Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.27□□□□□ -1.41
SHISA3A0PJX4 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 AC242426.1-201ENST00000435270 960 ntBASIC6.27□□□□□ -1.41
SHISA3A0PJX4 AC093716.1-201ENST00000435923 377 ntBASIC6.27□□□□□ -1.41
SHISA3A0PJX4 MRPL22-202ENST00000439747 784 ntTSL 2 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 DNAJC19P4-201ENST00000440115 345 ntBASIC6.27□□□□□ -1.41
SHISA3A0PJX4 PRELID1P3-201ENST00000450055 643 ntBASIC6.27□□□□□ -1.41
SHISA3A0PJX4 C15orf40-202ENST00000451195 518 ntTSL 3 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 RANP1-206ENST00000455094 651 ntBASIC6.27□□□□□ -1.41
SHISA3A0PJX4 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 RN7SL12P-201ENST00000473849 290 ntBASIC6.27□□□□□ -1.41
SHISA3A0PJX4 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 RN7SL505P-201ENST00000482644 293 ntBASIC6.27□□□□□ -1.41
SHISA3A0PJX4 ALG13-214ENST00000482742 620 ntTSL 2 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 RN7SL862P-201ENST00000491550 298 ntBASIC6.27□□□□□ -1.41
SHISA3A0PJX4 OSTC-204ENST00000512478 663 ntTSL 5 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 SETP21-201ENST00000514799 892 ntBASIC6.27□□□□□ -1.41
SHISA3A0PJX4 CA1-215ENST00000522389 551 ntTSL 3 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 OR7K1P-201ENST00000546439 926 ntBASIC6.27□□□□□ -1.41
SHISA3A0PJX4 AL132712.1-201ENST00000555967 582 ntTSL 4 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 LINC00556-201ENST00000569603 412 ntBASIC6.27□□□□□ -1.41
SHISA3A0PJX4 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 AC011453.2-201ENST00000603737 729 ntBASIC6.27□□□□□ -1.41
SHISA3A0PJX4 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 AL159169.3-201ENST00000608871 561 ntBASIC6.27□□□□□ -1.41
SHISA3A0PJX4 AC097381.3-201ENST00000608962 462 ntBASIC6.27□□□□□ -1.41
SHISA3A0PJX4 AL022238.3-201ENST00000609279 443 ntBASIC6.27□□□□□ -1.41
SHISA3A0PJX4 AC103974.2-201ENST00000611319 778 ntBASIC6.27□□□□□ -1.41
SHISA3A0PJX4 LINC01739-205ENST00000641890 573 ntBASIC6.27□□□□□ -1.41
SHISA3A0PJX4 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 AC109315.1-201ENST00000584143 1347 ntBASIC6.26□□□□□ -1.41
SHISA3A0PJX4 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 AL391380.1-201ENST00000439300 1432 ntBASIC6.26□□□□□ -1.41
SHISA3A0PJX4 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 RNA5SP71-201ENST00000362967 126 ntBASIC6.26□□□□□ -1.41
SHISA3A0PJX4 ATF3-204ENST00000366983 858 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 LEMD1-202ENST00000367151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 LEMD1-204ENST00000367153 929 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 FAM204BP-201ENST00000369171 701 ntBASIC6.26□□□□□ -1.41
SHISA3A0PJX4 GZMB-203ENST00000382542 666 ntTSL 2 BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 Y_RNA.390-201ENST00000383932 102 ntBASIC6.26□□□□□ -1.41
SHISA3A0PJX4 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 LEMD1-206ENST00000391936 727 ntTSL 5 BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 RPL9P21-201ENST00000392269 505 ntBASIC6.26□□□□□ -1.41
SHISA3A0PJX4 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.26□□□□□ -1.41
SHISA3A0PJX4 RN7SKP59-201ENST00000410520 314 ntBASIC6.26□□□□□ -1.41
SHISA3A0PJX4 AC009413.1-201ENST00000414823 399 ntBASIC6.26□□□□□ -1.41
SHISA3A0PJX4 AL358452.1-201ENST00000414995 800 ntTSL 3 BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 ATG4AP1-201ENST00000416893 538 ntBASIC6.26□□□□□ -1.41
SHISA3A0PJX4 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 HMGN1P32-201ENST00000441744 256 ntBASIC6.26□□□□□ -1.41
SHISA3A0PJX4 FUNDC2P2-202ENST00000443452 493 ntBASIC6.26□□□□□ -1.41
SHISA3A0PJX4 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 OR9M1P-201ENST00000459641 921 ntBASIC6.26□□□□□ -1.41
SHISA3A0PJX4 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC6.26□□□□□ -1.41
SHISA3A0PJX4 HMGB1P36-201ENST00000487709 576 ntBASIC6.26□□□□□ -1.41
SHISA3A0PJX4 AC105391.1-201ENST00000503155 1045 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms