Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.63■□□□□ 0.73
LDB1Q86U70 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.63■□□□□ 0.73
LDB1Q86U70 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.63■□□□□ 0.73
LDB1Q86U70 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.63■□□□□ 0.73
LDB1Q86U70 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
LDB1Q86U70 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.63■□□□□ 0.73
LDB1Q86U70 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
LDB1Q86U70 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LDB1Q86U70 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LDB1Q86U70 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.62■□□□□ 0.73
LDB1Q86U70 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
LDB1Q86U70 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LDB1Q86U70 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LDB1Q86U70 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.62■□□□□ 0.73
LDB1Q86U70 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LDB1Q86U70 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LDB1Q86U70 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
LDB1Q86U70 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.62■□□□□ 0.73
LDB1Q86U70 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LDB1Q86U70 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.62■□□□□ 0.73
LDB1Q86U70 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LDB1Q86U70 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.62■□□□□ 0.73
LDB1Q86U70 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LDB1Q86U70 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LDB1Q86U70 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.62■□□□□ 0.73
LDB1Q86U70 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.62■□□□□ 0.73
LDB1Q86U70 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.62■□□□□ 0.73
LDB1Q86U70 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.62■□□□□ 0.73
LDB1Q86U70 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LDB1Q86U70 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LDB1Q86U70 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.62■□□□□ 0.73
LDB1Q86U70 SOX15-203ENST00000570788 1093 ntBASIC19.62■□□□□ 0.73
LDB1Q86U70 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LDB1Q86U70 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LDB1Q86U70 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.62■□□□□ 0.73
LDB1Q86U70 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LDB1Q86U70 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LDB1Q86U70 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LDB1Q86U70 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.62■□□□□ 0.73
LDB1Q86U70 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LDB1Q86U70 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
LDB1Q86U70 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LDB1Q86U70 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
LDB1Q86U70 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LDB1Q86U70 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LDB1Q86U70 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LDB1Q86U70 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LDB1Q86U70 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LDB1Q86U70 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
LDB1Q86U70 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.61■□□□□ 0.73
LDB1Q86U70 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LDB1Q86U70 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LDB1Q86U70 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LDB1Q86U70 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.61■□□□□ 0.73
LDB1Q86U70 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.61■□□□□ 0.73
LDB1Q86U70 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.61■□□□□ 0.73
LDB1Q86U70 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LDB1Q86U70 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LDB1Q86U70 AC093484.2-201ENST00000580996 2166 ntBASIC19.61■□□□□ 0.73
LDB1Q86U70 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LDB1Q86U70 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.61■□□□□ 0.73
LDB1Q86U70 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LDB1Q86U70 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LDB1Q86U70 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
LDB1Q86U70 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LDB1Q86U70 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LDB1Q86U70 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LDB1Q86U70 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
LDB1Q86U70 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LDB1Q86U70 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.6■□□□□ 0.73
LDB1Q86U70 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LDB1Q86U70 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.6■□□□□ 0.73
LDB1Q86U70 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
LDB1Q86U70 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LDB1Q86U70 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LDB1Q86U70 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.6■□□□□ 0.73
LDB1Q86U70 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.6■□□□□ 0.73
LDB1Q86U70 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.6■□□□□ 0.73
LDB1Q86U70 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.6■□□□□ 0.73
LDB1Q86U70 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.6■□□□□ 0.73
LDB1Q86U70 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.6■□□□□ 0.73
LDB1Q86U70 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
LDB1Q86U70 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LDB1Q86U70 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.6■□□□□ 0.73
LDB1Q86U70 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LDB1Q86U70 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LDB1Q86U70 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
LDB1Q86U70 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LDB1Q86U70 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LDB1Q86U70 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LDB1Q86U70 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LDB1Q86U70 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
LDB1Q86U70 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LDB1Q86U70 TFP1-202ENST00000475455 1573 ntBASIC19.59■□□□□ 0.73
LDB1Q86U70 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
LDB1Q86U70 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
LDB1Q86U70 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LDB1Q86U70 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
LDB1Q86U70 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.59■□□□□ 0.73
LDB1Q86U70 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms