Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSMD1Q96PZ7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSMD1Q96PZ7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.81■□□□□ 0.28
CSMD1Q96PZ7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CSMD1Q96PZ7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSMD1Q96PZ7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSMD1Q96PZ7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.81■□□□□ 0.28
CSMD1Q96PZ7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSMD1Q96PZ7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.81■□□□□ 0.28
CSMD1Q96PZ7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CSMD1Q96PZ7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CSMD1Q96PZ7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CSMD1Q96PZ7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.81■□□□□ 0.28
CSMD1Q96PZ7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSMD1Q96PZ7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CSMD1Q96PZ7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSMD1Q96PZ7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.81■□□□□ 0.28
CSMD1Q96PZ7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSMD1Q96PZ7 KRT18P38-201ENST00000449496 1282 ntBASIC16.81■□□□□ 0.28
CSMD1Q96PZ7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSMD1Q96PZ7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 AL117328.2-201ENST00000624617 1940 ntBASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 AC026310.3-201ENST00000625186 2373 ntBASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 YBX1P10-201ENST00000444752 975 ntBASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 AC008040.2-201ENST00000461049 708 ntBASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSMD1Q96PZ7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CSMD1Q96PZ7 AC106795.1-205ENST00000512851 1056 ntBASIC16.79■□□□□ 0.28
CSMD1Q96PZ7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSMD1Q96PZ7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CSMD1Q96PZ7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSMD1Q96PZ7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSMD1Q96PZ7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSMD1Q96PZ7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CSMD1Q96PZ7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CSMD1Q96PZ7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CSMD1Q96PZ7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.79■□□□□ 0.28
CSMD1Q96PZ7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSMD1Q96PZ7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSMD1Q96PZ7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSMD1Q96PZ7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSMD1Q96PZ7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSMD1Q96PZ7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CSMD1Q96PZ7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSMD1Q96PZ7 SLC25A1P2-201ENST00000430693 912 ntBASIC16.79■□□□□ 0.28
CSMD1Q96PZ7 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.79■□□□□ 0.28
CSMD1Q96PZ7 AL732292.2-201ENST00000609649 430 ntBASIC16.79■□□□□ 0.28
CSMD1Q96PZ7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.79■□□□□ 0.28
CSMD1Q96PZ7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.79■□□□□ 0.28
CSMD1Q96PZ7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSMD1Q96PZ7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.79■□□□□ 0.28
CSMD1Q96PZ7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
CSMD1Q96PZ7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSMD1Q96PZ7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CSMD1Q96PZ7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CSMD1Q96PZ7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.78■□□□□ 0.28
CSMD1Q96PZ7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CSMD1Q96PZ7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSMD1Q96PZ7 PGM5P4-201ENST00000421970 445 ntBASIC16.78■□□□□ 0.28
CSMD1Q96PZ7 AL441883.1-201ENST00000566170 1045 ntBASIC16.78■□□□□ 0.28
CSMD1Q96PZ7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CSMD1Q96PZ7 AL031008.1-201ENST00000619963 541 ntBASIC16.78■□□□□ 0.28
CSMD1Q96PZ7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSMD1Q96PZ7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.78■□□□□ 0.28
CSMD1Q96PZ7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CSMD1Q96PZ7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSMD1Q96PZ7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSMD1Q96PZ7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSMD1Q96PZ7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSMD1Q96PZ7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSMD1Q96PZ7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.78■□□□□ 0.28
CSMD1Q96PZ7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.78■□□□□ 0.28
CSMD1Q96PZ7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSMD1Q96PZ7 AC023632.3-201ENST00000521633 145 ntBASIC16.78■□□□□ 0.28
CSMD1Q96PZ7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSMD1Q96PZ7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms