Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 SZT2-209ENST00000562955 13968 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 RPL23AP1-201ENST00000428990 471 ntBASIC2.19□□□□□ -2.06
MACF1Q9UPN3 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 DUTP1-201ENST00000493631 470 ntBASIC2.19□□□□□ -2.06
MACF1Q9UPN3 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 AL121594.2-201ENST00000541658 472 ntBASIC2.19□□□□□ -2.06
MACF1Q9UPN3 AC126615.2-201ENST00000553003 515 ntBASIC2.19□□□□□ -2.06
MACF1Q9UPN3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 MUC6-201ENST00000421673 8006 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 SELE-204ENST00000367776 3576 ntTSL 5 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 SELE-205ENST00000367777 3576 ntTSL 5 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 AL132765.1-201ENST00000434165 553 ntBASIC2.19□□□□□ -2.06
MACF1Q9UPN3 RPL12P46-201ENST00000436610 195 ntBASIC2.19□□□□□ -2.06
MACF1Q9UPN3 AC005154.2-201ENST00000438110 379 ntBASIC2.19□□□□□ -2.06
MACF1Q9UPN3 CYCSP32-201ENST00000440548 321 ntBASIC2.19□□□□□ -2.06
MACF1Q9UPN3 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 BZW1P1-201ENST00000454901 1240 ntBASIC2.19□□□□□ -2.06
MACF1Q9UPN3 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 RN7SKP276-201ENST00000516242 268 ntBASIC2.19□□□□□ -2.06
MACF1Q9UPN3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 AC010653.1-201ENST00000571108 881 ntBASIC2.19□□□□□ -2.06
MACF1Q9UPN3 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 AC025162.2-201ENST00000619602 560 ntBASIC2.19□□□□□ -2.06
MACF1Q9UPN3 PTPRB-204ENST00000538708 5839 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 AC007485.2-201ENST00000623493 1667 ntBASIC2.19□□□□□ -2.06
MACF1Q9UPN3 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 BTBD9-201ENST00000314100 8486 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 LONRF2-201ENST00000393437 13912 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 OLMALINC-203ENST00000641087 3779 ntBASIC2.19□□□□□ -2.06
MACF1Q9UPN3 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 CASC19-284ENST00000642142 1868 ntBASIC2.19□□□□□ -2.06
MACF1Q9UPN3 RNA5SP428-201ENST00000365129 132 ntBASIC2.19□□□□□ -2.06
MACF1Q9UPN3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 KRR1P1-201ENST00000419430 803 ntBASIC2.19□□□□□ -2.06
MACF1Q9UPN3 AC007559.1-201ENST00000428736 355 ntBASIC2.19□□□□□ -2.06
MACF1Q9UPN3 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 AC074141.1-201ENST00000588129 2995 ntBASIC2.19□□□□□ -2.06
MACF1Q9UPN3 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 AFDN-207ENST00000400822 7593 ntTSL 5 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 AC007996.1-201ENST00000620414 2821 ntBASIC2.19□□□□□ -2.06
MACF1Q9UPN3 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 NACA3P-201ENST00000359690 648 ntBASIC2.19□□□□□ -2.06
MACF1Q9UPN3 MIR133B-201ENST00000362210 119 ntBASIC2.19□□□□□ -2.06
MACF1Q9UPN3 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 TPT1P2-201ENST00000413105 503 ntBASIC2.19□□□□□ -2.06
MACF1Q9UPN3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 LINC00423-201ENST00000421002 903 ntTSL 5 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 AL050321.1-201ENST00000432363 400 ntBASIC2.19□□□□□ -2.06
MACF1Q9UPN3 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 AC140113.4-201ENST00000622087 222 ntBASIC2.19□□□□□ -2.06
MACF1Q9UPN3 AC005332.9-201ENST00000620266 2921 ntBASIC2.19□□□□□ -2.06
MACF1Q9UPN3 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 UGT2B26P-201ENST00000508672 1613 ntBASIC2.19□□□□□ -2.06
MACF1Q9UPN3 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 FAM91A3P-201ENST00000456826 2544 ntBASIC2.19□□□□□ -2.06
MACF1Q9UPN3 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
MACF1Q9UPN3 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms