Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 NTF6G-201ENST00000591094 616 ntBASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB16Q9NRJ7 KRT16P6-202ENST00000425692 1426 ntBASIC17.04■□□□□ 0.32
PCDHB16Q9NRJ7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB16Q9NRJ7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB16Q9NRJ7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB16Q9NRJ7 TNXA-203ENST00000507684 2038 ntBASIC17.04■□□□□ 0.32
PCDHB16Q9NRJ7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB16Q9NRJ7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHB16Q9NRJ7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB16Q9NRJ7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB16Q9NRJ7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHB16Q9NRJ7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PCDHB16Q9NRJ7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB16Q9NRJ7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCDHB16Q9NRJ7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHB16Q9NRJ7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB16Q9NRJ7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PCDHB16Q9NRJ7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHB16Q9NRJ7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB16Q9NRJ7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PCDHB16Q9NRJ7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB16Q9NRJ7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB16Q9NRJ7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB16Q9NRJ7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB16Q9NRJ7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB16Q9NRJ7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHB16Q9NRJ7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB16Q9NRJ7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB16Q9NRJ7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHB16Q9NRJ7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB16Q9NRJ7 NEFHP1-201ENST00000412845 2629 ntBASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 AL691432.2-201ENST00000607222 2038 ntBASIC17.03■□□□□ 0.32
PCDHB16Q9NRJ7 NOC2LP1-202ENST00000452600 2235 ntBASIC17.02■□□□□ 0.32
PCDHB16Q9NRJ7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB16Q9NRJ7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PCDHB16Q9NRJ7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB16Q9NRJ7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHB16Q9NRJ7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB16Q9NRJ7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PCDHB16Q9NRJ7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
PCDHB16Q9NRJ7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB16Q9NRJ7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHB16Q9NRJ7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB16Q9NRJ7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB16Q9NRJ7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB16Q9NRJ7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB16Q9NRJ7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB16Q9NRJ7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB16Q9NRJ7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHB16Q9NRJ7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB16Q9NRJ7 MCRIP2P1-201ENST00000394346 511 ntBASIC17.02■□□□□ 0.32
PCDHB16Q9NRJ7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.02■□□□□ 0.32
PCDHB16Q9NRJ7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHB16Q9NRJ7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms