Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.42■□□□□ 0.54
NUP43Q8NFH3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
NUP43Q8NFH3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.42■□□□□ 0.54
NUP43Q8NFH3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.42■□□□□ 0.54
NUP43Q8NFH3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.42■□□□□ 0.54
NUP43Q8NFH3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
NUP43Q8NFH3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
NUP43Q8NFH3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NUP43Q8NFH3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.42■□□□□ 0.54
NUP43Q8NFH3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
NUP43Q8NFH3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
NUP43Q8NFH3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NUP43Q8NFH3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.41■□□□□ 0.54
NUP43Q8NFH3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.41■□□□□ 0.54
NUP43Q8NFH3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.41■□□□□ 0.54
NUP43Q8NFH3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
NUP43Q8NFH3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NUP43Q8NFH3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.41■□□□□ 0.54
NUP43Q8NFH3 AL355802.2-201ENST00000402069 882 ntBASIC18.41■□□□□ 0.54
NUP43Q8NFH3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NUP43Q8NFH3 HLA-L-209ENST00000420110 1011 ntBASIC18.41■□□□□ 0.54
NUP43Q8NFH3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.41■□□□□ 0.54
NUP43Q8NFH3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.41■□□□□ 0.54
NUP43Q8NFH3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.41■□□□□ 0.54
NUP43Q8NFH3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.41■□□□□ 0.54
NUP43Q8NFH3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.41■□□□□ 0.54
NUP43Q8NFH3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NUP43Q8NFH3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.41■□□□□ 0.54
NUP43Q8NFH3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NUP43Q8NFH3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NUP43Q8NFH3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
NUP43Q8NFH3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.4■□□□□ 0.54
NUP43Q8NFH3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.4■□□□□ 0.54
NUP43Q8NFH3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NUP43Q8NFH3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
NUP43Q8NFH3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NUP43Q8NFH3 AC124283.5-201ENST00000624661 1809 ntBASIC18.4■□□□□ 0.54
NUP43Q8NFH3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NUP43Q8NFH3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.4■□□□□ 0.54
NUP43Q8NFH3 RPS2P52-201ENST00000469610 820 ntBASIC18.4■□□□□ 0.54
NUP43Q8NFH3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.4■□□□□ 0.54
NUP43Q8NFH3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.4■□□□□ 0.54
NUP43Q8NFH3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NUP43Q8NFH3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.4■□□□□ 0.54
NUP43Q8NFH3 AC116562.4-201ENST00000641316 2276 ntBASIC18.4■□□□□ 0.54
NUP43Q8NFH3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
NUP43Q8NFH3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.4■□□□□ 0.54
NUP43Q8NFH3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NUP43Q8NFH3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NUP43Q8NFH3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.4■□□□□ 0.54
NUP43Q8NFH3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NUP43Q8NFH3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
NUP43Q8NFH3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
NUP43Q8NFH3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NUP43Q8NFH3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
NUP43Q8NFH3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
NUP43Q8NFH3 TFP1-202ENST00000475455 1573 ntBASIC18.39■□□□□ 0.53
NUP43Q8NFH3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.39■□□□□ 0.53
NUP43Q8NFH3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.39■□□□□ 0.53
NUP43Q8NFH3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NUP43Q8NFH3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NUP43Q8NFH3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.39■□□□□ 0.53
NUP43Q8NFH3 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.39■□□□□ 0.53
NUP43Q8NFH3 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.39■□□□□ 0.53
NUP43Q8NFH3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.39■□□□□ 0.53
NUP43Q8NFH3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
NUP43Q8NFH3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NUP43Q8NFH3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NUP43Q8NFH3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NUP43Q8NFH3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.39■□□□□ 0.53
NUP43Q8NFH3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.39■□□□□ 0.53
NUP43Q8NFH3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NUP43Q8NFH3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NUP43Q8NFH3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NUP43Q8NFH3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NUP43Q8NFH3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NUP43Q8NFH3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NUP43Q8NFH3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.38■□□□□ 0.53
NUP43Q8NFH3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NUP43Q8NFH3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
NUP43Q8NFH3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NUP43Q8NFH3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NUP43Q8NFH3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NUP43Q8NFH3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NUP43Q8NFH3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.38■□□□□ 0.53
NUP43Q8NFH3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.38■□□□□ 0.53
NUP43Q8NFH3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.38■□□□□ 0.53
NUP43Q8NFH3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.38■□□□□ 0.53
NUP43Q8NFH3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NUP43Q8NFH3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.38■□□□□ 0.53
NUP43Q8NFH3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NUP43Q8NFH3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NUP43Q8NFH3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
NUP43Q8NFH3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NUP43Q8NFH3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.38■□□□□ 0.53
NUP43Q8NFH3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NUP43Q8NFH3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.38■□□□□ 0.53
NUP43Q8NFH3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NUP43Q8NFH3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.37■□□□□ 0.53
NUP43Q8NFH3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms