Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ABCF3Q9NUQ8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
ABCF3Q9NUQ8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ABCF3Q9NUQ8 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.94■□□□□ 0.78
ABCF3Q9NUQ8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ABCF3Q9NUQ8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
ABCF3Q9NUQ8 CNN2P6-201ENST00000439038 900 ntBASIC19.94■□□□□ 0.78
ABCF3Q9NUQ8 AL591742.1-201ENST00000604433 565 ntBASIC19.94■□□□□ 0.78
ABCF3Q9NUQ8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ABCF3Q9NUQ8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.94■□□□□ 0.78
ABCF3Q9NUQ8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
ABCF3Q9NUQ8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ABCF3Q9NUQ8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
ABCF3Q9NUQ8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ABCF3Q9NUQ8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 AL691432.2-201ENST00000607222 2038 ntBASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 AC016405.3-201ENST00000607710 860 ntBASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 TMEM179-206ENST00000616017 1645 ntBASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ABCF3Q9NUQ8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ABCF3Q9NUQ8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.92■□□□□ 0.78
ABCF3Q9NUQ8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ABCF3Q9NUQ8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ABCF3Q9NUQ8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ABCF3Q9NUQ8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
ABCF3Q9NUQ8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ABCF3Q9NUQ8 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
ABCF3Q9NUQ8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ABCF3Q9NUQ8 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.92■□□□□ 0.78
ABCF3Q9NUQ8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ABCF3Q9NUQ8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
ABCF3Q9NUQ8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.92■□□□□ 0.78
ABCF3Q9NUQ8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.92■□□□□ 0.78
ABCF3Q9NUQ8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.92■□□□□ 0.78
ABCF3Q9NUQ8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
ABCF3Q9NUQ8 AC231657.2-201ENST00000624556 255 ntBASIC19.92■□□□□ 0.78
ABCF3Q9NUQ8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ABCF3Q9NUQ8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.92■□□□□ 0.78
ABCF3Q9NUQ8 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ABCF3Q9NUQ8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ABCF3Q9NUQ8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ABCF3Q9NUQ8 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
ABCF3Q9NUQ8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
ABCF3Q9NUQ8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.91■□□□□ 0.78
ABCF3Q9NUQ8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
ABCF3Q9NUQ8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
ABCF3Q9NUQ8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
ABCF3Q9NUQ8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ABCF3Q9NUQ8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.91■□□□□ 0.78
ABCF3Q9NUQ8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.91■□□□□ 0.78
ABCF3Q9NUQ8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ABCF3Q9NUQ8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
ABCF3Q9NUQ8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.91■□□□□ 0.78
ABCF3Q9NUQ8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
ABCF3Q9NUQ8 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ABCF3Q9NUQ8 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ABCF3Q9NUQ8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.91■□□□□ 0.78
ABCF3Q9NUQ8 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.91■□□□□ 0.78
ABCF3Q9NUQ8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
ABCF3Q9NUQ8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
ABCF3Q9NUQ8 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ABCF3Q9NUQ8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ABCF3Q9NUQ8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ABCF3Q9NUQ8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms