Protein–RNA interactions for Protein: Q68CR1

SEL1L3, Protein sel-1 homolog 3, humanhuman

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3Q68CR1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEL1L3Q68CR1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEL1L3Q68CR1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEL1L3Q68CR1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.05■□□□□ 0.8
SEL1L3Q68CR1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.05■□□□□ 0.8
SEL1L3Q68CR1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
SEL1L3Q68CR1 AC239809.2-201ENST00000415381 517 ntBASIC20.05■□□□□ 0.8
SEL1L3Q68CR1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.05■□□□□ 0.8
SEL1L3Q68CR1 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.05■□□□□ 0.8
SEL1L3Q68CR1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SEL1L3Q68CR1 AC124016.1-201ENST00000609552 612 ntBASIC20.05■□□□□ 0.8
SEL1L3Q68CR1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.05■□□□□ 0.8
SEL1L3Q68CR1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEL1L3Q68CR1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.05■□□□□ 0.8
SEL1L3Q68CR1 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEL1L3Q68CR1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
SEL1L3Q68CR1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEL1L3Q68CR1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SEL1L3Q68CR1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEL1L3Q68CR1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEL1L3Q68CR1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.05■□□□□ 0.8
SEL1L3Q68CR1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SEL1L3Q68CR1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEL1L3Q68CR1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SEL1L3Q68CR1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEL1L3Q68CR1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEL1L3Q68CR1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.05■□□□□ 0.8
SEL1L3Q68CR1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEL1L3Q68CR1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SEL1L3Q68CR1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEL1L3Q68CR1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.04■□□□□ 0.8
SEL1L3Q68CR1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SEL1L3Q68CR1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SEL1L3Q68CR1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SEL1L3Q68CR1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEL1L3Q68CR1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
SEL1L3Q68CR1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.04■□□□□ 0.8
SEL1L3Q68CR1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.04■□□□□ 0.8
SEL1L3Q68CR1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
SEL1L3Q68CR1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEL1L3Q68CR1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SEL1L3Q68CR1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.04■□□□□ 0.8
SEL1L3Q68CR1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEL1L3Q68CR1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEL1L3Q68CR1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEL1L3Q68CR1 AC092720.2-201ENST00000602388 1665 ntBASIC20.03■□□□□ 0.8
SEL1L3Q68CR1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SEL1L3Q68CR1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEL1L3Q68CR1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEL1L3Q68CR1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEL1L3Q68CR1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEL1L3Q68CR1 PTBP1P-201ENST00000554374 1601 ntBASIC20.03■□□□□ 0.8
SEL1L3Q68CR1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEL1L3Q68CR1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEL1L3Q68CR1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEL1L3Q68CR1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SEL1L3Q68CR1 KRASP1-201ENST00000407852 552 ntBASIC20.03■□□□□ 0.8
SEL1L3Q68CR1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEL1L3Q68CR1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.03■□□□□ 0.8
SEL1L3Q68CR1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.03■□□□□ 0.8
SEL1L3Q68CR1 Z99916.2-201ENST00000604037 246 ntBASIC20.03■□□□□ 0.8
SEL1L3Q68CR1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEL1L3Q68CR1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEL1L3Q68CR1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEL1L3Q68CR1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.02■□□□□ 0.8
SEL1L3Q68CR1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEL1L3Q68CR1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEL1L3Q68CR1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SEL1L3Q68CR1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.02■□□□□ 0.8
SEL1L3Q68CR1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.02■□□□□ 0.8
SEL1L3Q68CR1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SEL1L3Q68CR1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEL1L3Q68CR1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.02■□□□□ 0.8
SEL1L3Q68CR1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SEL1L3Q68CR1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SEL1L3Q68CR1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
SEL1L3Q68CR1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SEL1L3Q68CR1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEL1L3Q68CR1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEL1L3Q68CR1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEL1L3Q68CR1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SEL1L3Q68CR1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEL1L3Q68CR1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SEL1L3Q68CR1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEL1L3Q68CR1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SEL1L3Q68CR1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEL1L3Q68CR1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEL1L3Q68CR1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
SEL1L3Q68CR1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SEL1L3Q68CR1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SEL1L3Q68CR1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.01■□□□□ 0.79
SEL1L3Q68CR1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.01■□□□□ 0.79
SEL1L3Q68CR1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.01■□□□□ 0.79
SEL1L3Q68CR1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.01■□□□□ 0.79
SEL1L3Q68CR1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SEL1L3Q68CR1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
SEL1L3Q68CR1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEL1L3Q68CR1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
SEL1L3Q68CR1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SEL1L3Q68CR1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms