Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 GPX1P1-201ENST00000388829 606 ntBASIC19.86■□□□□ 0.77
LRRC39Q96DD0 LSM12P1-201ENST00000411836 588 ntBASIC19.86■□□□□ 0.77
LRRC39Q96DD0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC39Q96DD0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
LRRC39Q96DD0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC39Q96DD0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
LRRC39Q96DD0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC39Q96DD0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
LRRC39Q96DD0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC39Q96DD0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC39Q96DD0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.86■□□□□ 0.77
LRRC39Q96DD0 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC39Q96DD0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC39Q96DD0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC39Q96DD0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.85■□□□□ 0.77
LRRC39Q96DD0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.85■□□□□ 0.77
LRRC39Q96DD0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.85■□□□□ 0.77
LRRC39Q96DD0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC39Q96DD0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.85■□□□□ 0.77
LRRC39Q96DD0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.85■□□□□ 0.77
LRRC39Q96DD0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.85■□□□□ 0.77
LRRC39Q96DD0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
LRRC39Q96DD0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
LRRC39Q96DD0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.85■□□□□ 0.77
LRRC39Q96DD0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC39Q96DD0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC39Q96DD0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC39Q96DD0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.85■□□□□ 0.77
LRRC39Q96DD0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.85■□□□□ 0.77
LRRC39Q96DD0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC39Q96DD0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC39Q96DD0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC39Q96DD0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
LRRC39Q96DD0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC39Q96DD0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC39Q96DD0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC39Q96DD0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC39Q96DD0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC39Q96DD0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC39Q96DD0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC39Q96DD0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.84■□□□□ 0.77
LRRC39Q96DD0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC39Q96DD0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.84■□□□□ 0.77
LRRC39Q96DD0 AL162430.1-201ENST00000480705 870 ntBASIC19.84■□□□□ 0.77
LRRC39Q96DD0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC39Q96DD0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
LRRC39Q96DD0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.84■□□□□ 0.77
LRRC39Q96DD0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
LRRC39Q96DD0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC39Q96DD0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
LRRC39Q96DD0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
LRRC39Q96DD0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC39Q96DD0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC39Q96DD0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC39Q96DD0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC39Q96DD0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC39Q96DD0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC39Q96DD0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
LRRC39Q96DD0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC39Q96DD0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC39Q96DD0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC39Q96DD0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.83■□□□□ 0.77
LRRC39Q96DD0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC39Q96DD0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC39Q96DD0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.83■□□□□ 0.77
LRRC39Q96DD0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC39Q96DD0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.83■□□□□ 0.77
LRRC39Q96DD0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
LRRC39Q96DD0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC39Q96DD0 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC39Q96DD0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC39Q96DD0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC39Q96DD0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.83■□□□□ 0.77
LRRC39Q96DD0 AC073210.2-201ENST00000430369 194 ntBASIC19.83■□□□□ 0.77
LRRC39Q96DD0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC39Q96DD0 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.83■□□□□ 0.77
LRRC39Q96DD0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.83■□□□□ 0.76
LRRC39Q96DD0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.83■□□□□ 0.76
LRRC39Q96DD0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC39Q96DD0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.83■□□□□ 0.76
LRRC39Q96DD0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC39Q96DD0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.82■□□□□ 0.76
LRRC39Q96DD0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC39Q96DD0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.82■□□□□ 0.76
LRRC39Q96DD0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC39Q96DD0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC39Q96DD0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.82■□□□□ 0.76
LRRC39Q96DD0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.82■□□□□ 0.76
LRRC39Q96DD0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.82■□□□□ 0.76
LRRC39Q96DD0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
LRRC39Q96DD0 MIR5787-201ENST00000611784 55 ntBASIC19.82■□□□□ 0.76
LRRC39Q96DD0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC39Q96DD0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC39Q96DD0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.82■□□□□ 0.76
LRRC39Q96DD0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.82■□□□□ 0.76
LRRC39Q96DD0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC39Q96DD0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC39Q96DD0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC39Q96DD0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC39Q96DD0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms