Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BBS1Q8NFJ9 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.68■□□□□ 0.42
BBS1Q8NFJ9 MFSD11-216ENST00000590393 1141 ntBASIC17.68■□□□□ 0.42
BBS1Q8NFJ9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BBS1Q8NFJ9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
BBS1Q8NFJ9 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BBS1Q8NFJ9 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BBS1Q8NFJ9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BBS1Q8NFJ9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BBS1Q8NFJ9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BBS1Q8NFJ9 NEFHP1-201ENST00000412845 2629 ntBASIC17.68■□□□□ 0.42
BBS1Q8NFJ9 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
BBS1Q8NFJ9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
BBS1Q8NFJ9 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BBS1Q8NFJ9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BBS1Q8NFJ9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BBS1Q8NFJ9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BBS1Q8NFJ9 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BBS1Q8NFJ9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BBS1Q8NFJ9 LINC01465-201ENST00000408887 1940 ntBASIC17.67■□□□□ 0.42
BBS1Q8NFJ9 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BBS1Q8NFJ9 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BBS1Q8NFJ9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.67■□□□□ 0.42
BBS1Q8NFJ9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BBS1Q8NFJ9 KRT18P68-201ENST00000392293 1000 ntBASIC17.67■□□□□ 0.42
BBS1Q8NFJ9 CNN2P6-201ENST00000439038 900 ntBASIC17.67■□□□□ 0.42
BBS1Q8NFJ9 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BBS1Q8NFJ9 AC100791.3-201ENST00000617619 330 ntBASIC17.67■□□□□ 0.42
BBS1Q8NFJ9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.67■□□□□ 0.42
BBS1Q8NFJ9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
BBS1Q8NFJ9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
BBS1Q8NFJ9 PHGDH-210ENST00000641115 1638 ntBASIC17.67■□□□□ 0.42
BBS1Q8NFJ9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
BBS1Q8NFJ9 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BBS1Q8NFJ9 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
BBS1Q8NFJ9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BBS1Q8NFJ9 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BBS1Q8NFJ9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BBS1Q8NFJ9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.67■□□□□ 0.42
BBS1Q8NFJ9 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
BBS1Q8NFJ9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 AC068338.2-201ENST00000563278 1430 ntBASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 AL355472.2-201ENST00000422958 438 ntBASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BBS1Q8NFJ9 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
BBS1Q8NFJ9 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
BBS1Q8NFJ9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BBS1Q8NFJ9 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
BBS1Q8NFJ9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.65■□□□□ 0.42
BBS1Q8NFJ9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BBS1Q8NFJ9 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.65■□□□□ 0.42
BBS1Q8NFJ9 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
BBS1Q8NFJ9 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BBS1Q8NFJ9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BBS1Q8NFJ9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.65■□□□□ 0.42
BBS1Q8NFJ9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
BBS1Q8NFJ9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.65■□□□□ 0.42
BBS1Q8NFJ9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
BBS1Q8NFJ9 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
BBS1Q8NFJ9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BBS1Q8NFJ9 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
BBS1Q8NFJ9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.65■□□□□ 0.42
BBS1Q8NFJ9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BBS1Q8NFJ9 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.65■□□□□ 0.42
BBS1Q8NFJ9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
BBS1Q8NFJ9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.65■□□□□ 0.42
BBS1Q8NFJ9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
BBS1Q8NFJ9 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BBS1Q8NFJ9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
BBS1Q8NFJ9 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.65■□□□□ 0.42
BBS1Q8NFJ9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BBS1Q8NFJ9 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms