Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.55■■□□□ 1.04
CDKAL1Q5VV42 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.55■■□□□ 1.04
CDKAL1Q5VV42 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDKAL1Q5VV42 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDKAL1Q5VV42 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CDKAL1Q5VV42 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDKAL1Q5VV42 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDKAL1Q5VV42 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CDKAL1Q5VV42 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDKAL1Q5VV42 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDKAL1Q5VV42 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDKAL1Q5VV42 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.54■■□□□ 1.04
CDKAL1Q5VV42 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CDKAL1Q5VV42 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDKAL1Q5VV42 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDKAL1Q5VV42 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.54■■□□□ 1.04
CDKAL1Q5VV42 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.54■■□□□ 1.04
CDKAL1Q5VV42 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDKAL1Q5VV42 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDKAL1Q5VV42 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.54■■□□□ 1.04
CDKAL1Q5VV42 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CDKAL1Q5VV42 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDKAL1Q5VV42 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
CDKAL1Q5VV42 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.54■■□□□ 1.04
CDKAL1Q5VV42 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.54■■□□□ 1.04
CDKAL1Q5VV42 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDKAL1Q5VV42 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDKAL1Q5VV42 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDKAL1Q5VV42 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDKAL1Q5VV42 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDKAL1Q5VV42 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDKAL1Q5VV42 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.54■■□□□ 1.04
CDKAL1Q5VV42 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDKAL1Q5VV42 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.53■■□□□ 1.04
CDKAL1Q5VV42 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.53■■□□□ 1.04
CDKAL1Q5VV42 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDKAL1Q5VV42 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.53■■□□□ 1.04
CDKAL1Q5VV42 TFP1-202ENST00000475455 1573 ntBASIC21.53■■□□□ 1.04
CDKAL1Q5VV42 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDKAL1Q5VV42 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDKAL1Q5VV42 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.53■■□□□ 1.04
CDKAL1Q5VV42 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDKAL1Q5VV42 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.53■■□□□ 1.04
CDKAL1Q5VV42 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CDKAL1Q5VV42 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
CDKAL1Q5VV42 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.53■■□□□ 1.04
CDKAL1Q5VV42 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDKAL1Q5VV42 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDKAL1Q5VV42 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CDKAL1Q5VV42 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.53■■□□□ 1.04
CDKAL1Q5VV42 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CDKAL1Q5VV42 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDKAL1Q5VV42 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDKAL1Q5VV42 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDKAL1Q5VV42 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDKAL1Q5VV42 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDKAL1Q5VV42 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.52■■□□□ 1.04
CDKAL1Q5VV42 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDKAL1Q5VV42 LSM12P1-201ENST00000411836 588 ntBASIC21.52■■□□□ 1.04
CDKAL1Q5VV42 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDKAL1Q5VV42 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDKAL1Q5VV42 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDKAL1Q5VV42 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CDKAL1Q5VV42 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDKAL1Q5VV42 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDKAL1Q5VV42 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDKAL1Q5VV42 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.52■■□□□ 1.04
CDKAL1Q5VV42 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDKAL1Q5VV42 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDKAL1Q5VV42 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.52■■□□□ 1.03
CDKAL1Q5VV42 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDKAL1Q5VV42 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDKAL1Q5VV42 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDKAL1Q5VV42 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.51■■□□□ 1.03
CDKAL1Q5VV42 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDKAL1Q5VV42 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDKAL1Q5VV42 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.51■■□□□ 1.03
CDKAL1Q5VV42 AC022517.1-201ENST00000592429 346 ntBASIC21.51■■□□□ 1.03
CDKAL1Q5VV42 AL050303.2-201ENST00000619798 666 ntBASIC21.51■■□□□ 1.03
CDKAL1Q5VV42 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDKAL1Q5VV42 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDKAL1Q5VV42 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.51■■□□□ 1.03
CDKAL1Q5VV42 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CDKAL1Q5VV42 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
CDKAL1Q5VV42 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDKAL1Q5VV42 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDKAL1Q5VV42 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDKAL1Q5VV42 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CDKAL1Q5VV42 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.5■■□□□ 1.03
CDKAL1Q5VV42 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.5■■□□□ 1.03
CDKAL1Q5VV42 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDKAL1Q5VV42 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CDKAL1Q5VV42 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CDKAL1Q5VV42 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
CDKAL1Q5VV42 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDKAL1Q5VV42 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDKAL1Q5VV42 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDKAL1Q5VV42 AL161938.1-201ENST00000569833 2180 ntBASIC21.5■■□□□ 1.03
CDKAL1Q5VV42 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDKAL1Q5VV42 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms