RNA–Protein interactions for RNA: ENST00000579916.5

CCDC178-208, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC178, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-208ENST00000579916 AEBP2Q6ZN18 517 aaPredicted RBP26.39■■□□□ 1.82
CCDC178-208ENST00000579916 CHIC1Q5VXU3 224 aa24.52■■□□□ 1.52
CCDC178-208ENST00000579916 SENP3Q9H4L4 574 aaPredicted RBP22.46■■□□□ 1.19
CCDC178-208ENST00000579916 PHF23Q9BUL5 403 aaPredicted RBP22.18■■□□□ 1.14
CCDC178-208ENST00000579916 FOXD1Q16676 465 aa21.1■□□□□ 0.97
CCDC178-208ENST00000579916 POTEDQ86YR6 584 aa20.36■□□□□ 0.85
CCDC178-208ENST00000579916 MSH5O43196 834 aa19.82■□□□□ 0.76
CCDC178-208ENST00000579916 PLPPR3Q6T4P5 718 aa19.72■□□□□ 0.75
CCDC178-208ENST00000579916 PIAS4Q8N2W9 510 aaPredicted RBP19.55■□□□□ 0.72
CCDC178-208ENST00000579916 PPP6R1Q9UPN7 881 aa19.39■□□□□ 0.69
CCDC178-208ENST00000579916 ADRA2BP18089 450 aa19.28■□□□□ 0.68
CCDC178-208ENST00000579916 MAPK8IP2Q13387 824 aaPredicted RBP17.9■□□□□ 0.46
CCDC178-208ENST00000579916 DMRT2Q9Y5R5 561 aa17.75■□□□□ 0.43
CCDC178-208ENST00000579916 SCAF1Q9H7N4 1312 aaKnown RBP17.47■□□□□ 0.39
CCDC178-208ENST00000579916 CACNB1Q02641 598 aaPredicted RBP17.41■□□□□ 0.38
CCDC178-208ENST00000579916 PPP4R3CPQ6ZMV5 832 aa17.33■□□□□ 0.36
CCDC178-208ENST00000579916 DCAF8L1A6NGE4 600 aa17.12■□□□□ 0.33
CCDC178-208ENST00000579916 RNF39Q9H2S5 420 aa16.93■□□□□ 0.3
CCDC178-208ENST00000579916 CNKSR2Q8WXI2 1034 aa16.91■□□□□ 0.3
CCDC178-208ENST00000579916 HOXD11P31277 338 aaPredicted RBP16.89■□□□□ 0.29
CCDC178-208ENST00000579916 NCBP3Q53F19 620 aaKnown RBP16.82■□□□□ 0.28
CCDC178-208ENST00000579916 KCNA4P22459 653 aa16.7■□□□□ 0.26
CCDC178-208ENST00000579916 RNF216Q9NWF9 866 aaPredicted RBP16.65■□□□□ 0.26
CCDC178-208ENST00000579916 C1QBPQ07021 282 aaKnown RBP16.6■□□□□ 0.25
CCDC178-208ENST00000579916 NPM3O75607 178 aaKnown RBP16.59■□□□□ 0.25
CCDC178-208ENST00000579916 DNAJC5BQ9UF47 199 aa16.31■□□□□ 0.2
CCDC178-208ENST00000579916 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.12■□□□□ 0.17
CCDC178-208ENST00000579916 SLC4A1APQ9BWU0 796 aaKnown RBP15.86■□□□□ 0.13
CCDC178-208ENST00000579916 POTEHQ6S545 545 aa15.83■□□□□ 0.12
CCDC178-208ENST00000579916 U3KPZ7 1027 aaPredicted RBP15.74■□□□□ 0.11
CCDC178-208ENST00000579916 SLC4A2P04920 1241 aa15.72■□□□□ 0.11
CCDC178-208ENST00000579916 SPINK5Q9NQ38 1064 aaPredicted RBP15.72■□□□□ 0.11
CCDC178-208ENST00000579916 DSG3P32926 999 aa15.7■□□□□ 0.1
CCDC178-208ENST00000579916 CAPN15O75808 1086 aa15.67■□□□□ 0.1
CCDC178-208ENST00000579916 FOXD4L1Q9NU39 408 aa15.46■□□□□ 0.07
CCDC178-208ENST00000579916 ZBTB22O15209 634 aa15.39■□□□□ 0.05
CCDC178-208ENST00000579916 MYCNP04198 464 aaPredicted RBP15.35■□□□□ 0.05
CCDC178-208ENST00000579916 ABCB7O75027 752 aa15.31■□□□□ 0.04
CCDC178-208ENST00000579916 TRHP20396 242 aaPredicted RBP15.31■□□□□ 0.04
CCDC178-208ENST00000579916 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.29■□□□□ 0.04
CCDC178-208ENST00000579916 HNRNPUL2Q1KMD3 747 aaKnown RBP15.29■□□□□ 0.04
CCDC178-208ENST00000579916 SAMD1Q6SPF0 538 aaPredicted RBP15.23■□□□□ 0.03
CCDC178-208ENST00000579916 APLP2Q06481 763 aa15.18■□□□□ 0.02
CCDC178-208ENST00000579916 ZNF219Q9P2Y4 722 aaPredicted RBP15.15■□□□□ 0.02
CCDC178-208ENST00000579916 CSRNP3Q8WYN3 585 aa15.14■□□□□ 0.01
CCDC178-208ENST00000579916 EHMT2Q96KQ7 1210 aa15.12■□□□□ 0.01
CCDC178-208ENST00000579916 ATXN8OSP0DMR3 200 aa14.98□□□□□ -0.01
CCDC178-208ENST00000579916 ATF5Q9Y2D1 282 aaPredicted RBP14.91□□□□□ -0.02
CCDC178-208ENST00000579916 RBM42Q9BTD8 480 aaKnown RBP14.88□□□□□ -0.03
CCDC178-208ENST00000579916 CHRDL2Q6WN34 429 aa14.86□□□□□ -0.03
CCDC178-208ENST00000579916 POLA2Q14181 598 aa14.78□□□□□ -0.04
CCDC178-208ENST00000579916 SP7Q8TDD2 431 aaPredicted RBP14.57□□□□□ -0.08
CCDC178-208ENST00000579916 AKT1S1Q96B36 256 aa14.47□□□□□ -0.09
CCDC178-208ENST00000579916 ZBTB12Q9Y330 459 aaPredicted RBP14.47□□□□□ -0.09
CCDC178-208ENST00000579916 PIP4P2Q8N4L2 257 aa14.42□□□□□ -0.1
CCDC178-208ENST00000579916 REM2Q8IYK8 340 aaPredicted RBP14.4□□□□□ -0.1
CCDC178-208ENST00000579916 OSCARQ8IYS5 282 aa14.32□□□□□ -0.12
CCDC178-208ENST00000579916 HAX1O00165 279 aa14.3□□□□□ -0.12
CCDC178-208ENST00000579916 FBLN2P98095 1184 aa14.29□□□□□ -0.12
CCDC178-208ENST00000579916 MKRN4PQ13434 485 aaPredicted RBP14.29□□□□□ -0.12
CCDC178-208ENST00000579916 PITPNM1O00562 1244 aa14.26□□□□□ -0.13
CCDC178-208ENST00000579916 FXR2P51116 673 aaKnown RBP eCLIP14.22□□□□□ -0.13
CCDC178-208ENST00000579916 EVX2Q03828 476 aa14.17□□□□□ -0.14
CCDC178-208ENST00000579916 SPDYE2BA6NHP3 402 aa14.07□□□□□ -0.16
CCDC178-208ENST00000579916 SPDYE6P0CI01 402 aa14.07□□□□□ -0.16
CCDC178-208ENST00000579916 SPDYE2Q495Y8 402 aa14.07□□□□□ -0.16
CCDC178-208ENST00000579916 SSUH2Q9Y2M2 353 aa13.96□□□□□ -0.17
CCDC178-208ENST00000579916 ZNF692Q9BU19 519 aaPredicted RBP13.92□□□□□ -0.18
CCDC178-208ENST00000579916 PRKAR2AP13861 404 aaKnown RBP13.88□□□□□ -0.19
CCDC178-208ENST00000579916 CLEC11AQ9Y240 323 aa13.84□□□□□ -0.19
CCDC178-208ENST00000579916 SPDYE4A6NLX3 237 aa13.83□□□□□ -0.2
CCDC178-208ENST00000579916 C19orf67A6NJJ6 358 aa13.78□□□□□ -0.2
CCDC178-208ENST00000579916 SPDYE1Q8NFV5 336 aaPredicted RBP13.75□□□□□ -0.21
CCDC178-208ENST00000579916 GABBR2O75899 941 aa13.74□□□□□ -0.21
CCDC178-208ENST00000579916 PABPN1Q86U42 306 aaKnown RBP eCLIP13.74□□□□□ -0.21
CCDC178-208ENST00000579916 PROM2Q8N271 834 aa13.69□□□□□ -0.22
CCDC178-208ENST00000579916 LHX8Q68G74 356 aa13.68□□□□□ -0.22
CCDC178-208ENST00000579916 CHADLQ6NUI6 762 aa13.67□□□□□ -0.22
CCDC178-208ENST00000579916 FKBP8Q14318 412 aa13.64□□□□□ -0.23
CCDC178-208ENST00000579916 STAG3Q9UJ98 1225 aa13.51□□□□□ -0.25
CCDC178-208ENST00000579916 PRR29P0C7W0 189 aa13.5□□□□□ -0.25
CCDC178-208ENST00000579916 POTEIP0CG38 1075 aa13.49□□□□□ -0.25
CCDC178-208ENST00000579916 CD44P16070 742 aaKnown RBP13.39□□□□□ -0.27
CCDC178-208ENST00000579916 FARP1Q9Y4F1 1045 aaPredicted RBP13.35□□□□□ -0.27
CCDC178-208ENST00000579916 PLSCR2Q9NRY7 297 aa13.28□□□□□ -0.28
CCDC178-208ENST00000579916 CREBZFQ9NS37 354 aa13.27□□□□□ -0.29
CCDC178-208ENST00000579916 FBXO3Q9UK99 471 aa13.25□□□□□ -0.29
CCDC178-208ENST00000579916 DCBLD2Q96PD2 775 aa13.22□□□□□ -0.29
CCDC178-208ENST00000579916 CLCN6P51797 869 aa13.17□□□□□ -0.3
CCDC178-208ENST00000579916 ZRANB1Q9UGI0 708 aa13.15□□□□□ -0.3
CCDC178-208ENST00000579916 MNX1P50219 401 aaPredicted RBP13.14□□□□□ -0.31
CCDC178-208ENST00000579916 ZNF579Q8NAF0 562 aaKnown RBP13.13□□□□□ -0.31
CCDC178-208ENST00000579916 GALR2O43603 387 aaPredicted RBP13.09□□□□□ -0.31
CCDC178-208ENST00000579916 MIER1Q8N108 512 aa13.09□□□□□ -0.31
CCDC178-208ENST00000579916 VASPP50552 380 aaPredicted RBP13.07□□□□□ -0.32
CCDC178-208ENST00000579916 OTUD5Q96G74 571 aa13.07□□□□□ -0.32
CCDC178-208ENST00000579916 POTEB2H3BUK9 544 aa13.06□□□□□ -0.32
CCDC178-208ENST00000579916 PLEKHG5O94827 1062 aa13.06□□□□□ -0.32
CCDC178-208ENST00000579916 PLCD3Q8N3E9 789 aa13.05□□□□□ -0.32
CCDC178-208ENST00000579916 NPM1P06748 294 aaKnown RBP eCLIP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms