Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC2.35□□□□□ -2.03
USH2AO75445 SORBS2-201ENST00000284776 5996 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC2.35□□□□□ -2.03
USH2AO75445 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC2.35□□□□□ -2.03
USH2AO75445 CAMK4-201ENST00000282356 12240 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC2.35□□□□□ -2.03
USH2AO75445 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 CDC123-202ENST00000378900 933 ntTSL 5 BASIC2.35□□□□□ -2.03
USH2AO75445 PTMAP5-201ENST00000393073 333 ntBASIC2.35□□□□□ -2.03
USH2AO75445 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 RSU1P3-201ENST00000412878 835 ntBASIC2.35□□□□□ -2.03
USH2AO75445 EI24P4-201ENST00000423683 1078 ntBASIC2.35□□□□□ -2.03
USH2AO75445 H3F3BP1-201ENST00000440551 403 ntBASIC2.35□□□□□ -2.03
USH2AO75445 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC2.35□□□□□ -2.03
USH2AO75445 RPL7L1P8-201ENST00000469911 741 ntBASIC2.35□□□□□ -2.03
USH2AO75445 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC2.35□□□□□ -2.03
USH2AO75445 AP000619.2-201ENST00000546014 969 ntBASIC2.35□□□□□ -2.03
USH2AO75445 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC2.35□□□□□ -2.03
USH2AO75445 AC005341.1-201ENST00000571086 708 ntBASIC2.35□□□□□ -2.03
USH2AO75445 AP005901.4-201ENST00000577336 569 ntBASIC2.35□□□□□ -2.03
USH2AO75445 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC2.35□□□□□ -2.03
USH2AO75445 AC020915.5-201ENST00000596836 964 ntBASIC2.35□□□□□ -2.03
USH2AO75445 MIR6853-201ENST00000619642 74 ntBASIC2.35□□□□□ -2.03
USH2AO75445 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
USH2AO75445 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
USH2AO75445 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC2.35□□□□□ -2.03
USH2AO75445 RPRD2-203ENST00000401000 7605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 CDC42BPA-205ENST00000366769 10855 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 MYLK-205ENST00000360772 10027 ntAPPRIS P3 TSL 5 BASIC2.35□□□□□ -2.03
USH2AO75445 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC2.35□□□□□ -2.03
USH2AO75445 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
USH2AO75445 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 MAPK10-263ENST00000641052 4307 ntBASIC2.35□□□□□ -2.03
USH2AO75445 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
USH2AO75445 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC2.35□□□□□ -2.03
USH2AO75445 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
USH2AO75445 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
USH2AO75445 AL590762.2-201ENST00000395798 571 ntBASIC2.35□□□□□ -2.03
USH2AO75445 CYP2AC1P-201ENST00000407830 1173 ntBASIC2.35□□□□□ -2.03
USH2AO75445 RN7SKP106-201ENST00000410832 272 ntBASIC2.35□□□□□ -2.03
USH2AO75445 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC2.35□□□□□ -2.03
USH2AO75445 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC2.35□□□□□ -2.03
USH2AO75445 AL354766.1-201ENST00000423396 542 ntBASIC2.35□□□□□ -2.03
USH2AO75445 TPM3P3-201ENST00000521343 354 ntBASIC2.35□□□□□ -2.03
USH2AO75445 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC2.35□□□□□ -2.03
USH2AO75445 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC2.35□□□□□ -2.03
USH2AO75445 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC2.35□□□□□ -2.03
USH2AO75445 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC2.35□□□□□ -2.03
USH2AO75445 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 MT-RNR2-201ENST00000387347 1559 ntBASIC2.35□□□□□ -2.03
USH2AO75445 GPR26-201ENST00000284674 7514 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 GOLGA3-202ENST00000450791 8870 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 ALB-214ENST00000509063 1911 ntTSL 5 BASIC2.35□□□□□ -2.03
USH2AO75445 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 SDAD1P1-202ENST00000524156 2051 ntBASIC2.35□□□□□ -2.03
USH2AO75445 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC2.35□□□□□ -2.03
USH2AO75445 NRK-204ENST00000540278 1687 ntTSL 2 BASIC2.35□□□□□ -2.03
USH2AO75445 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC2.35□□□□□ -2.03
USH2AO75445 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
USH2AO75445 RPL23AP59-201ENST00000399415 461 ntBASIC2.35□□□□□ -2.03
USH2AO75445 ATG4AP1-201ENST00000416893 538 ntBASIC2.35□□□□□ -2.03
USH2AO75445 DDX39BP1-205ENST00000422507 192 ntBASIC2.35□□□□□ -2.03
USH2AO75445 RPS12P10-201ENST00000427031 377 ntBASIC2.35□□□□□ -2.03
USH2AO75445 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC2.35□□□□□ -2.03
USH2AO75445 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.35□□□□□ -2.03
USH2AO75445 MRPL49P2-201ENST00000521066 465 ntBASIC2.35□□□□□ -2.03
USH2AO75445 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC2.35□□□□□ -2.03
USH2AO75445 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.35□□□□□ -2.03
USH2AO75445 NANOGP3-201ENST00000605855 286 ntBASIC2.35□□□□□ -2.03
USH2AO75445 AC244100.1-202ENST00000621554 382 ntBASIC2.35□□□□□ -2.03
USH2AO75445 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
USH2AO75445 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
USH2AO75445 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 ATMIN-206ENST00000566488 5343 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 OR5P1P-201ENST00000299512 925 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms