Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RSPO4Q2I0M5 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RSPO4Q2I0M5 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RSPO4Q2I0M5 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
RSPO4Q2I0M5 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.12■□□□□ 0.65
RSPO4Q2I0M5 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RSPO4Q2I0M5 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RSPO4Q2I0M5 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.12■□□□□ 0.65
RSPO4Q2I0M5 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
RSPO4Q2I0M5 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.12■□□□□ 0.65
RSPO4Q2I0M5 AL353719.1-201ENST00000566847 864 ntBASIC19.12■□□□□ 0.65
RSPO4Q2I0M5 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RSPO4Q2I0M5 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.12■□□□□ 0.65
RSPO4Q2I0M5 AL031008.1-201ENST00000619963 541 ntBASIC19.12■□□□□ 0.65
RSPO4Q2I0M5 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RSPO4Q2I0M5 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RSPO4Q2I0M5 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RSPO4Q2I0M5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.12■□□□□ 0.65
RSPO4Q2I0M5 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RSPO4Q2I0M5 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RSPO4Q2I0M5 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RSPO4Q2I0M5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RSPO4Q2I0M5 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RSPO4Q2I0M5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.11■□□□□ 0.65
RSPO4Q2I0M5 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RSPO4Q2I0M5 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RSPO4Q2I0M5 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
RSPO4Q2I0M5 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
RSPO4Q2I0M5 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RSPO4Q2I0M5 KRT18P13-201ENST00000400056 1290 ntBASIC19.11■□□□□ 0.65
RSPO4Q2I0M5 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.11■□□□□ 0.65
RSPO4Q2I0M5 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.11■□□□□ 0.65
RSPO4Q2I0M5 EMBP1-201ENST00000458200 901 ntBASIC19.11■□□□□ 0.65
RSPO4Q2I0M5 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.11■□□□□ 0.65
RSPO4Q2I0M5 AC079776.4-201ENST00000511039 504 ntBASIC19.11■□□□□ 0.65
RSPO4Q2I0M5 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.11■□□□□ 0.65
RSPO4Q2I0M5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.11■□□□□ 0.65
RSPO4Q2I0M5 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.11■□□□□ 0.65
RSPO4Q2I0M5 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RSPO4Q2I0M5 IFNL4P1-201ENST00000607083 540 ntBASIC19.11■□□□□ 0.65
RSPO4Q2I0M5 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RSPO4Q2I0M5 HYMAI.1-201ENST00000620949 238 ntBASIC19.11■□□□□ 0.65
RSPO4Q2I0M5 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RSPO4Q2I0M5 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RSPO4Q2I0M5 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
RSPO4Q2I0M5 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RSPO4Q2I0M5 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RSPO4Q2I0M5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RSPO4Q2I0M5 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RSPO4Q2I0M5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RSPO4Q2I0M5 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RSPO4Q2I0M5 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RSPO4Q2I0M5 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
RSPO4Q2I0M5 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RSPO4Q2I0M5 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RSPO4Q2I0M5 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.1■□□□□ 0.65
RSPO4Q2I0M5 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.1■□□□□ 0.65
RSPO4Q2I0M5 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RSPO4Q2I0M5 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RSPO4Q2I0M5 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.1■□□□□ 0.65
RSPO4Q2I0M5 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.1■□□□□ 0.65
RSPO4Q2I0M5 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.1■□□□□ 0.65
RSPO4Q2I0M5 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.1■□□□□ 0.65
RSPO4Q2I0M5 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RSPO4Q2I0M5 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.1■□□□□ 0.65
RSPO4Q2I0M5 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RSPO4Q2I0M5 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RSPO4Q2I0M5 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RSPO4Q2I0M5 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RSPO4Q2I0M5 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RSPO4Q2I0M5 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RSPO4Q2I0M5 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RSPO4Q2I0M5 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RSPO4Q2I0M5 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RSPO4Q2I0M5 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.09■□□□□ 0.65
RSPO4Q2I0M5 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RSPO4Q2I0M5 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RSPO4Q2I0M5 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RSPO4Q2I0M5 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RSPO4Q2I0M5 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.09■□□□□ 0.65
RSPO4Q2I0M5 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RSPO4Q2I0M5 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.09■□□□□ 0.65
RSPO4Q2I0M5 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RSPO4Q2I0M5 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.09■□□□□ 0.65
RSPO4Q2I0M5 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.09■□□□□ 0.65
RSPO4Q2I0M5 AL160237.2-201ENST00000556165 472 ntBASIC19.09■□□□□ 0.65
RSPO4Q2I0M5 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.09■□□□□ 0.65
RSPO4Q2I0M5 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
RSPO4Q2I0M5 AC117500.6-201ENST00000624871 588 ntBASIC19.09■□□□□ 0.65
RSPO4Q2I0M5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.09■□□□□ 0.65
RSPO4Q2I0M5 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RSPO4Q2I0M5 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RSPO4Q2I0M5 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
RSPO4Q2I0M5 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RSPO4Q2I0M5 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RSPO4Q2I0M5 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RSPO4Q2I0M5 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RSPO4Q2I0M5 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RSPO4Q2I0M5 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RSPO4Q2I0M5 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms