Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 SCARNA20.1-201ENST00000516009 138 ntBASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 RNA5SP473-201ENST00000516402 125 ntBASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 DNM1P31-201ENST00000564149 696 ntBASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 AC010653.1-201ENST00000571108 881 ntBASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 RN7SL66P-201ENST00000582099 264 ntBASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 BNIP3P26-201ENST00000600827 554 ntBASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 AL592295.2-201ENST00000612578 206 ntBASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 AC018816.2-201ENST00000621460 353 ntBASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 ACSL1-211ENST00000515030 3948 ntAPPRIS P3 TSL 5 BASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 OR4G11P-202ENST00000642116 1414 ntBASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 AL391261.1-201ENST00000555712 1479 ntBASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 AC007923.2-201ENST00000584218 1591 ntBASIC8.95□□□□□ -0.98
HPS5Q9UPZ3 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 RPL12P38-202ENST00000588627 2319 ntBASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 CCAT2-201ENST00000630920 1752 ntBASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 RNU6-780P-201ENST00000391030 104 ntBASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 HMGB1P10-201ENST00000395823 563 ntBASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 CALM2P3-201ENST00000400429 449 ntBASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 RPSAP72-201ENST00000407020 358 ntBASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 RPS3AP9-201ENST00000417027 792 ntBASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 FBP2P1-202ENST00000424473 530 ntBASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 AC007742.1-201ENST00000425789 329 ntBASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 TIMM9P3-201ENST00000428659 274 ntBASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 ELOCP26-201ENST00000436067 329 ntBASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 OR6C5P-201ENST00000452388 923 ntBASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 SUMO1P1-201ENST00000497904 306 ntBASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 AC100823.2-201ENST00000518337 699 ntBASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 AC007448.1-201ENST00000582714 234 ntBASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 MIR548AB-201ENST00000584917 84 ntBASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 AL021368.3-201ENST00000607119 578 ntBASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 SLC9B1P1-201ENST00000331172 1337 ntBASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 NEPNP-201ENST00000404786 1371 ntBASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 MTND4P1-201ENST00000457501 1466 ntBASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 MAPK10-354ENST00000641823 2732 ntBASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 ZNF33BP1-201ENST00000452497 1834 ntBASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
HPS5Q9UPZ3 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
HPS5Q9UPZ3 HMSD-201ENST00000408945 2101 ntAPPRIS P1 TSL 3 BASIC8.93□□□□□ -0.98
HPS5Q9UPZ3 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
HPS5Q9UPZ3 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
HPS5Q9UPZ3 AC023818.2-201ENST00000623817 2304 ntBASIC8.93□□□□□ -0.98
HPS5Q9UPZ3 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
HPS5Q9UPZ3 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
HPS5Q9UPZ3 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
HPS5Q9UPZ3 VPS36-201ENST00000378060 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
HPS5Q9UPZ3 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
HPS5Q9UPZ3 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
HPS5Q9UPZ3 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms