Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RC3H1Q5TC82 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
RC3H1Q5TC82 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
RC3H1Q5TC82 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC24.91■■□□□ 1.58
RC3H1Q5TC82 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC24.91■■□□□ 1.58
RC3H1Q5TC82 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC24.91■■□□□ 1.58
RC3H1Q5TC82 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RC3H1Q5TC82 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
RC3H1Q5TC82 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RC3H1Q5TC82 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RC3H1Q5TC82 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
RC3H1Q5TC82 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC24.91■■□□□ 1.58
RC3H1Q5TC82 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC24.91■■□□□ 1.58
RC3H1Q5TC82 AL121894.2-201ENST00000602977 491 ntBASIC24.91■■□□□ 1.58
RC3H1Q5TC82 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC24.91■■□□□ 1.58
RC3H1Q5TC82 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RC3H1Q5TC82 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RC3H1Q5TC82 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RC3H1Q5TC82 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RC3H1Q5TC82 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.9■■□□□ 1.58
RC3H1Q5TC82 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC24.9■■□□□ 1.58
RC3H1Q5TC82 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
RC3H1Q5TC82 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RC3H1Q5TC82 KRT8P8-201ENST00000434750 1448 ntBASIC24.9■■□□□ 1.58
RC3H1Q5TC82 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RC3H1Q5TC82 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
RC3H1Q5TC82 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC24.9■■□□□ 1.58
RC3H1Q5TC82 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
RC3H1Q5TC82 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC24.9■■□□□ 1.58
RC3H1Q5TC82 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC24.9■■□□□ 1.58
RC3H1Q5TC82 AC007225.1-201ENST00000566331 1836 ntBASIC24.9■■□□□ 1.58
RC3H1Q5TC82 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.9■■□□□ 1.58
RC3H1Q5TC82 AC006128.1-201ENST00000624704 1661 ntBASIC24.9■■□□□ 1.58
RC3H1Q5TC82 IER3-202ENST00000376377 1350 ntBASIC24.9■■□□□ 1.58
RC3H1Q5TC82 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC24.9■■□□□ 1.58
RC3H1Q5TC82 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC24.89■■□□□ 1.58
RC3H1Q5TC82 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC24.89■■□□□ 1.58
RC3H1Q5TC82 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC24.89■■□□□ 1.58
RC3H1Q5TC82 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
RC3H1Q5TC82 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.89■■□□□ 1.58
RC3H1Q5TC82 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
RC3H1Q5TC82 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
RC3H1Q5TC82 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
RC3H1Q5TC82 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC24.89■■□□□ 1.58
RC3H1Q5TC82 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC24.89■■□□□ 1.58
RC3H1Q5TC82 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC24.89■■□□□ 1.58
RC3H1Q5TC82 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC24.89■■□□□ 1.58
RC3H1Q5TC82 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC24.89■■□□□ 1.58
RC3H1Q5TC82 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC24.89■■□□□ 1.58
RC3H1Q5TC82 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC24.89■■□□□ 1.57
RC3H1Q5TC82 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC24.89■■□□□ 1.57
RC3H1Q5TC82 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.57
RC3H1Q5TC82 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
RC3H1Q5TC82 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC24.88■■□□□ 1.57
RC3H1Q5TC82 AC092720.2-201ENST00000602388 1665 ntBASIC24.88■■□□□ 1.57
RC3H1Q5TC82 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC24.88■■□□□ 1.57
RC3H1Q5TC82 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RC3H1Q5TC82 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC24.88■■□□□ 1.57
RC3H1Q5TC82 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RC3H1Q5TC82 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RC3H1Q5TC82 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RC3H1Q5TC82 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC24.88■■□□□ 1.57
RC3H1Q5TC82 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RC3H1Q5TC82 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC24.88■■□□□ 1.57
RC3H1Q5TC82 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC24.88■■□□□ 1.57
RC3H1Q5TC82 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC24.88■■□□□ 1.57
RC3H1Q5TC82 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC24.88■■□□□ 1.57
RC3H1Q5TC82 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC24.88■■□□□ 1.57
RC3H1Q5TC82 AL441883.1-201ENST00000566170 1045 ntBASIC24.88■■□□□ 1.57
RC3H1Q5TC82 AC008622.2-201ENST00000617006 1229 ntBASIC24.88■■□□□ 1.57
RC3H1Q5TC82 AC116407.4-201ENST00000623319 1061 ntBASIC24.88■■□□□ 1.57
RC3H1Q5TC82 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC24.88■■□□□ 1.57
RC3H1Q5TC82 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RC3H1Q5TC82 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RC3H1Q5TC82 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RC3H1Q5TC82 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC24.87■■□□□ 1.57
RC3H1Q5TC82 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RC3H1Q5TC82 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RC3H1Q5TC82 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC24.87■■□□□ 1.57
RC3H1Q5TC82 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RC3H1Q5TC82 DUSP5P1-201ENST00000441325 1139 ntBASIC24.87■■□□□ 1.57
RC3H1Q5TC82 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RC3H1Q5TC82 NME1-207ENST00000480143 964 ntTSL 2 BASIC24.87■■□□□ 1.57
RC3H1Q5TC82 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
RC3H1Q5TC82 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RC3H1Q5TC82 BID-203ENST00000399765 1879 ntTSL 2 BASIC24.87■■□□□ 1.57
RC3H1Q5TC82 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RC3H1Q5TC82 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
RC3H1Q5TC82 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RC3H1Q5TC82 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
RC3H1Q5TC82 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
RC3H1Q5TC82 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RC3H1Q5TC82 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RC3H1Q5TC82 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC24.86■■□□□ 1.57
RC3H1Q5TC82 AL671277.2-201ENST00000458060 996 ntBASIC24.86■■□□□ 1.57
RC3H1Q5TC82 PRSS44-201ENST00000515154 1146 ntBASIC24.86■■□□□ 1.57
RC3H1Q5TC82 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC24.86■■□□□ 1.57
RC3H1Q5TC82 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC24.86■■□□□ 1.57
RC3H1Q5TC82 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC24.86■■□□□ 1.57
RC3H1Q5TC82 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC24.86■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms