Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTTNQ86VV8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.33■□□□□ 0.37
RTTNQ86VV8 AC026366.1-201ENST00000488803 879 ntBASIC17.33■□□□□ 0.37
RTTNQ86VV8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.33■□□□□ 0.37
RTTNQ86VV8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.33■□□□□ 0.37
RTTNQ86VV8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.33■□□□□ 0.37
RTTNQ86VV8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTTNQ86VV8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
RTTNQ86VV8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.33■□□□□ 0.37
RTTNQ86VV8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTTNQ86VV8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTTNQ86VV8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTTNQ86VV8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
RTTNQ86VV8 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RTTNQ86VV8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RTTNQ86VV8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTTNQ86VV8 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTTNQ86VV8 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTTNQ86VV8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.33■□□□□ 0.36
RTTNQ86VV8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RTTNQ86VV8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RTTNQ86VV8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.33■□□□□ 0.36
RTTNQ86VV8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.33■□□□□ 0.36
RTTNQ86VV8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.33■□□□□ 0.36
RTTNQ86VV8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTTNQ86VV8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RTTNQ86VV8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RTTNQ86VV8 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.33■□□□□ 0.36
RTTNQ86VV8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.32■□□□□ 0.36
RTTNQ86VV8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.32■□□□□ 0.36
RTTNQ86VV8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTTNQ86VV8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTTNQ86VV8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTTNQ86VV8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTTNQ86VV8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTTNQ86VV8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.32■□□□□ 0.36
RTTNQ86VV8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.32■□□□□ 0.36
RTTNQ86VV8 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RTTNQ86VV8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RTTNQ86VV8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTTNQ86VV8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTTNQ86VV8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTTNQ86VV8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.32■□□□□ 0.36
RTTNQ86VV8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTTNQ86VV8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.32■□□□□ 0.36
RTTNQ86VV8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTTNQ86VV8 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTTNQ86VV8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.32■□□□□ 0.36
RTTNQ86VV8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTTNQ86VV8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTTNQ86VV8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTTNQ86VV8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTTNQ86VV8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTTNQ86VV8 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.31■□□□□ 0.36
RTTNQ86VV8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTTNQ86VV8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTTNQ86VV8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RTTNQ86VV8 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.31■□□□□ 0.36
RTTNQ86VV8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RTTNQ86VV8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTTNQ86VV8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTTNQ86VV8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTTNQ86VV8 MIR718-201ENST00000390190 70 ntBASIC17.31■□□□□ 0.36
RTTNQ86VV8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTTNQ86VV8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RTTNQ86VV8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RTTNQ86VV8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.31■□□□□ 0.36
RTTNQ86VV8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.31■□□□□ 0.36
RTTNQ86VV8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTTNQ86VV8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.31■□□□□ 0.36
RTTNQ86VV8 AC087289.5-201ENST00000586076 3175 ntBASIC17.31■□□□□ 0.36
RTTNQ86VV8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTTNQ86VV8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTTNQ86VV8 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTTNQ86VV8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTTNQ86VV8 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTTNQ86VV8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTTNQ86VV8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.31■□□□□ 0.36
RTTNQ86VV8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTTNQ86VV8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTTNQ86VV8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.31■□□□□ 0.36
RTTNQ86VV8 POM121L13P-201ENST00000422362 380 ntBASIC17.31■□□□□ 0.36
RTTNQ86VV8 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
RTTNQ86VV8 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.31■□□□□ 0.36
RTTNQ86VV8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.31■□□□□ 0.36
RTTNQ86VV8 AC008403.3-201ENST00000598924 454 ntBASIC17.31■□□□□ 0.36
RTTNQ86VV8 AC020763.4-201ENST00000623414 4170 ntBASIC17.31■□□□□ 0.36
RTTNQ86VV8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.31■□□□□ 0.36
RTTNQ86VV8 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTTNQ86VV8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RTTNQ86VV8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.3■□□□□ 0.36
RTTNQ86VV8 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTTNQ86VV8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RTTNQ86VV8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.3■□□□□ 0.36
RTTNQ86VV8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RTTNQ86VV8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTTNQ86VV8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.3■□□□□ 0.36
RTTNQ86VV8 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
RTTNQ86VV8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTTNQ86VV8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms