Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBA52P62987 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBA52P62987 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBA52P62987 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBA52P62987 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
UBA52P62987 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBA52P62987 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBA52P62987 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
UBA52P62987 AC005332.7-201ENST00000614046 2005 ntBASIC16.91■□□□□ 0.3
UBA52P62987 AC093503.3-201ENST00000624917 2352 ntBASIC16.91■□□□□ 0.3
UBA52P62987 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.9■□□□□ 0.3
UBA52P62987 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBA52P62987 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
UBA52P62987 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBA52P62987 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
UBA52P62987 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UBA52P62987 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
UBA52P62987 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBA52P62987 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
UBA52P62987 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBA52P62987 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBA52P62987 AC097658.1-201ENST00000475555 843 ntBASIC16.9■□□□□ 0.3
UBA52P62987 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
UBA52P62987 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.9■□□□□ 0.3
UBA52P62987 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.9■□□□□ 0.3
UBA52P62987 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.9■□□□□ 0.3
UBA52P62987 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.9■□□□□ 0.3
UBA52P62987 AC083880.1-201ENST00000608266 535 ntBASIC16.9■□□□□ 0.3
UBA52P62987 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.9■□□□□ 0.3
UBA52P62987 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBA52P62987 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBA52P62987 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBA52P62987 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBA52P62987 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.9■□□□□ 0.3
UBA52P62987 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBA52P62987 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.9■□□□□ 0.3
UBA52P62987 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UBA52P62987 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UBA52P62987 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
UBA52P62987 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
UBA52P62987 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
UBA52P62987 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.89■□□□□ 0.3
UBA52P62987 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
UBA52P62987 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UBA52P62987 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.89■□□□□ 0.29
UBA52P62987 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UBA52P62987 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBA52P62987 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBA52P62987 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UBA52P62987 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBA52P62987 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UBA52P62987 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBA52P62987 POU5F1P4-201ENST00000413175 1085 ntBASIC16.89■□□□□ 0.29
UBA52P62987 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.89■□□□□ 0.29
UBA52P62987 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.89■□□□□ 0.29
UBA52P62987 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.89■□□□□ 0.29
UBA52P62987 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.89■□□□□ 0.29
UBA52P62987 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UBA52P62987 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.89■□□□□ 0.29
UBA52P62987 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.89■□□□□ 0.29
UBA52P62987 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.89■□□□□ 0.29
UBA52P62987 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.89■□□□□ 0.29
UBA52P62987 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.89■□□□□ 0.29
UBA52P62987 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBA52P62987 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBA52P62987 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
UBA52P62987 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.89■□□□□ 0.29
UBA52P62987 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
UBA52P62987 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.89■□□□□ 0.29
UBA52P62987 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBA52P62987 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBA52P62987 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
UBA52P62987 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBA52P62987 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBA52P62987 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBA52P62987 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBA52P62987 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UBA52P62987 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
UBA52P62987 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.88■□□□□ 0.29
UBA52P62987 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBA52P62987 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBA52P62987 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBA52P62987 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UBA52P62987 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
UBA52P62987 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBA52P62987 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBA52P62987 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBA52P62987 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.88■□□□□ 0.29
UBA52P62987 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
UBA52P62987 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
UBA52P62987 ESRRAP1-201ENST00000400596 1257 ntBASIC16.88■□□□□ 0.29
UBA52P62987 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.88■□□□□ 0.29
UBA52P62987 RPS2P52-201ENST00000469610 820 ntBASIC16.88■□□□□ 0.29
UBA52P62987 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.88■□□□□ 0.29
UBA52P62987 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UBA52P62987 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UBA52P62987 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UBA52P62987 MYC-209ENST00000641252 345 ntBASIC16.88■□□□□ 0.29
UBA52P62987 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBA52P62987 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms