RNA–Protein interactions for RNA: ENST00000409838.1

SNX10-204, Transcript of sorting nexin 10, humanhuman

TSL 1 (best) BASIC

Gene SNX10, Length 944 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX10-204ENST00000409838 AEBP2Q6ZN18 517 aaPredicted RBP25.3■■□□□ 1.64
SNX10-204ENST00000409838 CHIC1Q5VXU3 224 aa24.41■■□□□ 1.5
SNX10-204ENST00000409838 SENP3Q9H4L4 574 aaPredicted RBP21.49■■□□□ 1.03
SNX10-204ENST00000409838 PHF23Q9BUL5 403 aaPredicted RBP21.46■■□□□ 1.03
SNX10-204ENST00000409838 FOXD1Q16676 465 aa19.99■□□□□ 0.79
SNX10-204ENST00000409838 PLPPR3Q6T4P5 718 aa19.69■□□□□ 0.74
SNX10-204ENST00000409838 PPP6R1Q9UPN7 881 aa19.03■□□□□ 0.64
SNX10-204ENST00000409838 ADRA2BP18089 450 aa18.98■□□□□ 0.63
SNX10-204ENST00000409838 PIAS4Q8N2W9 510 aaPredicted RBP18.77■□□□□ 0.6
SNX10-204ENST00000409838 MSH5O43196 834 aa18.53■□□□□ 0.56
SNX10-204ENST00000409838 POTEDQ86YR6 584 aa17.4■□□□□ 0.38
SNX10-204ENST00000409838 SCAF1Q9H7N4 1312 aaKnown RBP17.34■□□□□ 0.37
SNX10-204ENST00000409838 PPP4R3CPQ6ZMV5 832 aa17.32■□□□□ 0.36
SNX10-204ENST00000409838 MAPK8IP2Q13387 824 aaPredicted RBP17.31■□□□□ 0.36
SNX10-204ENST00000409838 DMRT2Q9Y5R5 561 aa17.11■□□□□ 0.33
SNX10-204ENST00000409838 CNKSR2Q8WXI2 1034 aa16.89■□□□□ 0.29
SNX10-204ENST00000409838 NCBP3Q53F19 620 aaKnown RBP16.76■□□□□ 0.27
SNX10-204ENST00000409838 HOXD11P31277 338 aaPredicted RBP16.65■□□□□ 0.26
SNX10-204ENST00000409838 RNF216Q9NWF9 866 aaPredicted RBP16.64■□□□□ 0.25
SNX10-204ENST00000409838 KCNA4P22459 653 aa16.6■□□□□ 0.25
SNX10-204ENST00000409838 NPM3O75607 178 aaKnown RBP16.55■□□□□ 0.24
SNX10-204ENST00000409838 DCAF8L1A6NGE4 600 aa16.38■□□□□ 0.21
SNX10-204ENST00000409838 DNAJC5BQ9UF47 199 aa16.1■□□□□ 0.17
SNX10-204ENST00000409838 RNF39Q9H2S5 420 aa15.87■□□□□ 0.13
SNX10-204ENST00000409838 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.85■□□□□ 0.132e-6■■□□□ 13.1
SNX10-204ENST00000409838 SLC4A1APQ9BWU0 796 aaKnown RBP15.74■□□□□ 0.11
SNX10-204ENST00000409838 SLC4A2P04920 1241 aa15.7■□□□□ 0.1
SNX10-204ENST00000409838 CACNB1Q02641 598 aaPredicted RBP15.65■□□□□ 0.1
SNX10-204ENST00000409838 C1QBPQ07021 282 aaKnown RBP15.65■□□□□ 0.1
SNX10-204ENST00000409838 U3KPZ7 1027 aaPredicted RBP15.58■□□□□ 0.08
SNX10-204ENST00000409838 FOXD4L1Q9NU39 408 aa15.36■□□□□ 0.05
SNX10-204ENST00000409838 ZBTB22O15209 634 aa15.28■□□□□ 0.04
SNX10-204ENST00000409838 MYCNP04198 464 aaPredicted RBP15.28■□□□□ 0.04
SNX10-204ENST00000409838 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.26■□□□□ 0.03
SNX10-204ENST00000409838 HNRNPUL2Q1KMD3 747 aaKnown RBP15.26■□□□□ 0.03
SNX10-204ENST00000409838 SPINK5Q9NQ38 1064 aaPredicted RBP15.24■□□□□ 0.03
SNX10-204ENST00000409838 SAMD1Q6SPF0 538 aaPredicted RBP15.2■□□□□ 0.02
SNX10-204ENST00000409838 CAPN15O75808 1086 aa15.18■□□□□ 0.02
SNX10-204ENST00000409838 APLP2Q06481 763 aa15.16■□□□□ 0.02
SNX10-204ENST00000409838 TRHP20396 242 aaPredicted RBP15.03■□□□□ -0
SNX10-204ENST00000409838 ZNF219Q9P2Y4 722 aaPredicted RBP15.02■□□□□ -0
SNX10-204ENST00000409838 DSG3P32926 999 aa15□□□□□ -0.01
SNX10-204ENST00000409838 EHMT2Q96KQ7 1210 aa14.98□□□□□ -0.01
SNX10-204ENST00000409838 CSRNP3Q8WYN3 585 aa14.95□□□□□ -0.02
SNX10-204ENST00000409838 ATF5Q9Y2D1 282 aaPredicted RBP14.92□□□□□ -0.02
SNX10-204ENST00000409838 ABCB7O75027 752 aa14.87□□□□□ -0.03
SNX10-204ENST00000409838 ATXN8OSP0DMR3 200 aa14.83□□□□□ -0.04
SNX10-204ENST00000409838 POLA2Q14181 598 aa14.73□□□□□ -0.05
SNX10-204ENST00000409838 ZBTB12Q9Y330 459 aaPredicted RBP14.45□□□□□ -0.1
SNX10-204ENST00000409838 RBM42Q9BTD8 480 aaKnown RBP14.28□□□□□ -0.12
SNX10-204ENST00000409838 FBLN2P98095 1184 aa14.27□□□□□ -0.13
SNX10-204ENST00000409838 MKRN4PQ13434 485 aaPredicted RBP14.25□□□□□ -0.13
SNX10-204ENST00000409838 OSCARQ8IYS5 282 aa14.25□□□□□ -0.13
SNX10-204ENST00000409838 AKT1S1Q96B36 256 aa14.05□□□□□ -0.16
SNX10-204ENST00000409838 SPDYE2BA6NHP3 402 aa14.04□□□□□ -0.16
SNX10-204ENST00000409838 SPDYE6P0CI01 402 aa14.04□□□□□ -0.16
SNX10-204ENST00000409838 SPDYE2Q495Y8 402 aa14.04□□□□□ -0.16
SNX10-204ENST00000409838 ZNF692Q9BU19 519 aaPredicted RBP13.95□□□□□ -0.18
SNX10-204ENST00000409838 REM2Q8IYK8 340 aaPredicted RBP13.92□□□□□ -0.18
SNX10-204ENST00000409838 SSUH2Q9Y2M2 353 aa13.92□□□□□ -0.18
SNX10-204ENST00000409838 CHRDL2Q6WN34 429 aa13.81□□□□□ -0.2
SNX10-204ENST00000409838 PITPNM1O00562 1244 aa13.78□□□□□ -0.2
SNX10-204ENST00000409838 SPDYE4A6NLX3 237 aa13.77□□□□□ -0.21
SNX10-204ENST00000409838 PABPN1Q86U42 306 aaKnown RBP eCLIP13.76□□□□□ -0.21
SNX10-204ENST00000409838 POTEHQ6S545 545 aa13.71□□□□□ -0.21
SNX10-204ENST00000409838 SPDYE1Q8NFV5 336 aaPredicted RBP13.69□□□□□ -0.22
SNX10-204ENST00000409838 CLEC11AQ9Y240 323 aa13.66□□□□□ -0.22
SNX10-204ENST00000409838 PIP4P2Q8N4L2 257 aa13.58□□□□□ -0.24
SNX10-204ENST00000409838 FXR2P51116 673 aaKnown RBP eCLIP13.57□□□□□ -0.24
SNX10-204ENST00000409838 PROM2Q8N271 834 aa13.53□□□□□ -0.24
SNX10-204ENST00000409838 FKBP8Q14318 412 aa13.52□□□□□ -0.25
SNX10-204ENST00000409838 PRR29P0C7W0 189 aa13.49□□□□□ -0.25
SNX10-204ENST00000409838 STAG3Q9UJ98 1225 aa13.46□□□□□ -0.25
SNX10-204ENST00000409838 PRKAR2AP13861 404 aaKnown RBP13.42□□□□□ -0.26
SNX10-204ENST00000409838 CHADLQ6NUI6 762 aa13.37□□□□□ -0.27
SNX10-204ENST00000409838 CREBZFQ9NS37 354 aa13.27□□□□□ -0.29
SNX10-204ENST00000409838 HAX1O00165 279 aa13.21□□□□□ -0.29
SNX10-204ENST00000409838 FARP1Q9Y4F1 1045 aaPredicted RBP13.2□□□□□ -0.3
SNX10-204ENST00000409838 C19orf67A6NJJ6 358 aa13.12□□□□□ -0.31
SNX10-204ENST00000409838 MNX1P50219 401 aaPredicted RBP13.11□□□□□ -0.31
SNX10-204ENST00000409838 FBXO3Q9UK99 471 aa13.11□□□□□ -0.31
SNX10-204ENST00000409838 EVX2Q03828 476 aa13.1□□□□□ -0.31
SNX10-204ENST00000409838 MIER1Q8N108 512 aa13.09□□□□□ -0.31
SNX10-204ENST00000409838 SP7Q8TDD2 431 aaPredicted RBP13.05□□□□□ -0.32
SNX10-204ENST00000409838 PLEKHG5O94827 1062 aa13.03□□□□□ -0.32
SNX10-204ENST00000409838 PLCD3Q8N3E9 789 aa13.03□□□□□ -0.32
SNX10-204ENST00000409838 NPM1P06748 294 aaKnown RBP eCLIP13.02□□□□□ -0.33
SNX10-204ENST00000409838 CD44P16070 742 aaKnown RBP13.02□□□□□ -0.33
SNX10-204ENST00000409838 VASPP50552 380 aaPredicted RBP12.94□□□□□ -0.34
SNX10-204ENST00000409838 ZBTB47Q9UFB7 747 aaPredicted RBP12.91□□□□□ -0.34
SNX10-204ENST00000409838 ZRANB1Q9UGI0 708 aa12.9□□□□□ -0.34
SNX10-204ENST00000409838 PAK3O75914 559 aaPredicted RBP12.86□□□□□ -0.35
SNX10-204ENST00000409838 GABBR2O75899 941 aa12.83□□□□□ -0.36
SNX10-204ENST00000409838 ZNF579Q8NAF0 562 aaKnown RBP12.83□□□□□ -0.36
SNX10-204ENST00000409838 RASEFQ8IZ41 740 aa12.81□□□□□ -0.36
SNX10-204ENST00000409838 TSPYL2Q9H2G4 693 aaPredicted RBP12.81□□□□□ -0.36
SNX10-204ENST00000409838 NUBP1P53384 320 aa12.8□□□□□ -0.36
SNX10-204ENST00000409838 KLHL34Q8N239 644 aa12.78□□□□□ -0.36
SNX10-204ENST00000409838 IFNLR1Q8IU57 520 aaPredicted RBP12.77□□□□□ -0.37
SNX10-204ENST00000409838 CLCN6P51797 869 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms