RNA–Protein interactions for RNA: ENST00000420522.1

LINC01646-201, Transcript of long intergenic non-protein coding RNA 1646, humanhuman

TSL 3 BASIC

Gene LINC01646, Length 682 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01646-201ENST00000420522 AEBP2Q6ZN18 517 aaPredicted RBP19.56■□□□□ 0.72
LINC01646-201ENST00000420522 CHIC1Q5VXU3 224 aa19.42■□□□□ 0.7
LINC01646-201ENST00000420522 PHF23Q9BUL5 403 aaPredicted RBP17.13■□□□□ 0.33
LINC01646-201ENST00000420522 SENP3Q9H4L4 574 aaPredicted RBP16.53■□□□□ 0.24
LINC01646-201ENST00000420522 PLPPR3Q6T4P5 718 aa15.92■□□□□ 0.14
LINC01646-201ENST00000420522 FOXD1Q16676 465 aa15.31■□□□□ 0.04
LINC01646-201ENST00000420522 PPP6R1Q9UPN7 881 aa15.01□□□□□ -0.01
LINC01646-201ENST00000420522 ADRA2BP18089 450 aa15□□□□□ -0.01
LINC01646-201ENST00000420522 PIAS4Q8N2W9 510 aaPredicted RBP14.49□□□□□ -0.09
LINC01646-201ENST00000420522 KCNA4P22459 653 aa14.13□□□□□ -0.15
LINC01646-201ENST00000420522 PPP4R3CPQ6ZMV5 832 aa14.07□□□□□ -0.16
LINC01646-201ENST00000420522 MSH5O43196 834 aa13.97□□□□□ -0.17
LINC01646-201ENST00000420522 NCBP3Q53F19 620 aaKnown RBP13.8□□□□□ -0.2
LINC01646-201ENST00000420522 SCAF1Q9H7N4 1312 aaKnown RBP13.72□□□□□ -0.21
LINC01646-201ENST00000420522 NPM3O75607 178 aaKnown RBP13.6□□□□□ -0.23
LINC01646-201ENST00000420522 CNKSR2Q8WXI2 1034 aa13.6□□□□□ -0.23
LINC01646-201ENST00000420522 SLC4A1APQ9BWU0 796 aaKnown RBP13.51□□□□□ -0.25
LINC01646-201ENST00000420522 MAPK8IP2Q13387 824 aaPredicted RBP13.5□□□□□ -0.25
LINC01646-201ENST00000420522 EHMT2Q96KQ7 1210 aa13.49□□□□□ -0.25
LINC01646-201ENST00000420522 RNF216Q9NWF9 866 aaPredicted RBP13.26□□□□□ -0.29
LINC01646-201ENST00000420522 DMRT2Q9Y5R5 561 aa13.26□□□□□ -0.29
LINC01646-201ENST00000420522 CSRNP3Q8WYN3 585 aa13.22□□□□□ -0.29
LINC01646-201ENST00000420522 DNAJC5BQ9UF47 199 aa13.21□□□□□ -0.29
LINC01646-201ENST00000420522 HOXD11P31277 338 aaPredicted RBP13.12□□□□□ -0.31
LINC01646-201ENST00000420522 ZBTB22O15209 634 aa13.02□□□□□ -0.33
LINC01646-201ENST00000420522 FOXD4L1Q9NU39 408 aa12.9□□□□□ -0.34
LINC01646-201ENST00000420522 SLC4A2P04920 1241 aa12.77□□□□□ -0.37
LINC01646-201ENST00000420522 DCAF8L1A6NGE4 600 aa12.61□□□□□ -0.39
LINC01646-201ENST00000420522 MYCNP04198 464 aaPredicted RBP12.55□□□□□ -0.4
LINC01646-201ENST00000420522 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.48□□□□□ -0.41
LINC01646-201ENST00000420522 ATXN8OSP0DMR3 200 aa12.45□□□□□ -0.42
LINC01646-201ENST00000420522 POTEDQ86YR6 584 aa12.37□□□□□ -0.43
LINC01646-201ENST00000420522 U3KPZ7 1027 aaPredicted RBP12.32□□□□□ -0.44
LINC01646-201ENST00000420522 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.28□□□□□ -0.44
LINC01646-201ENST00000420522 HNRNPUL2Q1KMD3 747 aaKnown RBP12.28□□□□□ -0.44
LINC01646-201ENST00000420522 SAMD1Q6SPF0 538 aaPredicted RBP12.26□□□□□ -0.45
LINC01646-201ENST00000420522 ATF5Q9Y2D1 282 aaPredicted RBP12.21□□□□□ -0.45
LINC01646-201ENST00000420522 APLP2Q06481 763 aa12.07□□□□□ -0.48
LINC01646-201ENST00000420522 RNF39Q9H2S5 420 aa12.02□□□□□ -0.49
LINC01646-201ENST00000420522 ZNF219Q9P2Y4 722 aaPredicted RBP11.98□□□□□ -0.49
LINC01646-201ENST00000420522 FKBP8Q14318 412 aa11.9□□□□□ -0.5
LINC01646-201ENST00000420522 C1QBPQ07021 282 aaKnown RBP11.89□□□□□ -0.51
LINC01646-201ENST00000420522 SPINK5Q9NQ38 1064 aaPredicted RBP11.88□□□□□ -0.51
LINC01646-201ENST00000420522 TRHP20396 242 aaPredicted RBP11.82□□□□□ -0.52
LINC01646-201ENST00000420522 CAPN15O75808 1086 aa11.8□□□□□ -0.52
LINC01646-201ENST00000420522 POLA2Q14181 598 aa11.73□□□□□ -0.53
LINC01646-201ENST00000420522 MKRN4PQ13434 485 aaPredicted RBP11.7□□□□□ -0.54
LINC01646-201ENST00000420522 FBLN2P98095 1184 aa11.65□□□□□ -0.54
LINC01646-201ENST00000420522 ABCB7O75027 752 aa11.6□□□□□ -0.55
LINC01646-201ENST00000420522 SPDYE4A6NLX3 237 aa11.58□□□□□ -0.56
LINC01646-201ENST00000420522 ZBTB12Q9Y330 459 aaPredicted RBP11.57□□□□□ -0.56
LINC01646-201ENST00000420522 DSG3P32926 999 aa11.55□□□□□ -0.56
LINC01646-201ENST00000420522 PROM2Q8N271 834 aa11.48□□□□□ -0.57
LINC01646-201ENST00000420522 AMER1Q5JTC6 1135 aaPredicted RBP11.45□□□□□ -0.58
LINC01646-201ENST00000420522 CACNB1Q02641 598 aaPredicted RBP11.43□□□□□ -0.58
LINC01646-201ENST00000420522 RTN4Q9NQC3 1192 aaKnown RBP11.43□□□□□ -0.58
LINC01646-201ENST00000420522 FBXO3Q9UK99 471 aa11.4□□□□□ -0.58
LINC01646-201ENST00000420522 OSCARQ8IYS5 282 aa11.31□□□□□ -0.6
LINC01646-201ENST00000420522 SPDYE2BA6NHP3 402 aa11.28□□□□□ -0.6
LINC01646-201ENST00000420522 SPDYE6P0CI01 402 aa11.28□□□□□ -0.6
LINC01646-201ENST00000420522 SPDYE2Q495Y8 402 aa11.28□□□□□ -0.6
LINC01646-201ENST00000420522 ZNF692Q9BU19 519 aaPredicted RBP11.28□□□□□ -0.6
LINC01646-201ENST00000420522 SSUH2Q9Y2M2 353 aa11.24□□□□□ -0.61
LINC01646-201ENST00000420522 VASPP50552 380 aaPredicted RBP11.23□□□□□ -0.61
LINC01646-201ENST00000420522 PABPN1Q86U42 306 aaKnown RBP eCLIP11.14□□□□□ -0.63
LINC01646-201ENST00000420522 IFNLR1Q8IU57 520 aaPredicted RBP11.12□□□□□ -0.63
LINC01646-201ENST00000420522 STAG3Q9UJ98 1225 aa11.09□□□□□ -0.63
LINC01646-201ENST00000420522 RBM42Q9BTD8 480 aaKnown RBP10.98□□□□□ -0.65
LINC01646-201ENST00000420522 PLCD3Q8N3E9 789 aa10.95□□□□□ -0.66
LINC01646-201ENST00000420522 KLHL34Q8N239 644 aa10.94□□□□□ -0.66
LINC01646-201ENST00000420522 MIER1Q8N108 512 aa10.93□□□□□ -0.66
LINC01646-201ENST00000420522 AKT1S1Q96B36 256 aa10.93□□□□□ -0.66
LINC01646-201ENST00000420522 SPOCK2Q92563 424 aa10.92□□□□□ -0.66
LINC01646-201ENST00000420522 PKD2Q13563 968 aa10.88□□□□□ -0.67
LINC01646-201ENST00000420522 SLC24A1O60721 1099 aa10.87□□□□□ -0.67
LINC01646-201ENST00000420522 SPDYE1Q8NFV5 336 aaPredicted RBP10.86□□□□□ -0.67
LINC01646-201ENST00000420522 PLEKHG5O94827 1062 aa10.85□□□□□ -0.67
LINC01646-201ENST00000420522 REM2Q8IYK8 340 aaPredicted RBP10.83□□□□□ -0.68
LINC01646-201ENST00000420522 ZBTB47Q9UFB7 747 aaPredicted RBP10.82□□□□□ -0.68
LINC01646-201ENST00000420522 CLEC11AQ9Y240 323 aa10.77□□□□□ -0.69
LINC01646-201ENST00000420522 PRR29P0C7W0 189 aa10.74□□□□□ -0.69
LINC01646-201ENST00000420522 ECM2O94769 699 aaPredicted RBP10.73□□□□□ -0.69
LINC01646-201ENST00000420522 DCAF8L2P0C7V8 631 aa10.7□□□□□ -0.7
LINC01646-201ENST00000420522 CREBZFQ9NS37 354 aa10.7□□□□□ -0.7
LINC01646-201ENST00000420522 PITPNM1O00562 1244 aa10.69□□□□□ -0.7
LINC01646-201ENST00000420522 CIZ1Q9ULV3 898 aaPredicted RBP10.67□□□□□ -0.7
LINC01646-201ENST00000420522 MNX1P50219 401 aaPredicted RBP10.65□□□□□ -0.7
LINC01646-201ENST00000420522 NUBP1P53384 320 aa10.65□□□□□ -0.7
LINC01646-201ENST00000420522 RGL2O15211 777 aa10.62□□□□□ -0.71
LINC01646-201ENST00000420522 TRIM41Q8WV44 630 aa10.61□□□□□ -0.71
LINC01646-201ENST00000420522 GSE1Q14687 1217 aa10.6□□□□□ -0.71
LINC01646-201ENST00000420522 PLCB2Q00722 1185 aa10.59□□□□□ -0.71
LINC01646-201ENST00000420522 NPM1P06748 294 aaKnown RBP eCLIP10.54□□□□□ -0.72
LINC01646-201ENST00000420522 DCAF8Q5TAQ9 597 aa10.54□□□□□ -0.72
LINC01646-201ENST00000420522 FAM212AQ96EL1 285 aa10.53□□□□□ -0.72
LINC01646-201ENST00000420522 BBXQ8WY36 941 aaPredicted RBP10.52□□□□□ -0.73
LINC01646-201ENST00000420522 RASEFQ8IZ41 740 aa10.51□□□□□ -0.73
LINC01646-201ENST00000420522 CHADLQ6NUI6 762 aa10.48□□□□□ -0.73
LINC01646-201ENST00000420522 RNF25Q96BH1 459 aaPredicted RBP10.48□□□□□ -0.73
LINC01646-201ENST00000420522 CHRM1P11229 460 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms