RNA–Protein interactions for RNA: ENST00000421002.1

LINC00423-201, long intergenic non-protein coding RNA 423, humanhuman

TSL 5 BASIC

Gene LINC00423, Length 903 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00423-201ENST00000421002 CHIC1Q5VXU3 224 aa23.04■■□□□ 1.28
LINC00423-201ENST00000421002 AEBP2Q6ZN18 517 aaPredicted RBP22.91■■□□□ 1.26
LINC00423-201ENST00000421002 PHF23Q9BUL5 403 aaPredicted RBP20.35■□□□□ 0.85
LINC00423-201ENST00000421002 SENP3Q9H4L4 574 aaPredicted RBP19.31■□□□□ 0.68
LINC00423-201ENST00000421002 PLPPR3Q6T4P5 718 aa19■□□□□ 0.63
LINC00423-201ENST00000421002 NISCHQ9Y2I1 1504 aa18.21■□□□□ 0.51
LINC00423-201ENST00000421002 FOXD1Q16676 465 aa17.85■□□□□ 0.45
LINC00423-201ENST00000421002 ADRA2BP18089 450 aa17.81■□□□□ 0.44
LINC00423-201ENST00000421002 PPP6R1Q9UPN7 881 aa17.73■□□□□ 0.43
LINC00423-201ENST00000421002 KCNA4P22459 653 aa17.24■□□□□ 0.35
LINC00423-201ENST00000421002 PIAS4Q8N2W9 510 aaPredicted RBP17■□□□□ 0.31
LINC00423-201ENST00000421002 EHMT2Q96KQ7 1210 aa16.86■□□□□ 0.29
LINC00423-201ENST00000421002 PPP4R3CPQ6ZMV5 832 aa16.84■□□□□ 0.29
LINC00423-201ENST00000421002 NCBP3Q53F19 620 aaKnown RBP16.59■□□□□ 0.25
LINC00423-201ENST00000421002 SLC4A1APQ9BWU0 796 aaKnown RBP16.54■□□□□ 0.24
LINC00423-201ENST00000421002 NPM3O75607 178 aaKnown RBP16.36■□□□□ 0.21
LINC00423-201ENST00000421002 CSRNP3Q8WYN3 585 aa16.35■□□□□ 0.21
LINC00423-201ENST00000421002 SCAF1Q9H7N4 1312 aaKnown RBP16.21■□□□□ 0.19
LINC00423-201ENST00000421002 CNKSR2Q8WXI2 1034 aa16.21■□□□□ 0.19
LINC00423-201ENST00000421002 MSH5O43196 834 aa16.17■□□□□ 0.18
LINC00423-201ENST00000421002 MAPK8IP2Q13387 824 aaPredicted RBP15.9■□□□□ 0.14
LINC00423-201ENST00000421002 ZBTB22O15209 634 aa15.89■□□□□ 0.13
LINC00423-201ENST00000421002 DNAJC5BQ9UF47 199 aa15.78■□□□□ 0.12
LINC00423-201ENST00000421002 RNF216Q9NWF9 866 aaPredicted RBP15.73■□□□□ 0.11
LINC00423-201ENST00000421002 FOXD4L1Q9NU39 408 aa15.66■□□□□ 0.1
LINC00423-201ENST00000421002 CCDC180Q9P1Z9 1646 aa15.63■□□□□ 0.09
LINC00423-201ENST00000421002 DMRT2Q9Y5R5 561 aa15.53■□□□□ 0.08
LINC00423-201ENST00000421002 HOXD11P31277 338 aaPredicted RBP15.49■□□□□ 0.07
LINC00423-201ENST00000421002 ZCCHC6Q5VYS8 1495 aaKnown RBP15.42■□□□□ 0.06
LINC00423-201ENST00000421002 SLC4A2P04920 1241 aa15.29■□□□□ 0.04
LINC00423-201ENST00000421002 DCAF1Q9Y4B6 1507 aa15.26■□□□□ 0.03
LINC00423-201ENST00000421002 MYCNP04198 464 aaPredicted RBP15.09■□□□□ 0.01
LINC00423-201ENST00000421002 SHROOM4Q9ULL8 1493 aa15.06■□□□□ 0
LINC00423-201ENST00000421002 ATXN8OSP0DMR3 200 aa15.05■□□□□ -0
LINC00423-201ENST00000421002 SUPT5HO00267 1087 aaKnown RBP15.02■□□□□ -0
LINC00423-201ENST00000421002 MYO15BQ96JP2 1530 aa14.85□□□□□ -0.03
LINC00423-201ENST00000421002 DCAF8L1A6NGE4 600 aa14.82□□□□□ -0.04
LINC00423-201ENST00000421002 HRCP23327 699 aa14.78□□□□□ -0.04
LINC00423-201ENST00000421002 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.75□□□□□ -0.05
LINC00423-201ENST00000421002 FKBP8Q14318 412 aa14.73□□□□□ -0.05
LINC00423-201ENST00000421002 ATF5Q9Y2D1 282 aaPredicted RBP14.66□□□□□ -0.06
LINC00423-201ENST00000421002 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.63□□□□□ -0.07
LINC00423-201ENST00000421002 DCAF8L2P0C7V8 631 aa14.63□□□□□ -0.07
LINC00423-201ENST00000421002 HNRNPUL2Q1KMD3 747 aaKnown RBP14.63□□□□□ -0.07
LINC00423-201ENST00000421002 AMER1Q5JTC6 1135 aaPredicted RBP14.63□□□□□ -0.07
LINC00423-201ENST00000421002 RTN4Q9NQC3 1192 aaKnown RBP14.63□□□□□ -0.07
LINC00423-201ENST00000421002 SAMD1Q6SPF0 538 aaPredicted RBP14.62□□□□□ -0.07
LINC00423-201ENST00000421002 U3KPZ7 1027 aaPredicted RBP14.6□□□□□ -0.07
LINC00423-201ENST00000421002 ZEB1P37275 1124 aaPredicted RBP14.55□□□□□ -0.08
LINC00423-201ENST00000421002 ABCC9O60706 1549 aa14.55□□□□□ -0.08
LINC00423-201ENST00000421002 TRIM26Q12899 539 aaPredicted RBP14.49□□□□□ -0.09
LINC00423-201ENST00000421002 PCGF6Q9BYE7 350 aa14.45□□□□□ -0.1
LINC00423-201ENST00000421002 NACADO15069 1562 aa14.41□□□□□ -0.1
LINC00423-201ENST00000421002 RB1CC1Q8TDY2 1594 aa14.39□□□□□ -0.11
LINC00423-201ENST00000421002 RSF1Q96T23 1441 aaPredicted RBP14.37□□□□□ -0.11
LINC00423-201ENST00000421002 SLC24A1O60721 1099 aa14.33□□□□□ -0.12
LINC00423-201ENST00000421002 ZNF219Q9P2Y4 722 aaPredicted RBP14.33□□□□□ -0.12
LINC00423-201ENST00000421002 APLP2Q06481 763 aa14.31□□□□□ -0.12
LINC00423-201ENST00000421002 TRIM41Q8WV44 630 aa14.25□□□□□ -0.13
LINC00423-201ENST00000421002 LOC105371045A0A1W2PR82 267 aa14.19□□□□□ -0.14
LINC00423-201ENST00000421002 SCRIBQ14160 1630 aa14.19□□□□□ -0.14
LINC00423-201ENST00000421002 PELP1Q8IZL8 1130 aaKnown RBP14.17□□□□□ -0.14
LINC00423-201ENST00000421002 BAZ1AQ9NRL2 1556 aaPredicted RBP14.07□□□□□ -0.16
LINC00423-201ENST00000421002 SPDYE4A6NLX3 237 aa14.06□□□□□ -0.16
LINC00423-201ENST00000421002 MKRN4PQ13434 485 aaPredicted RBP14.05□□□□□ -0.16
LINC00423-201ENST00000421002 FBXO3Q9UK99 471 aa14.01□□□□□ -0.17
LINC00423-201ENST00000421002 EEA1Q15075 1411 aa13.99□□□□□ -0.17
LINC00423-201ENST00000421002 TRHP20396 242 aaPredicted RBP13.99□□□□□ -0.17
LINC00423-201ENST00000421002 SPINK5Q9NQ38 1064 aaPredicted RBP13.99□□□□□ -0.17
LINC00423-201ENST00000421002 FBLN2P98095 1184 aa13.97□□□□□ -0.17
LINC00423-201ENST00000421002 MROH2BQ7Z745 1585 aa13.96□□□□□ -0.18
LINC00423-201ENST00000421002 RNF39Q9H2S5 420 aa13.95□□□□□ -0.18
LINC00423-201ENST00000421002 PPARGC1BQ86YN6 1023 aaKnown RBP13.94□□□□□ -0.18
LINC00423-201ENST00000421002 POLA2Q14181 598 aa13.93□□□□□ -0.18
LINC00423-201ENST00000421002 PROM2Q8N271 834 aa13.93□□□□□ -0.18
LINC00423-201ENST00000421002 WRNQ14191 1432 aaPredicted RBP eCLIP13.92□□□□□ -0.18
LINC00423-201ENST00000421002 CECR2Q9BXF3 1484 aa13.89□□□□□ -0.19
LINC00423-201ENST00000421002 CAPN15O75808 1086 aa13.89□□□□□ -0.19
LINC00423-201ENST00000421002 TOP2AP11388 1531 aaKnown RBP13.89□□□□□ -0.19
LINC00423-201ENST00000421002 WIZO95785 1651 aa13.87□□□□□ -0.19
LINC00423-201ENST00000421002 EIF4G1Q04637 1599 aaKnown RBP13.84□□□□□ -0.19
LINC00423-201ENST00000421002 VASPP50552 380 aaPredicted RBP13.81□□□□□ -0.2
LINC00423-201ENST00000421002 C1QBPQ07021 282 aaKnown RBP13.81□□□□□ -0.2
LINC00423-201ENST00000421002 TNIKQ9UKE5 1360 aa13.81□□□□□ -0.2
LINC00423-201ENST00000421002 SMARCA4P51532 1647 aa13.79□□□□□ -0.2
LINC00423-201ENST00000421002 FAM9AQ8IZU1 332 aaPredicted RBP13.74□□□□□ -0.21
LINC00423-201ENST00000421002 ZBTB12Q9Y330 459 aaPredicted RBP13.73□□□□□ -0.21
LINC00423-201ENST00000421002 PEG3Q9GZU2 1588 aa13.72□□□□□ -0.21
LINC00423-201ENST00000421002 MYT1Q01538 1121 aa13.72□□□□□ -0.21
LINC00423-201ENST00000421002 CCDC88BA6NC98 1476 aa13.71□□□□□ -0.21
LINC00423-201ENST00000421002 SMARCA2P51531 1590 aa13.71□□□□□ -0.22
LINC00423-201ENST00000421002 ABCB7O75027 752 aa13.7□□□□□ -0.22
LINC00423-201ENST00000421002 CENPBP07199 599 aaPredicted RBP13.7□□□□□ -0.22
LINC00423-201ENST00000421002 CCER1Q8TC90 406 aaPredicted RBP13.69□□□□□ -0.22
LINC00423-201ENST00000421002 IFNLR1Q8IU57 520 aaPredicted RBP13.68□□□□□ -0.22
LINC00423-201ENST00000421002 GOLGA3Q08378 1498 aa13.65□□□□□ -0.22
LINC00423-201ENST00000421002 CEP162Q5TB80 1403 aa13.64□□□□□ -0.23
LINC00423-201ENST00000421002 BAZ1BQ9UIG0 1483 aaKnown RBP13.6□□□□□ -0.23
LINC00423-201ENST00000421002 CEP164Q9UPV0 1460 aa13.6□□□□□ -0.23
LINC00423-201ENST00000421002 UNC13AQ9UPW8 1703 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms