Protein–RNA interactions for Protein: Q9UQB3

CTNND2, Catenin delta-2, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2Q9UQB3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTNND2Q9UQB3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CTNND2Q9UQB3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.8■■□□□ 1.08
CTNND2Q9UQB3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.8■■□□□ 1.08
CTNND2Q9UQB3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CTNND2Q9UQB3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTNND2Q9UQB3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CTNND2Q9UQB3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.8■■□□□ 1.08
CTNND2Q9UQB3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTNND2Q9UQB3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTNND2Q9UQB3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTNND2Q9UQB3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.8■■□□□ 1.08
CTNND2Q9UQB3 AL020996.1-203ENST00000536896 2307 ntBASIC21.8■■□□□ 1.08
CTNND2Q9UQB3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CTNND2Q9UQB3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.8■■□□□ 1.08
CTNND2Q9UQB3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTNND2Q9UQB3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.8■■□□□ 1.08
CTNND2Q9UQB3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
CTNND2Q9UQB3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CTNND2Q9UQB3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.79■■□□□ 1.08
CTNND2Q9UQB3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CTNND2Q9UQB3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.79■■□□□ 1.08
CTNND2Q9UQB3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.79■■□□□ 1.08
CTNND2Q9UQB3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.79■■□□□ 1.08
CTNND2Q9UQB3 AC018553.1-201ENST00000616682 1458 ntBASIC21.79■■□□□ 1.08
CTNND2Q9UQB3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CTNND2Q9UQB3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CTNND2Q9UQB3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
CTNND2Q9UQB3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.79■■□□□ 1.08
CTNND2Q9UQB3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.79■■□□□ 1.08
CTNND2Q9UQB3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CTNND2Q9UQB3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTNND2Q9UQB3 AL032819.2-201ENST00000624543 2162 ntBASIC21.79■■□□□ 1.08
CTNND2Q9UQB3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.79■■□□□ 1.08
CTNND2Q9UQB3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CTNND2Q9UQB3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.79■■□□□ 1.08
CTNND2Q9UQB3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
CTNND2Q9UQB3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTNND2Q9UQB3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CTNND2Q9UQB3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.78■■□□□ 1.08
CTNND2Q9UQB3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTNND2Q9UQB3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.78■■□□□ 1.08
CTNND2Q9UQB3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.78■■□□□ 1.08
CTNND2Q9UQB3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CTNND2Q9UQB3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.78■■□□□ 1.08
CTNND2Q9UQB3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTNND2Q9UQB3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CTNND2Q9UQB3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTNND2Q9UQB3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTNND2Q9UQB3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTNND2Q9UQB3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.78■■□□□ 1.08
CTNND2Q9UQB3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CTNND2Q9UQB3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
CTNND2Q9UQB3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.78■■□□□ 1.08
CTNND2Q9UQB3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTNND2Q9UQB3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.78■■□□□ 1.08
CTNND2Q9UQB3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.78■■□□□ 1.08
CTNND2Q9UQB3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CTNND2Q9UQB3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTNND2Q9UQB3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTNND2Q9UQB3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTNND2Q9UQB3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTNND2Q9UQB3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.77■■□□□ 1.08
CTNND2Q9UQB3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTNND2Q9UQB3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CTNND2Q9UQB3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTNND2Q9UQB3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.77■■□□□ 1.08
CTNND2Q9UQB3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.77■■□□□ 1.08
CTNND2Q9UQB3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTNND2Q9UQB3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTNND2Q9UQB3 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.77■■□□□ 1.08
CTNND2Q9UQB3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
CTNND2Q9UQB3 CROCCP5-201ENST00000436658 830 ntBASIC21.77■■□□□ 1.08
CTNND2Q9UQB3 AC026185.1-201ENST00000445748 174 ntBASIC21.77■■□□□ 1.08
CTNND2Q9UQB3 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.77■■□□□ 1.08
CTNND2Q9UQB3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.77■■□□□ 1.08
CTNND2Q9UQB3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CTNND2Q9UQB3 RAP2CP1-201ENST00000605103 478 ntBASIC21.77■■□□□ 1.08
CTNND2Q9UQB3 AL137784.2-201ENST00000607332 1000 ntBASIC21.77■■□□□ 1.08
CTNND2Q9UQB3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.77■■□□□ 1.08
CTNND2Q9UQB3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTNND2Q9UQB3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.77■■□□□ 1.08
CTNND2Q9UQB3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CTNND2Q9UQB3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTNND2Q9UQB3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTNND2Q9UQB3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTNND2Q9UQB3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTNND2Q9UQB3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTNND2Q9UQB3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CTNND2Q9UQB3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CTNND2Q9UQB3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTNND2Q9UQB3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTNND2Q9UQB3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.76■■□□□ 1.07
CTNND2Q9UQB3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTNND2Q9UQB3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.76■■□□□ 1.07
CTNND2Q9UQB3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTNND2Q9UQB3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.76■■□□□ 1.07
CTNND2Q9UQB3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CTNND2Q9UQB3 TNXA-203ENST00000507684 2038 ntBASIC21.76■■□□□ 1.07
CTNND2Q9UQB3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms