RNA–Protein interactions for RNA: ENST00000435407.1

AC104653.2-201, humanhuman

TSL 3 BASIC

Gene AC104653.2, Length 416 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC104653.2-201ENST00000435407 AEBP2Q6ZN18 517 aaPredicted RBP25.89■■□□□ 1.74
AC104653.2-201ENST00000435407 CHIC1Q5VXU3 224 aa24.55■■□□□ 1.52
AC104653.2-201ENST00000435407 SENP3Q9H4L4 574 aaPredicted RBP22.08■■□□□ 1.13
AC104653.2-201ENST00000435407 PHF23Q9BUL5 403 aaPredicted RBP21.79■■□□□ 1.08
AC104653.2-201ENST00000435407 FOXD1Q16676 465 aa20.58■□□□□ 0.89
AC104653.2-201ENST00000435407 PLPPR3Q6T4P5 718 aa19.6■□□□□ 0.73
AC104653.2-201ENST00000435407 MSH5O43196 834 aa19.27■□□□□ 0.68
AC104653.2-201ENST00000435407 PPP6R1Q9UPN7 881 aa19.23■□□□□ 0.67
AC104653.2-201ENST00000435407 PIAS4Q8N2W9 510 aaPredicted RBP19.21■□□□□ 0.67
AC104653.2-201ENST00000435407 ADRA2BP18089 450 aa19.15■□□□□ 0.66
AC104653.2-201ENST00000435407 POTEDQ86YR6 584 aa18.85■□□□□ 0.61
AC104653.2-201ENST00000435407 MAPK8IP2Q13387 824 aaPredicted RBP17.6■□□□□ 0.41
AC104653.2-201ENST00000435407 SCAF1Q9H7N4 1312 aaKnown RBP17.52■□□□□ 0.4
AC104653.2-201ENST00000435407 DMRT2Q9Y5R5 561 aa17.52■□□□□ 0.4
AC104653.2-201ENST00000435407 PPP4R3CPQ6ZMV5 832 aa17.17■□□□□ 0.34
AC104653.2-201ENST00000435407 HOXD11P31277 338 aaPredicted RBP16.86■□□□□ 0.29
AC104653.2-201ENST00000435407 CNKSR2Q8WXI2 1034 aa16.85■□□□□ 0.29
AC104653.2-201ENST00000435407 DCAF8L1A6NGE4 600 aa16.75■□□□□ 0.27
AC104653.2-201ENST00000435407 RNF216Q9NWF9 866 aaPredicted RBP16.72■□□□□ 0.27
AC104653.2-201ENST00000435407 CACNB1Q02641 598 aaPredicted RBP16.53■□□□□ 0.24
AC104653.2-201ENST00000435407 NCBP3Q53F19 620 aaKnown RBP16.5■□□□□ 0.23
AC104653.2-201ENST00000435407 RNF39Q9H2S5 420 aa16.46■□□□□ 0.23
AC104653.2-201ENST00000435407 DNAJC5BQ9UF47 199 aa16.3■□□□□ 0.2
AC104653.2-201ENST00000435407 NPM3O75607 178 aaKnown RBP16.28■□□□□ 0.2
AC104653.2-201ENST00000435407 C1QBPQ07021 282 aaKnown RBP16.21■□□□□ 0.19
AC104653.2-201ENST00000435407 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.04■□□□□ 0.16
AC104653.2-201ENST00000435407 KCNA4P22459 653 aa15.94■□□□□ 0.14
AC104653.2-201ENST00000435407 U3KPZ7 1027 aaPredicted RBP15.72■□□□□ 0.11
AC104653.2-201ENST00000435407 SLC4A2P04920 1241 aa15.56■□□□□ 0.08
AC104653.2-201ENST00000435407 SPINK5Q9NQ38 1064 aaPredicted RBP15.5■□□□□ 0.07
AC104653.2-201ENST00000435407 CAPN15O75808 1086 aa15.44■□□□□ 0.06
AC104653.2-201ENST00000435407 DSG3P32926 999 aa15.38■□□□□ 0.05
AC104653.2-201ENST00000435407 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.26■□□□□ 0.03
AC104653.2-201ENST00000435407 APLP2Q06481 763 aa15.26■□□□□ 0.03
AC104653.2-201ENST00000435407 HNRNPUL2Q1KMD3 747 aaKnown RBP15.26■□□□□ 0.03
AC104653.2-201ENST00000435407 TRHP20396 242 aaPredicted RBP15.2■□□□□ 0.02
AC104653.2-201ENST00000435407 SAMD1Q6SPF0 538 aaPredicted RBP15.18■□□□□ 0.02
AC104653.2-201ENST00000435407 ZNF219Q9P2Y4 722 aaPredicted RBP15.18■□□□□ 0.02
AC104653.2-201ENST00000435407 ABCB7O75027 752 aa15.09■□□□□ 0.01
AC104653.2-201ENST00000435407 MYCNP04198 464 aaPredicted RBP15.05■□□□□ -0
AC104653.2-201ENST00000435407 SLC4A1APQ9BWU0 796 aaKnown RBP15.03■□□□□ -0
AC104653.2-201ENST00000435407 FOXD4L1Q9NU39 408 aa14.88□□□□□ -0.03
AC104653.2-201ENST00000435407 POLA2Q14181 598 aa14.79□□□□□ -0.04
AC104653.2-201ENST00000435407 POTEHQ6S545 545 aa14.76□□□□□ -0.05
AC104653.2-201ENST00000435407 ATF5Q9Y2D1 282 aaPredicted RBP14.71□□□□□ -0.05
AC104653.2-201ENST00000435407 ZBTB22O15209 634 aa14.68□□□□□ -0.06
AC104653.2-201ENST00000435407 RBM42Q9BTD8 480 aaKnown RBP14.68□□□□□ -0.06
AC104653.2-201ENST00000435407 ZBTB12Q9Y330 459 aaPredicted RBP14.51□□□□□ -0.09
AC104653.2-201ENST00000435407 ATXN8OSP0DMR3 200 aa14.44□□□□□ -0.1
AC104653.2-201ENST00000435407 CHRDL2Q6WN34 429 aa14.37□□□□□ -0.11
AC104653.2-201ENST00000435407 AKT1S1Q96B36 256 aa14.34□□□□□ -0.11
AC104653.2-201ENST00000435407 OSCARQ8IYS5 282 aa14.33□□□□□ -0.12
AC104653.2-201ENST00000435407 REM2Q8IYK8 340 aaPredicted RBP14.21□□□□□ -0.13
AC104653.2-201ENST00000435407 FBLN2P98095 1184 aa14.13□□□□□ -0.15
AC104653.2-201ENST00000435407 PITPNM1O00562 1244 aa14.06□□□□□ -0.16
AC104653.2-201ENST00000435407 SPDYE2BA6NHP3 402 aa14.05□□□□□ -0.16
AC104653.2-201ENST00000435407 SPDYE6P0CI01 402 aa14.05□□□□□ -0.16
AC104653.2-201ENST00000435407 SPDYE2Q495Y8 402 aa14.05□□□□□ -0.16
AC104653.2-201ENST00000435407 MKRN4PQ13434 485 aaPredicted RBP14.04□□□□□ -0.16
AC104653.2-201ENST00000435407 PIP4P2Q8N4L2 257 aa14.02□□□□□ -0.17
AC104653.2-201ENST00000435407 CSRNP3Q8WYN3 585 aa13.96□□□□□ -0.17
AC104653.2-201ENST00000435407 FXR2P51116 673 aaKnown RBP eCLIP13.94□□□□□ -0.18
AC104653.2-201ENST00000435407 SSUH2Q9Y2M2 353 aa13.88□□□□□ -0.19
AC104653.2-201ENST00000435407 ZNF692Q9BU19 519 aaPredicted RBP13.87□□□□□ -0.19
AC104653.2-201ENST00000435407 SP7Q8TDD2 431 aaPredicted RBP13.83□□□□□ -0.2
AC104653.2-201ENST00000435407 SPDYE1Q8NFV5 336 aaPredicted RBP13.81□□□□□ -0.2
AC104653.2-201ENST00000435407 HAX1O00165 279 aa13.76□□□□□ -0.21
AC104653.2-201ENST00000435407 CLEC11AQ9Y240 323 aa13.75□□□□□ -0.21
AC104653.2-201ENST00000435407 EHMT2Q96KQ7 1210 aa13.74□□□□□ -0.21
AC104653.2-201ENST00000435407 PRKAR2AP13861 404 aaKnown RBP13.68□□□□□ -0.22
AC104653.2-201ENST00000435407 PABPN1Q86U42 306 aaKnown RBP eCLIP13.66□□□□□ -0.22
AC104653.2-201ENST00000435407 EVX2Q03828 476 aa13.6□□□□□ -0.23
AC104653.2-201ENST00000435407 PRR29P0C7W0 189 aa13.54□□□□□ -0.24
AC104653.2-201ENST00000435407 CHADLQ6NUI6 762 aa13.51□□□□□ -0.25
AC104653.2-201ENST00000435407 C19orf67A6NJJ6 358 aa13.5□□□□□ -0.25
AC104653.2-201ENST00000435407 SPDYE4A6NLX3 237 aa13.35□□□□□ -0.27
AC104653.2-201ENST00000435407 FARP1Q9Y4F1 1045 aaPredicted RBP13.33□□□□□ -0.28
AC104653.2-201ENST00000435407 GABBR2O75899 941 aa13.3□□□□□ -0.28
AC104653.2-201ENST00000435407 STAG3Q9UJ98 1225 aa13.29□□□□□ -0.28
AC104653.2-201ENST00000435407 CD44P16070 742 aaKnown RBP13.25□□□□□ -0.29
AC104653.2-201ENST00000435407 CREBZFQ9NS37 354 aa13.22□□□□□ -0.29
AC104653.2-201ENST00000435407 CLCN6P51797 869 aa13.09□□□□□ -0.31
AC104653.2-201ENST00000435407 PROM2Q8N271 834 aa13.06□□□□□ -0.32
AC104653.2-201ENST00000435407 ZNF579Q8NAF0 562 aaKnown RBP13.06□□□□□ -0.32
AC104653.2-201ENST00000435407 ZRANB1Q9UGI0 708 aa13.05□□□□□ -0.32
AC104653.2-201ENST00000435407 POTEIP0CG38 1075 aa13.02□□□□□ -0.33
AC104653.2-201ENST00000435407 MNX1P50219 401 aaPredicted RBP13.01□□□□□ -0.33
AC104653.2-201ENST00000435407 LHX8Q68G74 356 aa12.97□□□□□ -0.33
AC104653.2-201ENST00000435407 NPM1P06748 294 aaKnown RBP eCLIP12.96□□□□□ -0.33
AC104653.2-201ENST00000435407 PAK3O75914 559 aaPredicted RBP12.93□□□□□ -0.34
AC104653.2-201ENST00000435407 DCBLD2Q96PD2 775 aa12.91□□□□□ -0.34
AC104653.2-201ENST00000435407 GALR2O43603 387 aaPredicted RBP12.88□□□□□ -0.35
AC104653.2-201ENST00000435407 PHF12Q96QT6 1004 aa12.88□□□□□ -0.35
AC104653.2-201ENST00000435407 MIER1Q8N108 512 aa12.72□□□□□ -0.37
AC104653.2-201ENST00000435407 TSPYL2Q9H2G4 693 aaPredicted RBP12.71□□□□□ -0.37
AC104653.2-201ENST00000435407 PLEKHG5O94827 1062 aa12.7□□□□□ -0.38
AC104653.2-201ENST00000435407 MS4A3Q96HJ5 214 aa12.7□□□□□ -0.38
AC104653.2-201ENST00000435407 CCDC61Q9Y6R9 512 aa12.69□□□□□ -0.38
AC104653.2-201ENST00000435407 PELP1Q8IZL8 1130 aaKnown RBP12.65□□□□□ -0.38
AC104653.2-201ENST00000435407 FKBP8Q14318 412 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms