Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.24■□□□□ 0.83
HDAC11Q96DB2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HDAC11Q96DB2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC11Q96DB2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
HDAC11Q96DB2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC11Q96DB2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
HDAC11Q96DB2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.23■□□□□ 0.83
HDAC11Q96DB2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC11Q96DB2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC11Q96DB2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC11Q96DB2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC11Q96DB2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.23■□□□□ 0.83
HDAC11Q96DB2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC11Q96DB2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC11Q96DB2 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC11Q96DB2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.23■□□□□ 0.83
HDAC11Q96DB2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.23■□□□□ 0.83
HDAC11Q96DB2 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.23■□□□□ 0.83
HDAC11Q96DB2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.23■□□□□ 0.83
HDAC11Q96DB2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.23■□□□□ 0.83
HDAC11Q96DB2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.23■□□□□ 0.83
HDAC11Q96DB2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.23■□□□□ 0.83
HDAC11Q96DB2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.23■□□□□ 0.83
HDAC11Q96DB2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.23■□□□□ 0.83
HDAC11Q96DB2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.23■□□□□ 0.83
HDAC11Q96DB2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC11Q96DB2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
HDAC11Q96DB2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC11Q96DB2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC11Q96DB2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC11Q96DB2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC11Q96DB2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HDAC11Q96DB2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HDAC11Q96DB2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HDAC11Q96DB2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HDAC11Q96DB2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.22■□□□□ 0.83
HDAC11Q96DB2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HDAC11Q96DB2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HDAC11Q96DB2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.22■□□□□ 0.83
HDAC11Q96DB2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
HDAC11Q96DB2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
HDAC11Q96DB2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HDAC11Q96DB2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HDAC11Q96DB2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HDAC11Q96DB2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.22■□□□□ 0.83
HDAC11Q96DB2 RPS2P52-201ENST00000469610 820 ntBASIC20.22■□□□□ 0.83
HDAC11Q96DB2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.22■□□□□ 0.83
HDAC11Q96DB2 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.22■□□□□ 0.83
HDAC11Q96DB2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.22■□□□□ 0.83
HDAC11Q96DB2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HDAC11Q96DB2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HDAC11Q96DB2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HDAC11Q96DB2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.22■□□□□ 0.83
HDAC11Q96DB2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.22■□□□□ 0.83
HDAC11Q96DB2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HDAC11Q96DB2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
HDAC11Q96DB2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.21■□□□□ 0.83
HDAC11Q96DB2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC11Q96DB2 TFP1-202ENST00000475455 1573 ntBASIC20.21■□□□□ 0.83
HDAC11Q96DB2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC11Q96DB2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC11Q96DB2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC11Q96DB2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC11Q96DB2 TREX1-205ENST00000625293 1783 ntBASIC20.21■□□□□ 0.83
HDAC11Q96DB2 AC124283.5-201ENST00000624661 1809 ntBASIC20.21■□□□□ 0.83
HDAC11Q96DB2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
HDAC11Q96DB2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC11Q96DB2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC11Q96DB2 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.21■□□□□ 0.83
HDAC11Q96DB2 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC11Q96DB2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC11Q96DB2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.21■□□□□ 0.83
HDAC11Q96DB2 SOX15-203ENST00000570788 1093 ntBASIC20.21■□□□□ 0.83
HDAC11Q96DB2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
HDAC11Q96DB2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.21■□□□□ 0.83
HDAC11Q96DB2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.21■□□□□ 0.83
HDAC11Q96DB2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC11Q96DB2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC11Q96DB2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.21■□□□□ 0.83
HDAC11Q96DB2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.21■□□□□ 0.83
HDAC11Q96DB2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC11Q96DB2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.21■□□□□ 0.83
HDAC11Q96DB2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.21■□□□□ 0.83
HDAC11Q96DB2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC11Q96DB2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.21■□□□□ 0.83
HDAC11Q96DB2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
HDAC11Q96DB2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC11Q96DB2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
HDAC11Q96DB2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.2■□□□□ 0.82
HDAC11Q96DB2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HDAC11Q96DB2 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HDAC11Q96DB2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
HDAC11Q96DB2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
HDAC11Q96DB2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.2■□□□□ 0.82
HDAC11Q96DB2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.2■□□□□ 0.82
HDAC11Q96DB2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
HDAC11Q96DB2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
HDAC11Q96DB2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HDAC11Q96DB2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HDAC11Q96DB2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms