Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN23Q96B33 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN23Q96B33 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.74■□□□□ 0.75
CLDN23Q96B33 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.74■□□□□ 0.75
CLDN23Q96B33 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN23Q96B33 AL136038.3-201ENST00000561909 1096 ntBASIC19.74■□□□□ 0.75
CLDN23Q96B33 AC069148.1-201ENST00000608741 768 ntBASIC19.74■□□□□ 0.75
CLDN23Q96B33 AL023973.1-201ENST00000624619 620 ntBASIC19.74■□□□□ 0.75
CLDN23Q96B33 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN23Q96B33 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CLDN23Q96B33 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN23Q96B33 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN23Q96B33 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CLDN23Q96B33 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN23Q96B33 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN23Q96B33 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.74■□□□□ 0.75
CLDN23Q96B33 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN23Q96B33 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN23Q96B33 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN23Q96B33 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.73■□□□□ 0.75
CLDN23Q96B33 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CLDN23Q96B33 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.73■□□□□ 0.75
CLDN23Q96B33 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN23Q96B33 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.73■□□□□ 0.75
CLDN23Q96B33 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN23Q96B33 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.73■□□□□ 0.75
CLDN23Q96B33 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.73■□□□□ 0.75
CLDN23Q96B33 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.73■□□□□ 0.75
CLDN23Q96B33 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.73■□□□□ 0.75
CLDN23Q96B33 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
CLDN23Q96B33 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN23Q96B33 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CLDN23Q96B33 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN23Q96B33 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN23Q96B33 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.73■□□□□ 0.75
CLDN23Q96B33 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN23Q96B33 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN23Q96B33 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.73■□□□□ 0.75
CLDN23Q96B33 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN23Q96B33 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN23Q96B33 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.73■□□□□ 0.75
CLDN23Q96B33 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CLDN23Q96B33 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CLDN23Q96B33 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.72■□□□□ 0.75
CLDN23Q96B33 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN23Q96B33 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CLDN23Q96B33 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN23Q96B33 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CLDN23Q96B33 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN23Q96B33 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN23Q96B33 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN23Q96B33 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.72■□□□□ 0.75
CLDN23Q96B33 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN23Q96B33 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.72■□□□□ 0.75
CLDN23Q96B33 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.72■□□□□ 0.75
CLDN23Q96B33 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN23Q96B33 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.72■□□□□ 0.75
CLDN23Q96B33 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.72■□□□□ 0.75
CLDN23Q96B33 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.72■□□□□ 0.75
CLDN23Q96B33 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.72■□□□□ 0.75
CLDN23Q96B33 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN23Q96B33 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN23Q96B33 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN23Q96B33 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.71■□□□□ 0.75
CLDN23Q96B33 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN23Q96B33 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN23Q96B33 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.71■□□□□ 0.75
CLDN23Q96B33 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN23Q96B33 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN23Q96B33 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.71■□□□□ 0.75
CLDN23Q96B33 KRT18P38-201ENST00000449496 1282 ntBASIC19.71■□□□□ 0.75
CLDN23Q96B33 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.71■□□□□ 0.75
CLDN23Q96B33 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.71■□□□□ 0.75
CLDN23Q96B33 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN23Q96B33 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.71■□□□□ 0.75
CLDN23Q96B33 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN23Q96B33 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN23Q96B33 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN23Q96B33 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN23Q96B33 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN23Q96B33 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN23Q96B33 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN23Q96B33 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CLDN23Q96B33 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.7■□□□□ 0.74
CLDN23Q96B33 PLK5-205ENST00000642079 1969 ntBASIC19.7■□□□□ 0.74
CLDN23Q96B33 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN23Q96B33 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.7■□□□□ 0.74
CLDN23Q96B33 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.7■□□□□ 0.74
CLDN23Q96B33 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.7■□□□□ 0.74
CLDN23Q96B33 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.7■□□□□ 0.74
CLDN23Q96B33 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.7■□□□□ 0.74
CLDN23Q96B33 AL691432.3-201ENST00000621860 400 ntBASIC19.7■□□□□ 0.74
CLDN23Q96B33 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN23Q96B33 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN23Q96B33 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.7■□□□□ 0.74
CLDN23Q96B33 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN23Q96B33 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN23Q96B33 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN23Q96B33 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN23Q96B33 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms