Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM2Q9C040 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.08■□□□□ 0.48
TRIM2Q9C040 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.08■□□□□ 0.48
TRIM2Q9C040 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.08■□□□□ 0.48
TRIM2Q9C040 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.08■□□□□ 0.48
TRIM2Q9C040 AC133041.1-202ENST00000642053 222 ntBASIC18.08■□□□□ 0.48
TRIM2Q9C040 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM2Q9C040 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM2Q9C040 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM2Q9C040 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM2Q9C040 AC007952.6-201ENST00000573168 2673 ntBASIC18.08■□□□□ 0.48
TRIM2Q9C040 AC003957.1-201ENST00000625108 2673 ntBASIC18.08■□□□□ 0.48
TRIM2Q9C040 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM2Q9C040 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM2Q9C040 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM2Q9C040 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM2Q9C040 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.08■□□□□ 0.48
TRIM2Q9C040 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM2Q9C040 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM2Q9C040 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM2Q9C040 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM2Q9C040 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM2Q9C040 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM2Q9C040 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM2Q9C040 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM2Q9C040 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM2Q9C040 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM2Q9C040 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM2Q9C040 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM2Q9C040 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM2Q9C040 MIPEPP3-201ENST00000412105 444 ntBASIC18.07■□□□□ 0.48
TRIM2Q9C040 AL390719.1-204ENST00000412397 1219 ntBASIC18.07■□□□□ 0.48
TRIM2Q9C040 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM2Q9C040 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.07■□□□□ 0.48
TRIM2Q9C040 KRT18P6-201ENST00000555540 1265 ntBASIC18.07■□□□□ 0.48
TRIM2Q9C040 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM2Q9C040 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM2Q9C040 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM2Q9C040 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM2Q9C040 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM2Q9C040 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM2Q9C040 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM2Q9C040 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM2Q9C040 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TRIM2Q9C040 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM2Q9C040 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM2Q9C040 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TRIM2Q9C040 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.06■□□□□ 0.48
TRIM2Q9C040 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM2Q9C040 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TRIM2Q9C040 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM2Q9C040 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM2Q9C040 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TRIM2Q9C040 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM2Q9C040 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TRIM2Q9C040 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM2Q9C040 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM2Q9C040 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.06■□□□□ 0.48
TRIM2Q9C040 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM2Q9C040 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM2Q9C040 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.06■□□□□ 0.48
TRIM2Q9C040 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.06■□□□□ 0.48
TRIM2Q9C040 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM2Q9C040 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
TRIM2Q9C040 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
TRIM2Q9C040 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM2Q9C040 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM2Q9C040 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM2Q9C040 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM2Q9C040 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.06■□□□□ 0.48
TRIM2Q9C040 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TRIM2Q9C040 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM2Q9C040 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM2Q9C040 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM2Q9C040 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM2Q9C040 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM2Q9C040 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM2Q9C040 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM2Q9C040 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM2Q9C040 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM2Q9C040 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM2Q9C040 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM2Q9C040 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRIM2Q9C040 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM2Q9C040 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.05■□□□□ 0.48
TRIM2Q9C040 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.05■□□□□ 0.48
TRIM2Q9C040 MIR4758-201ENST00000577688 71 ntBASIC18.05■□□□□ 0.48
TRIM2Q9C040 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM2Q9C040 AC092118.2-201ENST00000613495 667 ntBASIC18.05■□□□□ 0.48
TRIM2Q9C040 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM2Q9C040 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM2Q9C040 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM2Q9C040 AC116562.4-201ENST00000641316 2276 ntBASIC18.05■□□□□ 0.48
TRIM2Q9C040 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM2Q9C040 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM2Q9C040 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM2Q9C040 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
TRIM2Q9C040 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
TRIM2Q9C040 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.04■□□□□ 0.48
TRIM2Q9C040 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms