RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 CHIC1Q5VXU3 224 aa20.47■□□□□ 0.87
HMGB1P10-201ENST00000395823 AEBP2Q6ZN18 517 aaPredicted RBP20.43■□□□□ 0.86
HMGB1P10-201ENST00000395823 PHF23Q9BUL5 403 aaPredicted RBP18.14■□□□□ 0.49
HMGB1P10-201ENST00000395823 SENP3Q9H4L4 574 aaPredicted RBP17.1■□□□□ 0.33
HMGB1P10-201ENST00000395823 PLPPR3Q6T4P5 718 aa16.82■□□□□ 0.28
HMGB1P10-201ENST00000395823 ADRA2BP18089 450 aa15.88■□□□□ 0.13
HMGB1P10-201ENST00000395823 FOXD1Q16676 465 aa15.88■□□□□ 0.13
HMGB1P10-201ENST00000395823 PPP6R1Q9UPN7 881 aa15.81■□□□□ 0.12
HMGB1P10-201ENST00000395823 KCNA4P22459 653 aa15.35■□□□□ 0.05
HMGB1P10-201ENST00000395823 PIAS4Q8N2W9 510 aaPredicted RBP15.07■□□□□ 0
HMGB1P10-201ENST00000395823 EHMT2Q96KQ7 1210 aa14.97□□□□□ -0.01
HMGB1P10-201ENST00000395823 PPP4R3CPQ6ZMV5 832 aa14.94□□□□□ -0.02
HMGB1P10-201ENST00000395823 SLC4A1APQ9BWU0 796 aaKnown RBP14.66□□□□□ -0.06
HMGB1P10-201ENST00000395823 NCBP3Q53F19 620 aaKnown RBP14.63□□□□□ -0.07
HMGB1P10-201ENST00000395823 CSRNP3Q8WYN3 585 aa14.56□□□□□ -0.08
HMGB1P10-201ENST00000395823 NPM3O75607 178 aaKnown RBP14.54□□□□□ -0.08
HMGB1P10-201ENST00000395823 CNKSR2Q8WXI2 1034 aa14.35□□□□□ -0.11
HMGB1P10-201ENST00000395823 MSH5O43196 834 aa14.29□□□□□ -0.12
HMGB1P10-201ENST00000395823 SCAF1Q9H7N4 1312 aaKnown RBP14.27□□□□□ -0.12
HMGB1P10-201ENST00000395823 ZBTB22O15209 634 aa14.21□□□□□ -0.13
HMGB1P10-201ENST00000395823 MAPK8IP2Q13387 824 aaPredicted RBP14.16□□□□□ -0.14
HMGB1P10-201ENST00000395823 DNAJC5BQ9UF47 199 aa14.03□□□□□ -0.16
HMGB1P10-201ENST00000395823 RNF216Q9NWF9 866 aaPredicted RBP13.94□□□□□ -0.18
HMGB1P10-201ENST00000395823 FOXD4L1Q9NU39 408 aa13.88□□□□□ -0.19
HMGB1P10-201ENST00000395823 DMRT2Q9Y5R5 561 aa13.79□□□□□ -0.2
HMGB1P10-201ENST00000395823 HOXD11P31277 338 aaPredicted RBP13.75□□□□□ -0.21
HMGB1P10-201ENST00000395823 SLC4A2P04920 1241 aa13.63□□□□□ -0.23
HMGB1P10-201ENST00000395823 MYCNP04198 464 aaPredicted RBP13.36□□□□□ -0.27
HMGB1P10-201ENST00000395823 ATXN8OSP0DMR3 200 aa13.31□□□□□ -0.28
HMGB1P10-201ENST00000395823 DCAF8L1A6NGE4 600 aa13.08□□□□□ -0.32
HMGB1P10-201ENST00000395823 ATF5Q9Y2D1 282 aaPredicted RBP13.08□□□□□ -0.32
HMGB1P10-201ENST00000395823 FKBP8Q14318 412 aa13.06□□□□□ -0.32
HMGB1P10-201ENST00000395823 RTN4Q9NQC3 1192 aaKnown RBP13.04□□□□□ -0.32
HMGB1P10-201ENST00000395823 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.03□□□□□ -0.32
HMGB1P10-201ENST00000395823 U3KPZ7 1027 aaPredicted RBP12.99□□□□□ -0.33
HMGB1P10-201ENST00000395823 AMER1Q5JTC6 1135 aaPredicted RBP12.94□□□□□ -0.34
HMGB1P10-201ENST00000395823 SAMD1Q6SPF0 538 aaPredicted RBP12.91□□□□□ -0.34
HMGB1P10-201ENST00000395823 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.87□□□□□ -0.35
HMGB1P10-201ENST00000395823 HNRNPUL2Q1KMD3 747 aaKnown RBP12.87□□□□□ -0.35
HMGB1P10-201ENST00000395823 SLC24A1O60721 1099 aa12.71□□□□□ -0.37
HMGB1P10-201ENST00000395823 ZNF219Q9P2Y4 722 aaPredicted RBP12.71□□□□□ -0.37
HMGB1P10-201ENST00000395823 APLP2Q06481 763 aa12.56□□□□□ -0.4
HMGB1P10-201ENST00000395823 MKRN4PQ13434 485 aaPredicted RBP12.55□□□□□ -0.4
HMGB1P10-201ENST00000395823 SPDYE4A6NLX3 237 aa12.46□□□□□ -0.41
HMGB1P10-201ENST00000395823 SPINK5Q9NQ38 1064 aaPredicted RBP12.45□□□□□ -0.42
HMGB1P10-201ENST00000395823 PROM2Q8N271 834 aa12.42□□□□□ -0.42
HMGB1P10-201ENST00000395823 RNF39Q9H2S5 420 aa12.39□□□□□ -0.43
HMGB1P10-201ENST00000395823 TRHP20396 242 aaPredicted RBP12.38□□□□□ -0.43
HMGB1P10-201ENST00000395823 POLA2Q14181 598 aa12.34□□□□□ -0.43
HMGB1P10-201ENST00000395823 FBXO3Q9UK99 471 aa12.34□□□□□ -0.43
HMGB1P10-201ENST00000395823 FBLN2P98095 1184 aa12.32□□□□□ -0.44
HMGB1P10-201ENST00000395823 CAPN15O75808 1086 aa12.28□□□□□ -0.44
HMGB1P10-201ENST00000395823 VASPP50552 380 aaPredicted RBP12.26□□□□□ -0.45
HMGB1P10-201ENST00000395823 C1QBPQ07021 282 aaKnown RBP12.21□□□□□ -0.45
HMGB1P10-201ENST00000395823 IFNLR1Q8IU57 520 aaPredicted RBP12.17□□□□□ -0.46
HMGB1P10-201ENST00000395823 ABCB7O75027 752 aa12.16□□□□□ -0.46
HMGB1P10-201ENST00000395823 ZBTB12Q9Y330 459 aaPredicted RBP12.11□□□□□ -0.47
HMGB1P10-201ENST00000395823 POTEDQ86YR6 584 aa12.03□□□□□ -0.48
HMGB1P10-201ENST00000395823 PKD2Q13563 968 aa12.01□□□□□ -0.49
HMGB1P10-201ENST00000395823 DSG3P32926 999 aa11.99□□□□□ -0.49
HMGB1P10-201ENST00000395823 PLCB2Q00722 1185 aa11.98□□□□□ -0.49
HMGB1P10-201ENST00000395823 OSCARQ8IYS5 282 aa11.93□□□□□ -0.5
HMGB1P10-201ENST00000395823 SSUH2Q9Y2M2 353 aa11.92□□□□□ -0.5
HMGB1P10-201ENST00000395823 ZNF692Q9BU19 519 aaPredicted RBP11.91□□□□□ -0.5
HMGB1P10-201ENST00000395823 SPDYE2BA6NHP3 402 aa11.88□□□□□ -0.51
HMGB1P10-201ENST00000395823 SPDYE6P0CI01 402 aa11.88□□□□□ -0.51
HMGB1P10-201ENST00000395823 SPDYE2Q495Y8 402 aa11.88□□□□□ -0.51
HMGB1P10-201ENST00000395823 DCAF8L2P0C7V8 631 aa11.87□□□□□ -0.51
HMGB1P10-201ENST00000395823 SPOCK2Q92563 424 aa11.85□□□□□ -0.51
HMGB1P10-201ENST00000395823 STAG3Q9UJ98 1225 aa11.83□□□□□ -0.52
HMGB1P10-201ENST00000395823 PABPN1Q86U42 306 aaKnown RBP eCLIP11.82□□□□□ -0.52
HMGB1P10-201ENST00000395823 KLHL34Q8N239 644 aa11.81□□□□□ -0.52
HMGB1P10-201ENST00000395823 HAP1P54257 671 aaPredicted RBP11.76□□□□□ -0.53
HMGB1P10-201ENST00000395823 ECM2O94769 699 aaPredicted RBP11.74□□□□□ -0.53
HMGB1P10-201ENST00000395823 PLCD3Q8N3E9 789 aa11.74□□□□□ -0.53
HMGB1P10-201ENST00000395823 NPM1P06748 294 aaKnown RBP eCLIP11.72□□□□□ -0.53
HMGB1P10-201ENST00000395823 MIER1Q8N108 512 aa11.7□□□□□ -0.54
HMGB1P10-201ENST00000395823 RGL2O15211 777 aa11.68□□□□□ -0.54
HMGB1P10-201ENST00000395823 BBXQ8WY36 941 aaPredicted RBP11.65□□□□□ -0.54
HMGB1P10-201ENST00000395823 VSIG10Q8N0Z9 540 aa11.6□□□□□ -0.55
HMGB1P10-201ENST00000395823 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.57□□□□□ -0.56
HMGB1P10-201ENST00000395823 PAXIP1Q6ZW49 1069 aaPredicted RBP11.56□□□□□ -0.56
HMGB1P10-201ENST00000395823 KDM2AQ9Y2K7 1162 aa11.56□□□□□ -0.56
HMGB1P10-201ENST00000395823 CACNB1Q02641 598 aaPredicted RBP11.55□□□□□ -0.56
HMGB1P10-201ENST00000395823 CIZ1Q9ULV3 898 aaPredicted RBP11.54□□□□□ -0.56
HMGB1P10-201ENST00000395823 ZBTB47Q9UFB7 747 aaPredicted RBP11.52□□□□□ -0.57
HMGB1P10-201ENST00000395823 CFAP44Q96MT7 982 aa11.51□□□□□ -0.57
HMGB1P10-201ENST00000395823 PLEKHG5O94827 1062 aa11.49□□□□□ -0.57
HMGB1P10-201ENST00000395823 BCANQ96GW7 911 aa11.49□□□□□ -0.57
HMGB1P10-201ENST00000395823 CHGAP10645 457 aaKnown RBP11.46□□□□□ -0.57
HMGB1P10-201ENST00000395823 RNF25Q96BH1 459 aaPredicted RBP11.45□□□□□ -0.58
HMGB1P10-201ENST00000395823 TSHZ2Q9NRE2 1034 aa11.44□□□□□ -0.58
HMGB1P10-201ENST00000395823 NUBP1P53384 320 aa11.43□□□□□ -0.58
HMGB1P10-201ENST00000395823 SPRYD3Q8NCJ5 442 aa11.43□□□□□ -0.58
HMGB1P10-201ENST00000395823 TRIM41Q8WV44 630 aa11.43□□□□□ -0.58
HMGB1P10-201ENST00000395823 PRKCSHP14314 528 aaPredicted RBP11.4□□□□□ -0.58
HMGB1P10-201ENST00000395823 HS6ST3Q8IZP7 471 aa11.39□□□□□ -0.59
HMGB1P10-201ENST00000395823 TAOK2Q9UL54 1235 aa11.38□□□□□ -0.59
HMGB1P10-201ENST00000395823 SPDYE1Q8NFV5 336 aaPredicted RBP11.37□□□□□ -0.59
HMGB1P10-201ENST00000395823 GSE1Q14687 1217 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms