Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.6■□□□□ 0.57
LHX6Q9UPM6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX6Q9UPM6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LHX6Q9UPM6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX6Q9UPM6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LHX6Q9UPM6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.6■□□□□ 0.57
LHX6Q9UPM6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX6Q9UPM6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LHX6Q9UPM6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LHX6Q9UPM6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.6■□□□□ 0.57
LHX6Q9UPM6 TSPY21P-201ENST00000433481 731 ntBASIC18.6■□□□□ 0.57
LHX6Q9UPM6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.6■□□□□ 0.57
LHX6Q9UPM6 TSPY23P-201ENST00000440136 739 ntBASIC18.6■□□□□ 0.57
LHX6Q9UPM6 KRT17P6-201ENST00000453795 1220 ntBASIC18.6■□□□□ 0.57
LHX6Q9UPM6 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.6■□□□□ 0.57
LHX6Q9UPM6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LHX6Q9UPM6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.6■□□□□ 0.57
LHX6Q9UPM6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.6■□□□□ 0.57
LHX6Q9UPM6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.6■□□□□ 0.57
LHX6Q9UPM6 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX6Q9UPM6 AL031985.4-201ENST00000642138 673 ntBASIC18.6■□□□□ 0.57
LHX6Q9UPM6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LHX6Q9UPM6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LHX6Q9UPM6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.6■□□□□ 0.57
LHX6Q9UPM6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX6Q9UPM6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX6Q9UPM6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.6■□□□□ 0.57
LHX6Q9UPM6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX6Q9UPM6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.6■□□□□ 0.57
LHX6Q9UPM6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LHX6Q9UPM6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LHX6Q9UPM6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LHX6Q9UPM6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
LHX6Q9UPM6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LHX6Q9UPM6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.59■□□□□ 0.57
LHX6Q9UPM6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LHX6Q9UPM6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
LHX6Q9UPM6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
LHX6Q9UPM6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.59■□□□□ 0.57
LHX6Q9UPM6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.59■□□□□ 0.57
LHX6Q9UPM6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LHX6Q9UPM6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LHX6Q9UPM6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LHX6Q9UPM6 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LHX6Q9UPM6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.59■□□□□ 0.57
LHX6Q9UPM6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.59■□□□□ 0.57
LHX6Q9UPM6 SLC25A1P4-201ENST00000567977 778 ntBASIC18.59■□□□□ 0.57
LHX6Q9UPM6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LHX6Q9UPM6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.59■□□□□ 0.57
LHX6Q9UPM6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LHX6Q9UPM6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LHX6Q9UPM6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.59■□□□□ 0.57
LHX6Q9UPM6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LHX6Q9UPM6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.59■□□□□ 0.57
LHX6Q9UPM6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LHX6Q9UPM6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LHX6Q9UPM6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
LHX6Q9UPM6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LHX6Q9UPM6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.57
LHX6Q9UPM6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LHX6Q9UPM6 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LHX6Q9UPM6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LHX6Q9UPM6 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LHX6Q9UPM6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LHX6Q9UPM6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LHX6Q9UPM6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LHX6Q9UPM6 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.58■□□□□ 0.56
LHX6Q9UPM6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.58■□□□□ 0.56
LHX6Q9UPM6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LHX6Q9UPM6 HOMER2P1-201ENST00000455653 964 ntBASIC18.58■□□□□ 0.56
LHX6Q9UPM6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.58■□□□□ 0.56
LHX6Q9UPM6 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.58■□□□□ 0.56
LHX6Q9UPM6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.58■□□□□ 0.56
LHX6Q9UPM6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LHX6Q9UPM6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LHX6Q9UPM6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.58■□□□□ 0.56
LHX6Q9UPM6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.58■□□□□ 0.56
LHX6Q9UPM6 AC139530.3-201ENST00000620344 690 ntBASIC18.58■□□□□ 0.56
LHX6Q9UPM6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
LHX6Q9UPM6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.58■□□□□ 0.56
LHX6Q9UPM6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LHX6Q9UPM6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.58■□□□□ 0.56
LHX6Q9UPM6 AC124283.5-201ENST00000624661 1809 ntBASIC18.58■□□□□ 0.56
LHX6Q9UPM6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LHX6Q9UPM6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LHX6Q9UPM6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
LHX6Q9UPM6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LHX6Q9UPM6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LHX6Q9UPM6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.57■□□□□ 0.56
LHX6Q9UPM6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LHX6Q9UPM6 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.57■□□□□ 0.56
LHX6Q9UPM6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LHX6Q9UPM6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
LHX6Q9UPM6 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LHX6Q9UPM6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.57■□□□□ 0.56
LHX6Q9UPM6 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LHX6Q9UPM6 AC111152.3-201ENST00000569699 673 ntBASIC18.57■□□□□ 0.56
LHX6Q9UPM6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.57■□□□□ 0.56
LHX6Q9UPM6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.57■□□□□ 0.56
LHX6Q9UPM6 AC011558.1-201ENST00000623459 338 ntBASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms