ENST00000412654 SLC4A1APQ9BWU0 796 aaKnown RBP9.35□□□□□ -0.91
PCA3-201ENST00000412654 GCC2Q8IWJ2 1684 aa9.35□□□□□ -0.91
PCA3-201ENST00000412654 CLIP1P30622 1438 aa9.34□□□□□ -0.91
PCA3-201ENST00000412654 TRIM41Q8WV44 630 aa9.32□□□□□ -0.92
PCA3-201ENST00000412654 LOC105371045A0A1W2PR82 267 aa9.32□□□□□ -0.92
PCA3-201ENST00000412654 PCGF6Q9BYE7 350 aa9.32□□□□□ -0.92
PCA3-201ENST00000412654 DNMBPQ6XZF7 1577 aa9.31□□□□□ -0.92
PCA3-201ENST00000412654 PPP6R1Q9UPN7 881 aa9.3□□□□□ -0.92
PCA3-201ENST00000412654 RAPGEF2Q9Y4G8 1499 aa9.27□□□□□ -0.92
PCA3-201ENST00000412654 ABCA10Q8WWZ4 1543 aa9.27□□□□□ -0.93
PCA3-201ENST00000412654 MAPKBP1O60336 1514 aa9.27□□□□□ -0.93
PCA3-201ENST00000412654 HECW1Q76N89 1606 aa9.26□□□□□ -0.93
PCA3-201ENST00000412654 KDM5BQ9UGL1 1544 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms