Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF11Q9Y3C5 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF11Q9Y3C5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF11Q9Y3C5 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF11Q9Y3C5 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RNF11Q9Y3C5 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.16■□□□□ 0.66
RNF11Q9Y3C5 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF11Q9Y3C5 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF11Q9Y3C5 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF11Q9Y3C5 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF11Q9Y3C5 AL121832.2-201ENST00000610979 668 ntBASIC19.16■□□□□ 0.66
RNF11Q9Y3C5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF11Q9Y3C5 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF11Q9Y3C5 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
RNF11Q9Y3C5 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RNF11Q9Y3C5 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF11Q9Y3C5 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.16■□□□□ 0.66
RNF11Q9Y3C5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 AP001271.2-201ENST00000624018 1556 ntBASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RNF11Q9Y3C5 PHGDH-210ENST00000641115 1638 ntBASIC19.14■□□□□ 0.66
RNF11Q9Y3C5 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RNF11Q9Y3C5 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RNF11Q9Y3C5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.14■□□□□ 0.65
RNF11Q9Y3C5 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF11Q9Y3C5 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF11Q9Y3C5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.14■□□□□ 0.65
RNF11Q9Y3C5 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RNF11Q9Y3C5 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF11Q9Y3C5 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF11Q9Y3C5 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF11Q9Y3C5 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.14■□□□□ 0.65
RNF11Q9Y3C5 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF11Q9Y3C5 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF11Q9Y3C5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF11Q9Y3C5 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF11Q9Y3C5 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF11Q9Y3C5 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF11Q9Y3C5 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF11Q9Y3C5 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF11Q9Y3C5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.14■□□□□ 0.65
RNF11Q9Y3C5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF11Q9Y3C5 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF11Q9Y3C5 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.14■□□□□ 0.65
RNF11Q9Y3C5 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
RNF11Q9Y3C5 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF11Q9Y3C5 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF11Q9Y3C5 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RNF11Q9Y3C5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF11Q9Y3C5 NEFHP1-201ENST00000412845 2629 ntBASIC19.13■□□□□ 0.65
RNF11Q9Y3C5 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF11Q9Y3C5 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF11Q9Y3C5 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RNF11Q9Y3C5 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RNF11Q9Y3C5 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.13■□□□□ 0.65
RNF11Q9Y3C5 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF11Q9Y3C5 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
RNF11Q9Y3C5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF11Q9Y3C5 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF11Q9Y3C5 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF11Q9Y3C5 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF11Q9Y3C5 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF11Q9Y3C5 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF11Q9Y3C5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF11Q9Y3C5 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF11Q9Y3C5 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF11Q9Y3C5 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RNF11Q9Y3C5 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms