Protein–RNA interactions for Protein: P78414

IRX1, Iroquois-class homeodomain protein IRX-1, humanhuman

Predicted RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX1P78414 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IRX1P78414 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
IRX1P78414 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IRX1P78414 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
IRX1P78414 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.29■□□□□ 0.68
IRX1P78414 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IRX1P78414 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.29■□□□□ 0.68
IRX1P78414 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
IRX1P78414 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IRX1P78414 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.28■□□□□ 0.68
IRX1P78414 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.28■□□□□ 0.68
IRX1P78414 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IRX1P78414 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
IRX1P78414 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
IRX1P78414 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX1P78414 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX1P78414 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.28■□□□□ 0.68
IRX1P78414 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IRX1P78414 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.28■□□□□ 0.68
IRX1P78414 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IRX1P78414 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX1P78414 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX1P78414 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.28■□□□□ 0.68
IRX1P78414 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.28■□□□□ 0.68
IRX1P78414 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.28■□□□□ 0.68
IRX1P78414 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX1P78414 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX1P78414 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IRX1P78414 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX1P78414 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
IRX1P78414 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.28■□□□□ 0.68
IRX1P78414 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.28■□□□□ 0.68
IRX1P78414 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX1P78414 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.28■□□□□ 0.68
IRX1P78414 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
IRX1P78414 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.27■□□□□ 0.68
IRX1P78414 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
IRX1P78414 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
IRX1P78414 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX1P78414 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX1P78414 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX1P78414 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX1P78414 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX1P78414 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
IRX1P78414 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX1P78414 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.27■□□□□ 0.68
IRX1P78414 AC026271.2-201ENST00000428091 497 ntBASIC19.27■□□□□ 0.68
IRX1P78414 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.27■□□□□ 0.68
IRX1P78414 AC104187.1-201ENST00000607510 612 ntBASIC19.27■□□□□ 0.68
IRX1P78414 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX1P78414 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX1P78414 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.27■□□□□ 0.68
IRX1P78414 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
IRX1P78414 LINC02228-203ENST00000641970 1355 ntBASIC19.27■□□□□ 0.68
IRX1P78414 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.27■□□□□ 0.68
IRX1P78414 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
IRX1P78414 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.27■□□□□ 0.67
IRX1P78414 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
IRX1P78414 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.27■□□□□ 0.67
IRX1P78414 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
IRX1P78414 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
IRX1P78414 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
IRX1P78414 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.26■□□□□ 0.67
IRX1P78414 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IRX1P78414 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
IRX1P78414 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.26■□□□□ 0.67
IRX1P78414 TNRC18P3-201ENST00000441896 2691 ntBASIC19.26■□□□□ 0.67
IRX1P78414 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IRX1P78414 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
IRX1P78414 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
IRX1P78414 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.26■□□□□ 0.67
IRX1P78414 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IRX1P78414 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.26■□□□□ 0.67
IRX1P78414 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
IRX1P78414 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
IRX1P78414 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IRX1P78414 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IRX1P78414 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
IRX1P78414 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.26■□□□□ 0.67
IRX1P78414 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.26■□□□□ 0.67
IRX1P78414 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IRX1P78414 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
IRX1P78414 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IRX1P78414 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX1P78414 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IRX1P78414 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.25■□□□□ 0.67
IRX1P78414 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
IRX1P78414 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IRX1P78414 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX1P78414 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX1P78414 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
IRX1P78414 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
IRX1P78414 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX1P78414 PRORSD1P-202ENST00000563365 2154 ntBASIC19.25■□□□□ 0.67
IRX1P78414 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX1P78414 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IRX1P78414 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IRX1P78414 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.25■□□□□ 0.67
IRX1P78414 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.25■□□□□ 0.67
IRX1P78414 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms