RNA–Protein interactions for RNA: ENST00000536518.1

LINC02443-201, Transcript of long intergenic non-protein coding RNA 2443, humanhuman

TSL 1 (best) BASIC

Gene LINC02443, Length 585 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02443-201ENST00000536518 AEBP2Q6ZN18 517 aaPredicted RBP21.95■■□□□ 1.1
LINC02443-201ENST00000536518 CHIC1Q5VXU3 224 aa20.87■□□□□ 0.93
LINC02443-201ENST00000536518 SENP3Q9H4L4 574 aaPredicted RBP18.79■□□□□ 0.6
LINC02443-201ENST00000536518 PHF23Q9BUL5 403 aaPredicted RBP18.52■□□□□ 0.56
LINC02443-201ENST00000536518 NISCHQ9Y2I1 1504 aa18.49■□□□□ 0.55
LINC02443-201ENST00000536518 FOXD1Q16676 465 aa17.47■□□□□ 0.39
LINC02443-201ENST00000536518 PLPPR3Q6T4P5 718 aa16.7■□□□□ 0.26
LINC02443-201ENST00000536518 CCDC180Q9P1Z9 1646 aa16.44■□□□□ 0.22
LINC02443-201ENST00000536518 MSH5O43196 834 aa16.4■□□□□ 0.22
LINC02443-201ENST00000536518 PIAS4Q8N2W9 510 aaPredicted RBP16.35■□□□□ 0.21
LINC02443-201ENST00000536518 PPP6R1Q9UPN7 881 aa16.32■□□□□ 0.2
LINC02443-201ENST00000536518 ADRA2BP18089 450 aa16.28■□□□□ 0.2
LINC02443-201ENST00000536518 ABCC9O60706 1549 aa16.01■□□□□ 0.15
LINC02443-201ENST00000536518 POTEDQ86YR6 584 aa15.98■□□□□ 0.15
LINC02443-201ENST00000536518 DCAF8L2P0C7V8 631 aa15.49■□□□□ 0.07
LINC02443-201ENST00000536518 RB1CC1Q8TDY2 1594 aa15.46■□□□□ 0.07
LINC02443-201ENST00000536518 NACADO15069 1562 aa15.45■□□□□ 0.06
LINC02443-201ENST00000536518 ZCCHC6Q5VYS8 1495 aaKnown RBP15.4■□□□□ 0.06
LINC02443-201ENST00000536518 MYO15BQ96JP2 1530 aa15.37■□□□□ 0.05
LINC02443-201ENST00000536518 DCAF1Q9Y4B6 1507 aa15.32■□□□□ 0.04
LINC02443-201ENST00000536518 UNC13AQ9UPW8 1703 aa15.05■□□□□ -0
LINC02443-201ENST00000536518 SCRIBQ14160 1630 aa14.99□□□□□ -0.01
LINC02443-201ENST00000536518 PABPN1Q86U42 306 aaKnown RBP eCLIP14.97□□□□□ -0.01
LINC02443-201ENST00000536518 SCAF1Q9H7N4 1312 aaKnown RBP14.95□□□□□ -0.02
LINC02443-201ENST00000536518 MAPK8IP2Q13387 824 aaPredicted RBP14.94□□□□□ -0.02
LINC02443-201ENST00000536518 BICRAQ9NZM4 1560 aa14.92□□□□□ -0.02
LINC02443-201ENST00000536518 DMRT2Q9Y5R5 561 aa14.88□□□□□ -0.03
LINC02443-201ENST00000536518 SHROOM4Q9ULL8 1493 aa14.85□□□□□ -0.03
LINC02443-201ENST00000536518 PPP4R3CPQ6ZMV5 832 aa14.62□□□□□ -0.07
LINC02443-201ENST00000536518 DNAJC5BQ9UF47 199 aa14.58□□□□□ -0.08
LINC02443-201ENST00000536518 EIF4G1Q04637 1599 aaKnown RBP14.56□□□□□ -0.08
LINC02443-201ENST00000536518 CC2D2AQ9P2K1 1620 aa14.48□□□□□ -0.09
LINC02443-201ENST00000536518 CECR2Q9BXF3 1484 aa14.39□□□□□ -0.11
LINC02443-201ENST00000536518 BAZ1AQ9NRL2 1556 aaPredicted RBP14.36□□□□□ -0.11
LINC02443-201ENST00000536518 CNKSR2Q8WXI2 1034 aa14.36□□□□□ -0.11
LINC02443-201ENST00000536518 SMARCA4P51532 1647 aa14.33□□□□□ -0.11
LINC02443-201ENST00000536518 HOXD11P31277 338 aaPredicted RBP14.32□□□□□ -0.12
LINC02443-201ENST00000536518 DCAF8L1A6NGE4 600 aa14.29□□□□□ -0.12
LINC02443-201ENST00000536518 KCNA4P22459 653 aa14.29□□□□□ -0.12
LINC02443-201ENST00000536518 SMARCA2P51531 1590 aa14.27□□□□□ -0.12
LINC02443-201ENST00000536518 NCAPD3P42695 1498 aa14.24□□□□□ -0.13
LINC02443-201ENST00000536518 ATAD2BQ9ULI0 1458 aa14.24□□□□□ -0.13
LINC02443-201ENST00000536518 MROH2BQ7Z745 1585 aa14.23□□□□□ -0.13
LINC02443-201ENST00000536518 RNF216Q9NWF9 866 aaPredicted RBP14.23□□□□□ -0.13
LINC02443-201ENST00000536518 PEG3Q9GZU2 1588 aa14.2□□□□□ -0.14
LINC02443-201ENST00000536518 HMGXB3Q12766 1538 aa14.18□□□□□ -0.14
LINC02443-201ENST00000536518 BAZ1BQ9UIG0 1483 aaKnown RBP14.17□□□□□ -0.14
LINC02443-201ENST00000536518 RSF1Q96T23 1441 aaPredicted RBP14.1□□□□□ -0.15
LINC02443-201ENST00000536518 NCBP3Q53F19 620 aaKnown RBP14.1□□□□□ -0.15
LINC02443-201ENST00000536518 WIZO95785 1651 aa14.09□□□□□ -0.15
LINC02443-201ENST00000536518 CACNB1Q02641 598 aaPredicted RBP14.07□□□□□ -0.16
LINC02443-201ENST00000536518 RNF39Q9H2S5 420 aa13.97□□□□□ -0.17
LINC02443-201ENST00000536518 TOP2AP11388 1531 aaKnown RBP13.96□□□□□ -0.17
LINC02443-201ENST00000536518 LAMC3Q9Y6N6 1575 aa13.88□□□□□ -0.19
LINC02443-201ENST00000536518 NPM3O75607 178 aaKnown RBP13.86□□□□□ -0.19
LINC02443-201ENST00000536518 ERCC6Q03468 1493 aa13.86□□□□□ -0.19
LINC02443-201ENST00000536518 NESP48681 1621 aa13.85□□□□□ -0.19
LINC02443-201ENST00000536518 CADPSQ9ULU8 1353 aa13.83□□□□□ -0.19
LINC02443-201ENST00000536518 SUPT5HO00267 1087 aaKnown RBP13.83□□□□□ -0.2
LINC02443-201ENST00000536518 PDS5BQ9NTI5 1447 aa13.81□□□□□ -0.2
LINC02443-201ENST00000536518 C1QBPQ07021 282 aaKnown RBP13.79□□□□□ -0.2
LINC02443-201ENST00000536518 CCDC88BA6NC98 1476 aa13.78□□□□□ -0.2
LINC02443-201ENST00000536518 CFTRP13569 1480 aa13.75□□□□□ -0.21
LINC02443-201ENST00000536518 KIF21AQ7Z4S6 1674 aa13.7□□□□□ -0.22
LINC02443-201ENST00000536518 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.68□□□□□ -0.22
LINC02443-201ENST00000536518 FANCD2Q9BXW9 1451 aa13.67□□□□□ -0.22
LINC02443-201ENST00000536518 CEP164Q9UPV0 1460 aa13.67□□□□□ -0.22
LINC02443-201ENST00000536518 PRDM2Q13029 1718 aa13.67□□□□□ -0.22
LINC02443-201ENST00000536518 CUX2O14529 1486 aa13.67□□□□□ -0.22
LINC02443-201ENST00000536518 THOC2Q8NI27 1593 aaKnown RBP13.63□□□□□ -0.23
LINC02443-201ENST00000536518 MRC2Q9UBG0 1479 aa13.62□□□□□ -0.23
LINC02443-201ENST00000536518 SLC4A1APQ9BWU0 796 aaKnown RBP13.62□□□□□ -0.23
LINC02443-201ENST00000536518 WDR62O43379 1518 aa13.56□□□□□ -0.24
LINC02443-201ENST00000536518 ABCC8Q09428 1581 aa13.51□□□□□ -0.25
LINC02443-201ENST00000536518 URB2Q14146 1524 aaKnown RBP13.5□□□□□ -0.25
LINC02443-201ENST00000536518 EHMT2Q96KQ7 1210 aa13.47□□□□□ -0.25
LINC02443-201ENST00000536518 DNMBPQ6XZF7 1577 aa13.45□□□□□ -0.26
LINC02443-201ENST00000536518 TOPBP1Q92547 1522 aa13.45□□□□□ -0.26
LINC02443-201ENST00000536518 IFT140Q96RY7 1462 aa13.38□□□□□ -0.27
LINC02443-201ENST00000536518 CUX1P39880 1505 aa13.35□□□□□ -0.27
LINC02443-201ENST00000536518 U3KPZ7 1027 aaPredicted RBP13.35□□□□□ -0.27
LINC02443-201ENST00000536518 POLA1P09884 1462 aaPredicted RBP13.34□□□□□ -0.27
LINC02443-201ENST00000536518 WRNQ14191 1432 aaPredicted RBP eCLIP13.33□□□□□ -0.28
LINC02443-201ENST00000536518 FGD5Q6ZNL6 1462 aa13.32□□□□□ -0.28
LINC02443-201ENST00000536518 SOGA1O94964 1423 aa13.31□□□□□ -0.28
LINC02443-201ENST00000536518 TARBP1Q13395 1621 aaKnown RBP13.28□□□□□ -0.28
LINC02443-201ENST00000536518 TOP2BQ02880 1626 aa13.28□□□□□ -0.28
LINC02443-201ENST00000536518 RAD54L2Q9Y4B4 1467 aa13.27□□□□□ -0.29
LINC02443-201ENST00000536518 BIVM-ERCC5R4GMW8 1640 aa13.27□□□□□ -0.29
LINC02443-201ENST00000536518 CSRNP3Q8WYN3 585 aa13.26□□□□□ -0.29
LINC02443-201ENST00000536518 ZNF608Q9ULD9 1512 aaPredicted RBP13.26□□□□□ -0.29
LINC02443-201ENST00000536518 WDR97A6NE52 1622 aa13.24□□□□□ -0.29
LINC02443-201ENST00000536518 SYNJ1O43426 1573 aa13.24□□□□□ -0.29
LINC02443-201ENST00000536518 EIF4G3O43432 1585 aaKnown RBP13.24□□□□□ -0.29
LINC02443-201ENST00000536518 TDRD9Q8NDG6 1382 aaKnown RBP13.21□□□□□ -0.29
LINC02443-201ENST00000536518 SLC4A2P04920 1241 aa13.21□□□□□ -0.29
LINC02443-201ENST00000536518 AQRO60306 1485 aaKnown RBP eCLIP13.21□□□□□ -0.3
LINC02443-201ENST00000536518 ABCA10Q8WWZ4 1543 aa13.19□□□□□ -0.3
LINC02443-201ENST00000536518 ZBTB22O15209 634 aa13.19□□□□□ -0.3
LINC02443-201ENST00000536518 CAPN15O75808 1086 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms