RNA–Protein interactions for RNA: ENST00000297439.3

DEFB1-201, Transcript of defensin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEFB1, Length 478 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB1-201ENST00000297439 AEBP2Q6ZN18 517 aaPredicted RBP18.03■□□□□ 0.48
DEFB1-201ENST00000297439 CHIC1Q5VXU3 224 aa17■□□□□ 0.31
DEFB1-201ENST00000297439 SENP3Q9H4L4 574 aaPredicted RBP15.45■□□□□ 0.06
DEFB1-201ENST00000297439 PHF23Q9BUL5 403 aaPredicted RBP15.21■□□□□ 0.03
DEFB1-201ENST00000297439 FOXD1Q16676 465 aa14.38□□□□□ -0.11
DEFB1-201ENST00000297439 NISCHQ9Y2I1 1504 aa14.17□□□□□ -0.14
DEFB1-201ENST00000297439 MSH5O43196 834 aa13.55□□□□□ -0.24
DEFB1-201ENST00000297439 PLPPR3Q6T4P5 718 aa13.53□□□□□ -0.24
DEFB1-201ENST00000297439 POTEDQ86YR6 584 aa13.45□□□□□ -0.26
DEFB1-201ENST00000297439 PIAS4Q8N2W9 510 aaPredicted RBP13.41□□□□□ -0.26
DEFB1-201ENST00000297439 PPP6R1Q9UPN7 881 aa13.32□□□□□ -0.28
DEFB1-201ENST00000297439 ADRA2BP18089 450 aa13.27□□□□□ -0.29
DEFB1-201ENST00000297439 CCDC180Q9P1Z9 1646 aa12.26□□□□□ -0.45
DEFB1-201ENST00000297439 MAPK8IP2Q13387 824 aaPredicted RBP12.23□□□□□ -0.45
DEFB1-201ENST00000297439 DMRT2Q9Y5R5 561 aa12.22□□□□□ -0.45
DEFB1-201ENST00000297439 SCAF1Q9H7N4 1312 aaKnown RBP12.19□□□□□ -0.46
DEFB1-201ENST00000297439 ZCCHC6Q5VYS8 1495 aaKnown RBP12.02□□□□□ -0.49
DEFB1-201ENST00000297439 DCAF1Q9Y4B6 1507 aa11.85□□□□□ -0.51
DEFB1-201ENST00000297439 PPP4R3CPQ6ZMV5 832 aa11.83□□□□□ -0.52
DEFB1-201ENST00000297439 DCAF8L1A6NGE4 600 aa11.71□□□□□ -0.53
DEFB1-201ENST00000297439 HOXD11P31277 338 aaPredicted RBP11.71□□□□□ -0.53
DEFB1-201ENST00000297439 CACNB1Q02641 598 aaPredicted RBP11.7□□□□□ -0.54
DEFB1-201ENST00000297439 CNKSR2Q8WXI2 1034 aa11.65□□□□□ -0.54
DEFB1-201ENST00000297439 MYO15BQ96JP2 1530 aa11.6□□□□□ -0.55
DEFB1-201ENST00000297439 RNF216Q9NWF9 866 aaPredicted RBP11.58□□□□□ -0.56
DEFB1-201ENST00000297439 SHROOM4Q9ULL8 1493 aa11.57□□□□□ -0.56
DEFB1-201ENST00000297439 RNF39Q9H2S5 420 aa11.53□□□□□ -0.56
DEFB1-201ENST00000297439 C1QBPQ07021 282 aaKnown RBP11.38□□□□□ -0.59
DEFB1-201ENST00000297439 DNAJC5BQ9UF47 199 aa11.37□□□□□ -0.59
DEFB1-201ENST00000297439 NCBP3Q53F19 620 aaKnown RBP11.35□□□□□ -0.59
DEFB1-201ENST00000297439 SUPT5HO00267 1087 aaKnown RBP11.33□□□□□ -0.6
DEFB1-201ENST00000297439 ABCC9O60706 1549 aa11.32□□□□□ -0.6
DEFB1-201ENST00000297439 NACADO15069 1562 aa11.3□□□□□ -0.6
DEFB1-201ENST00000297439 DCAF8L2P0C7V8 631 aa11.29□□□□□ -0.6
DEFB1-201ENST00000297439 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.16□□□□□ -0.62
DEFB1-201ENST00000297439 SCRIBQ14160 1630 aa11.16□□□□□ -0.62
DEFB1-201ENST00000297439 NPM3O75607 178 aaKnown RBP11.15□□□□□ -0.62
DEFB1-201ENST00000297439 RSF1Q96T23 1441 aaPredicted RBP11.11□□□□□ -0.63
DEFB1-201ENST00000297439 RB1CC1Q8TDY2 1594 aa11.07□□□□□ -0.64
DEFB1-201ENST00000297439 BAZ1AQ9NRL2 1556 aaPredicted RBP10.94□□□□□ -0.66
DEFB1-201ENST00000297439 MROH2BQ7Z745 1585 aa10.91□□□□□ -0.66
DEFB1-201ENST00000297439 CECR2Q9BXF3 1484 aa10.9□□□□□ -0.66
DEFB1-201ENST00000297439 U3KPZ7 1027 aaPredicted RBP10.89□□□□□ -0.67
DEFB1-201ENST00000297439 WIZO95785 1651 aa10.82□□□□□ -0.68
DEFB1-201ENST00000297439 EIF4G1Q04637 1599 aaKnown RBP10.82□□□□□ -0.68
DEFB1-201ENST00000297439 UNC13AQ9UPW8 1703 aa10.81□□□□□ -0.68
DEFB1-201ENST00000297439 SMARCA4P51532 1647 aa10.8□□□□□ -0.68
DEFB1-201ENST00000297439 TOP2AP11388 1531 aaKnown RBP10.8□□□□□ -0.68
DEFB1-201ENST00000297439 KCNA4P22459 653 aa10.8□□□□□ -0.68
DEFB1-201ENST00000297439 CAPN15O75808 1086 aa10.78□□□□□ -0.68
DEFB1-201ENST00000297439 SPINK5Q9NQ38 1064 aaPredicted RBP10.77□□□□□ -0.69
DEFB1-201ENST00000297439 PEG3Q9GZU2 1588 aa10.75□□□□□ -0.69
DEFB1-201ENST00000297439 DSG3P32926 999 aa10.75□□□□□ -0.69
DEFB1-201ENST00000297439 BICRAQ9NZM4 1560 aa10.73□□□□□ -0.69
DEFB1-201ENST00000297439 TRIM41Q8WV44 630 aa10.7□□□□□ -0.7
DEFB1-201ENST00000297439 SLC4A2P04920 1241 aa10.69□□□□□ -0.7
DEFB1-201ENST00000297439 SMARCA2P51531 1590 aa10.69□□□□□ -0.7
DEFB1-201ENST00000297439 HRCP23327 699 aa10.66□□□□□ -0.7
DEFB1-201ENST00000297439 CCDC88BA6NC98 1476 aa10.63□□□□□ -0.71
DEFB1-201ENST00000297439 LOC105371045A0A1W2PR82 267 aa10.63□□□□□ -0.71
DEFB1-201ENST00000297439 APLP2Q06481 763 aa10.62□□□□□ -0.71
DEFB1-201ENST00000297439 EEA1Q15075 1411 aa10.58□□□□□ -0.72
DEFB1-201ENST00000297439 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.58□□□□□ -0.72
DEFB1-201ENST00000297439 HNRNPUL2Q1KMD3 747 aaKnown RBP10.58□□□□□ -0.72
DEFB1-201ENST00000297439 TRIM26Q12899 539 aaPredicted RBP10.57□□□□□ -0.72
DEFB1-201ENST00000297439 TRHP20396 242 aaPredicted RBP10.56□□□□□ -0.72
DEFB1-201ENST00000297439 ZNF219Q9P2Y4 722 aaPredicted RBP10.56□□□□□ -0.72
DEFB1-201ENST00000297439 PCGF6Q9BYE7 350 aa10.54□□□□□ -0.72
DEFB1-201ENST00000297439 ATAD2BQ9ULI0 1458 aa10.53□□□□□ -0.72
DEFB1-201ENST00000297439 POTEHQ6S545 545 aa10.52□□□□□ -0.73
DEFB1-201ENST00000297439 ABCB7O75027 752 aa10.5□□□□□ -0.73
DEFB1-201ENST00000297439 SAMD1Q6SPF0 538 aaPredicted RBP10.5□□□□□ -0.73
DEFB1-201ENST00000297439 ABCC8Q09428 1581 aa10.48□□□□□ -0.73
DEFB1-201ENST00000297439 WRNQ14191 1432 aaPredicted RBP eCLIP10.47□□□□□ -0.73
DEFB1-201ENST00000297439 BAZ1BQ9UIG0 1483 aaKnown RBP10.47□□□□□ -0.73
DEFB1-201ENST00000297439 HMGXB3Q12766 1538 aa10.47□□□□□ -0.73
DEFB1-201ENST00000297439 PABPN1Q86U42 306 aaKnown RBP eCLIP10.43□□□□□ -0.74
DEFB1-201ENST00000297439 NCAPD3P42695 1498 aa10.42□□□□□ -0.74
DEFB1-201ENST00000297439 TNIKQ9UKE5 1360 aa10.42□□□□□ -0.74
DEFB1-201ENST00000297439 ZEB1P37275 1124 aaPredicted RBP10.4□□□□□ -0.74
DEFB1-201ENST00000297439 FAM9AQ8IZU1 332 aaPredicted RBP10.4□□□□□ -0.74
DEFB1-201ENST00000297439 KIF21BO75037 1637 aa10.39□□□□□ -0.75
DEFB1-201ENST00000297439 GOLGA3Q08378 1498 aa10.37□□□□□ -0.75
DEFB1-201ENST00000297439 SYNJ1O43426 1573 aa10.37□□□□□ -0.75
DEFB1-201ENST00000297439 SOGA1O94964 1423 aa10.36□□□□□ -0.75
DEFB1-201ENST00000297439 CEP164Q9UPV0 1460 aa10.36□□□□□ -0.75
DEFB1-201ENST00000297439 CEP162Q5TB80 1403 aa10.35□□□□□ -0.75
DEFB1-201ENST00000297439 CSRNP3Q8WYN3 585 aa10.35□□□□□ -0.75
DEFB1-201ENST00000297439 TOP2BQ02880 1626 aa10.35□□□□□ -0.75
DEFB1-201ENST00000297439 BIVM-ERCC5R4GMW8 1640 aa10.35□□□□□ -0.75
DEFB1-201ENST00000297439 MYCNP04198 464 aaPredicted RBP10.34□□□□□ -0.75
DEFB1-201ENST00000297439 RBM42Q9BTD8 480 aaKnown RBP10.29□□□□□ -0.76
DEFB1-201ENST00000297439 RUSC2Q8N2Y8 1516 aa10.28□□□□□ -0.76
DEFB1-201ENST00000297439 CFTRP13569 1480 aa10.28□□□□□ -0.76
DEFB1-201ENST00000297439 ERICH3Q5RHP9 1530 aa10.27□□□□□ -0.77
DEFB1-201ENST00000297439 PRDM2Q13029 1718 aa10.25□□□□□ -0.77
DEFB1-201ENST00000297439 POLA2Q14181 598 aa10.25□□□□□ -0.77
DEFB1-201ENST00000297439 PRXQ9BXM0 1461 aa10.22□□□□□ -0.77
DEFB1-201ENST00000297439 CUX1P39880 1505 aa10.19□□□□□ -0.78
DEFB1-201ENST00000297439 VPS8Q8N3P4 1428 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms