Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LITAFQ99732 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LITAFQ99732 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LITAFQ99732 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC13.1□□□□□ -0.31
LITAFQ99732 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC13.1□□□□□ -0.31
LITAFQ99732 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
LITAFQ99732 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
LITAFQ99732 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LITAFQ99732 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
LITAFQ99732 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
LITAFQ99732 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LITAFQ99732 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
LITAFQ99732 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LITAFQ99732 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.1□□□□□ -0.31
LITAFQ99732 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.1□□□□□ -0.31
LITAFQ99732 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LITAFQ99732 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
LITAFQ99732 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LITAFQ99732 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LITAFQ99732 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
LITAFQ99732 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LITAFQ99732 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LITAFQ99732 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LITAFQ99732 TEX21P-204ENST00000641479 1693 ntBASIC13.09□□□□□ -0.31
LITAFQ99732 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LITAFQ99732 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC13.09□□□□□ -0.31
LITAFQ99732 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
LITAFQ99732 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
LITAFQ99732 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LITAFQ99732 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LITAFQ99732 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LITAFQ99732 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LITAFQ99732 CREM-229ENST00000474362 1030 ntTSL 2 BASIC13.09□□□□□ -0.31
LITAFQ99732 QDPR-206ENST00000508623 601 ntTSL 3 BASIC13.09□□□□□ -0.31
LITAFQ99732 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC13.09□□□□□ -0.31
LITAFQ99732 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC13.09□□□□□ -0.31
LITAFQ99732 DUX4L19-201ENST00000557448 1267 ntBASIC13.09□□□□□ -0.31
LITAFQ99732 MIR3621-201ENST00000580529 85 ntBASIC13.09□□□□□ -0.31
LITAFQ99732 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC13.09□□□□□ -0.31
LITAFQ99732 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC13.09□□□□□ -0.31
LITAFQ99732 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LITAFQ99732 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
LITAFQ99732 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LITAFQ99732 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LITAFQ99732 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC13.09□□□□□ -0.31
LITAFQ99732 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LITAFQ99732 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC13.09□□□□□ -0.31
LITAFQ99732 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LITAFQ99732 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
LITAFQ99732 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LITAFQ99732 MADD-208ENST00000405573 1823 ntTSL 5 BASIC13.09□□□□□ -0.31
LITAFQ99732 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LITAFQ99732 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
LITAFQ99732 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC13.08□□□□□ -0.31
LITAFQ99732 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
LITAFQ99732 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
LITAFQ99732 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC13.08□□□□□ -0.31
LITAFQ99732 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
LITAFQ99732 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LITAFQ99732 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LITAFQ99732 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC13.08□□□□□ -0.32
LITAFQ99732 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC13.08□□□□□ -0.32
LITAFQ99732 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LITAFQ99732 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC13.08□□□□□ -0.32
LITAFQ99732 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.08□□□□□ -0.32
LITAFQ99732 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
LITAFQ99732 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
LITAFQ99732 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LITAFQ99732 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
LITAFQ99732 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LITAFQ99732 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
LITAFQ99732 AL512631.2-201ENST00000604634 923 ntBASIC13.08□□□□□ -0.32
LITAFQ99732 FAM21FP-204ENST00000608637 956 ntBASIC13.08□□□□□ -0.32
LITAFQ99732 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LITAFQ99732 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LITAFQ99732 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
LITAFQ99732 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LITAFQ99732 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LITAFQ99732 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
LITAFQ99732 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LITAFQ99732 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LITAFQ99732 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LITAFQ99732 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LITAFQ99732 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LITAFQ99732 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LITAFQ99732 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LITAFQ99732 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LITAFQ99732 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LITAFQ99732 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LITAFQ99732 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LITAFQ99732 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
LITAFQ99732 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LITAFQ99732 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LITAFQ99732 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
LITAFQ99732 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LITAFQ99732 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LITAFQ99732 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LITAFQ99732 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LITAFQ99732 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LITAFQ99732 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms