Protein–RNA interactions for Protein: Q9Y661

HS3ST4, Heparan sulfate glucosamine 3-O-sulfotransferase 4, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST4Q9Y661 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.29■□□□□ 0.84
HS3ST4Q9Y661 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HS3ST4Q9Y661 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HS3ST4Q9Y661 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HS3ST4Q9Y661 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HS3ST4Q9Y661 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HS3ST4Q9Y661 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
HS3ST4Q9Y661 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
HS3ST4Q9Y661 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HS3ST4Q9Y661 AC004264.1-201ENST00000608354 794 ntBASIC20.29■□□□□ 0.84
HS3ST4Q9Y661 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HS3ST4Q9Y661 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HS3ST4Q9Y661 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HS3ST4Q9Y661 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HS3ST4Q9Y661 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.29■□□□□ 0.84
HS3ST4Q9Y661 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HS3ST4Q9Y661 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.29■□□□□ 0.84
HS3ST4Q9Y661 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HS3ST4Q9Y661 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
HS3ST4Q9Y661 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HS3ST4Q9Y661 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.28■□□□□ 0.84
HS3ST4Q9Y661 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HS3ST4Q9Y661 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
HS3ST4Q9Y661 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
HS3ST4Q9Y661 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HS3ST4Q9Y661 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HS3ST4Q9Y661 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HS3ST4Q9Y661 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
HS3ST4Q9Y661 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HS3ST4Q9Y661 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HS3ST4Q9Y661 KRT18P16-201ENST00000510337 1294 ntBASIC20.28■□□□□ 0.84
HS3ST4Q9Y661 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HS3ST4Q9Y661 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.28■□□□□ 0.84
HS3ST4Q9Y661 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HS3ST4Q9Y661 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HS3ST4Q9Y661 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
HS3ST4Q9Y661 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.28■□□□□ 0.84
HS3ST4Q9Y661 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.28■□□□□ 0.84
HS3ST4Q9Y661 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.27■□□□□ 0.84
HS3ST4Q9Y661 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HS3ST4Q9Y661 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HS3ST4Q9Y661 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
HS3ST4Q9Y661 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.27■□□□□ 0.84
HS3ST4Q9Y661 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HS3ST4Q9Y661 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HS3ST4Q9Y661 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.27■□□□□ 0.84
HS3ST4Q9Y661 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.27■□□□□ 0.84
HS3ST4Q9Y661 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HS3ST4Q9Y661 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
HS3ST4Q9Y661 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.27■□□□□ 0.84
HS3ST4Q9Y661 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.27■□□□□ 0.84
HS3ST4Q9Y661 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
HS3ST4Q9Y661 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HS3ST4Q9Y661 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HS3ST4Q9Y661 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
HS3ST4Q9Y661 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.27■□□□□ 0.84
HS3ST4Q9Y661 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
HS3ST4Q9Y661 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.27■□□□□ 0.83
HS3ST4Q9Y661 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
HS3ST4Q9Y661 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.26■□□□□ 0.83
HS3ST4Q9Y661 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HS3ST4Q9Y661 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HS3ST4Q9Y661 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HS3ST4Q9Y661 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.26■□□□□ 0.83
HS3ST4Q9Y661 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HS3ST4Q9Y661 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
HS3ST4Q9Y661 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HS3ST4Q9Y661 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
HS3ST4Q9Y661 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.26■□□□□ 0.83
HS3ST4Q9Y661 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.26■□□□□ 0.83
HS3ST4Q9Y661 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.26■□□□□ 0.83
HS3ST4Q9Y661 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HS3ST4Q9Y661 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.26■□□□□ 0.83
HS3ST4Q9Y661 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HS3ST4Q9Y661 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
HS3ST4Q9Y661 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.25■□□□□ 0.83
HS3ST4Q9Y661 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HS3ST4Q9Y661 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HS3ST4Q9Y661 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HS3ST4Q9Y661 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HS3ST4Q9Y661 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.25■□□□□ 0.83
HS3ST4Q9Y661 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
HS3ST4Q9Y661 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.25■□□□□ 0.83
HS3ST4Q9Y661 TUBB8P6-201ENST00000436895 1288 ntBASIC20.25■□□□□ 0.83
HS3ST4Q9Y661 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.25■□□□□ 0.83
HS3ST4Q9Y661 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.25■□□□□ 0.83
HS3ST4Q9Y661 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HS3ST4Q9Y661 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HS3ST4Q9Y661 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.25■□□□□ 0.83
HS3ST4Q9Y661 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
HS3ST4Q9Y661 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.25■□□□□ 0.83
HS3ST4Q9Y661 AC066615.1-201ENST00000640911 628 ntBASIC20.25■□□□□ 0.83
HS3ST4Q9Y661 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.25■□□□□ 0.83
HS3ST4Q9Y661 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HS3ST4Q9Y661 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HS3ST4Q9Y661 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HS3ST4Q9Y661 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HS3ST4Q9Y661 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
HS3ST4Q9Y661 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
HS3ST4Q9Y661 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms