Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20AQ9NP66 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20AQ9NP66 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.84■□□□□ 0.45
HMG20AQ9NP66 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20AQ9NP66 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HMG20AQ9NP66 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.84■□□□□ 0.45
HMG20AQ9NP66 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
HMG20AQ9NP66 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20AQ9NP66 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.84■□□□□ 0.45
HMG20AQ9NP66 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.84■□□□□ 0.45
HMG20AQ9NP66 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20AQ9NP66 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.84■□□□□ 0.45
HMG20AQ9NP66 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20AQ9NP66 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20AQ9NP66 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.84■□□□□ 0.45
HMG20AQ9NP66 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20AQ9NP66 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20AQ9NP66 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20AQ9NP66 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.84■□□□□ 0.45
HMG20AQ9NP66 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMG20AQ9NP66 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMG20AQ9NP66 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.83■□□□□ 0.45
HMG20AQ9NP66 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
HMG20AQ9NP66 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
HMG20AQ9NP66 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMG20AQ9NP66 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMG20AQ9NP66 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMG20AQ9NP66 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.83■□□□□ 0.45
HMG20AQ9NP66 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMG20AQ9NP66 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMG20AQ9NP66 NOC2LP2-201ENST00000407594 1944 ntBASIC17.83■□□□□ 0.44
HMG20AQ9NP66 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMG20AQ9NP66 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMG20AQ9NP66 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.83■□□□□ 0.44
HMG20AQ9NP66 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.83■□□□□ 0.44
HMG20AQ9NP66 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
HMG20AQ9NP66 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMG20AQ9NP66 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
HMG20AQ9NP66 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HMG20AQ9NP66 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMG20AQ9NP66 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.83■□□□□ 0.44
HMG20AQ9NP66 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMG20AQ9NP66 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
HMG20AQ9NP66 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.83■□□□□ 0.44
HMG20AQ9NP66 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
HMG20AQ9NP66 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.82■□□□□ 0.44
HMG20AQ9NP66 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.82■□□□□ 0.44
HMG20AQ9NP66 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMG20AQ9NP66 CROCCP3-202ENST00000420820 1947 ntBASIC17.82■□□□□ 0.44
HMG20AQ9NP66 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HMG20AQ9NP66 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMG20AQ9NP66 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMG20AQ9NP66 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.82■□□□□ 0.44
HMG20AQ9NP66 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HMG20AQ9NP66 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.82■□□□□ 0.44
HMG20AQ9NP66 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMG20AQ9NP66 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.82■□□□□ 0.44
HMG20AQ9NP66 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMG20AQ9NP66 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.82■□□□□ 0.44
HMG20AQ9NP66 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HMG20AQ9NP66 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HMG20AQ9NP66 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMG20AQ9NP66 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMG20AQ9NP66 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMG20AQ9NP66 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMG20AQ9NP66 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMG20AQ9NP66 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMG20AQ9NP66 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.81■□□□□ 0.44
HMG20AQ9NP66 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.81■□□□□ 0.44
HMG20AQ9NP66 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMG20AQ9NP66 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HMG20AQ9NP66 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMG20AQ9NP66 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HMG20AQ9NP66 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.81■□□□□ 0.44
HMG20AQ9NP66 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HMG20AQ9NP66 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMG20AQ9NP66 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMG20AQ9NP66 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.81■□□□□ 0.44
HMG20AQ9NP66 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
HMG20AQ9NP66 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.81■□□□□ 0.44
HMG20AQ9NP66 AC012414.1-201ENST00000556676 535 ntBASIC17.81■□□□□ 0.44
HMG20AQ9NP66 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.81■□□□□ 0.44
HMG20AQ9NP66 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
HMG20AQ9NP66 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HMG20AQ9NP66 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HMG20AQ9NP66 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
HMG20AQ9NP66 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.81■□□□□ 0.44
HMG20AQ9NP66 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
HMG20AQ9NP66 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMG20AQ9NP66 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HMG20AQ9NP66 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HMG20AQ9NP66 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms